RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 LINC00596Q86U02 117 aa12.02□□□□□ -0.48
CTR9-201ENST00000361367 BAP18Q8IXM2 172 aa12.02□□□□□ -0.48
CTR9-201ENST00000361367 SPICQ8N5J4 248 aa12.02□□□□□ -0.48
CTR9-201ENST00000361367 ADTRPQ96IZ2 230 aa12.02□□□□□ -0.48
CTR9-201ENST00000361367 PRDM14Q9GZV8 571 aa12.02□□□□□ -0.48
CTR9-201ENST00000361367 CDK2AP1O14519 115 aa12.02□□□□□ -0.49
CTR9-201ENST00000361367 SCAF4O95104 1147 aaKnown RBP12.02□□□□□ -0.49
CTR9-201ENST00000361367 PPYP01298 95 aa12.02□□□□□ -0.49
CTR9-201ENST00000361367 CTSDP07339 412 aaPredicted RBP12.02□□□□□ -0.49
CTR9-201ENST00000361367 UBE2KP61086 200 aa12.02□□□□□ -0.49
CTR9-201ENST00000361367 C19orf57Q0VDD7 668 aa12.02□□□□□ -0.49
CTR9-201ENST00000361367 SURF2Q15527 256 aaPredicted RBP12.02□□□□□ -0.49
CTR9-201ENST00000361367 SLC25A53Q5H9E4 307 aa12.02□□□□□ -0.49
CTR9-201ENST00000361367 DYRK2Q92630 601 aa12.02□□□□□ -0.49
CTR9-201ENST00000361367 RTN4RQ9BZR6 473 aa12.02□□□□□ -0.49
CTR9-201ENST00000361367 DEPPQ9NTK1 212 aa12.02□□□□□ -0.49
CTR9-201ENST00000361367 RNF115Q9Y4L5 304 aa12.02□□□□□ -0.49
CTR9-201ENST00000361367 A0A1W2PP11 408 aa12.02□□□□□ -0.49
CTR9-201ENST00000361367 LMX1BO60663 402 aa12.02□□□□□ -0.49
CTR9-201ENST00000361367 COX6B1P14854 86 aa12.02□□□□□ -0.49
CTR9-201ENST00000361367 RPL31P62899 125 aaKnown RBP12.02□□□□□ -0.49
CTR9-201ENST00000361367 ZBTB37Q5TC79 503 aa12.02□□□□□ -0.49
CTR9-201ENST00000361367 LILRB4Q8NHJ6 448 aa12.02□□□□□ -0.49
CTR9-201ENST00000361367 KLF14Q8TD94 323 aaPredicted RBP12.02□□□□□ -0.49
CTR9-201ENST00000361367 CA10Q9NS85 328 aa12.02□□□□□ -0.49
CTR9-201ENST00000361367 RASL12Q9NYN1 266 aa12.02□□□□□ -0.49
CTR9-201ENST00000361367 SEMA5BQ9P283 1151 aa12.02□□□□□ -0.49
CTR9-201ENST00000361367 CACNG5Q9UF02 275 aa12.02□□□□□ -0.49
CTR9-201ENST00000361367 MRPS18CQ9Y3D5 142 aaKnown RBP12.02□□□□□ -0.49
CTR9-201ENST00000361367 AKAP6Q13023 2319 aa12.02□□□□□ -0.49
CTR9-201ENST00000361367 SVBPQ8N300 66 aa12.01□□□□□ -0.49
CTR9-201ENST00000361367 TMEM104Q8NE00 496 aa12.01□□□□□ -0.49
CTR9-201ENST00000361367 OR8G5Q8NG78 346 aa12.01□□□□□ -0.49
CTR9-201ENST00000361367 ZMIZ1Q9ULJ6 1067 aa12.01□□□□□ -0.49
CTR9-201ENST00000361367 RPL36A-HNRNPH2H7BZ11 118 aa12.01□□□□□ -0.49
CTR9-201ENST00000361367 HLA-DRB3P79483 266 aa12.01□□□□□ -0.49
CTR9-201ENST00000361367 LCN15Q6UWW0 184 aa12.01□□□□□ -0.49
CTR9-201ENST00000361367 ZNF826PQ6ZT77 177 aa12.01□□□□□ -0.49
CTR9-201ENST00000361367 LFNGQ8NES3 379 aa12.01□□□□□ -0.49
CTR9-201ENST00000361367 SSX3Q99909 188 aa12.01□□□□□ -0.49
CTR9-201ENST00000361367 HEXA-AS1Q9H8Q6 139 aa12.01□□□□□ -0.49
CTR9-201ENST00000361367 SLC35D1Q9NTN3 355 aa12.01□□□□□ -0.49
CTR9-201ENST00000361367 NEURL1O76050 574 aa12.01□□□□□ -0.49
CTR9-201ENST00000361367 ACKR3P25106 362 aa12.01□□□□□ -0.49
CTR9-201ENST00000361367 LAIR2Q6ISS4 152 aa12.01□□□□□ -0.49
CTR9-201ENST00000361367 TMEM230Q96A57 120 aa12.01□□□□□ -0.49
CTR9-201ENST00000361367 ACY3Q96HD9 319 aa12.01□□□□□ -0.49
CTR9-201ENST00000361367 SSX4O60224 188 aa12.01□□□□□ -0.49
CTR9-201ENST00000361367 SRP14P37108 136 aaKnown RBP12.01□□□□□ -0.49
CTR9-201ENST00000361367 FGF12P61328 243 aa12.01□□□□□ -0.49
CTR9-201ENST00000361367 GGNBP1Q5YKI7 109 aa12.01□□□□□ -0.49
CTR9-201ENST00000361367 C11orf87Q6NUJ2 197 aa12.01□□□□□ -0.49
CTR9-201ENST00000361367 SHISA5Q8N114 240 aa12.01□□□□□ -0.49
CTR9-201ENST00000361367 OR4S2Q8NH73 311 aa12.01□□□□□ -0.49
CTR9-201ENST00000361367 HDHD3Q9BSH5 251 aaPredicted RBP12.01□□□□□ -0.49
CTR9-201ENST00000361367 RNF122Q9H9V4 155 aa12.01□□□□□ -0.49
CTR9-201ENST00000361367 NEUROG3Q9Y4Z2 214 aa12.01□□□□□ -0.49
CTR9-201ENST00000361367 NUPL2O15504 423 aaKnown RBP12□□□□□ -0.49
CTR9-201ENST00000361367 ARL3P36405 182 aa12□□□□□ -0.49
CTR9-201ENST00000361367 IL13RA2Q14627 380 aa12□□□□□ -0.49
CTR9-201ENST00000361367 FAM57AQ8TBR7 257 aa12□□□□□ -0.49
CTR9-201ENST00000361367 LHX4Q969G2 390 aa12□□□□□ -0.49
CTR9-201ENST00000361367 MARC2Q969Z3 335 aa12□□□□□ -0.49
CTR9-201ENST00000361367 SLC25A10Q9UBX3 287 aaPredicted RBP12□□□□□ -0.49
CTR9-201ENST00000361367 ZNF107Q9UII5 783 aaPredicted RBP12□□□□□ -0.49
CTR9-201ENST00000361367 CRYZL1O95825 349 aa12□□□□□ -0.49
CTR9-201ENST00000361367 TAS2R45P59539 299 aa12□□□□□ -0.49
CTR9-201ENST00000361367 FAM74A1Q5RGS3 127 aa12□□□□□ -0.49
CTR9-201ENST00000361367 CD200R1LQ6Q8B3 271 aa12□□□□□ -0.49
CTR9-201ENST00000361367 LPAR2Q9HBW0 351 aa12□□□□□ -0.49
CTR9-201ENST00000361367 G6PC2Q9NQR9 355 aa12□□□□□ -0.49
CTR9-201ENST00000361367 IGKV1D-43A0A0B4J1Z2 117 aa12□□□□□ -0.49
CTR9-201ENST00000361367 ONECUT2O95948 504 aa12□□□□□ -0.49
CTR9-201ENST00000361367 COX5AP20674 150 aa12□□□□□ -0.49
CTR9-201ENST00000361367 KIR2DS2P43631 304 aa12□□□□□ -0.49
CTR9-201ENST00000361367 COL10A1Q03692 680 aa12□□□□□ -0.49
CTR9-201ENST00000361367 FAM27E3Q08E93 113 aa12□□□□□ -0.49
CTR9-201ENST00000361367 TPRX1Q8N7U7 411 aa12□□□□□ -0.49
CTR9-201ENST00000361367 DUSP18Q8NEJ0 188 aa12□□□□□ -0.49
CTR9-201ENST00000361367 CCL13Q99616 98 aa12□□□□□ -0.49
CTR9-201ENST00000361367 HIF1ANQ9NWT6 349 aa12□□□□□ -0.49
CTR9-201ENST00000361367 ATPIF1Q9UII2 106 aa12□□□□□ -0.49
CTR9-201ENST00000361367 KLK13Q9UKR3 277 aa12□□□□□ -0.49
CTR9-201ENST00000361367 KCNMB2Q9Y691 235 aa12□□□□□ -0.49
CTR9-201ENST00000361367 TSC2P49815 1807 aa12□□□□□ -0.49
CTR9-201ENST00000361367 DHRS7CA6NNS2 312 aa11.99□□□□□ -0.49
CTR9-201ENST00000361367 ACOT6Q3I5F7 207 aaPredicted RBP11.99□□□□□ -0.49
CTR9-201ENST00000361367 TIMM23BQ5SRD1 257 aa11.99□□□□□ -0.49
CTR9-201ENST00000361367 BMPERQ8N8U9 685 aa11.99□□□□□ -0.49
CTR9-201ENST00000361367 ZNF485Q8NCK3 441 aa11.99□□□□□ -0.49
CTR9-201ENST00000361367 CCL28Q9NRJ3 127 aa11.99□□□□□ -0.49
CTR9-201ENST00000361367 PTPRDP23468 1912 aa11.99□□□□□ -0.49
CTR9-201ENST00000361367 IGLV3-32A0A0A0MS00 114 aa11.99□□□□□ -0.49
CTR9-201ENST00000361367 ICMTO60725 284 aa11.99□□□□□ -0.49
CTR9-201ENST00000361367 FNDC7Q5VTL7 733 aa11.99□□□□□ -0.49
CTR9-201ENST00000361367 TBC1D26Q86UD7 250 aa11.99□□□□□ -0.49
CTR9-201ENST00000361367 TCTE3Q8IZS6 198 aa11.99□□□□□ -0.49
CTR9-201ENST00000361367 WDYHV1Q96HA8 205 aa11.99□□□□□ -0.49
CTR9-201ENST00000361367 NIPSNAP3BQ9BS92 247 aa11.99□□□□□ -0.49
CTR9-201ENST00000361367 ZDHHC8Q9ULC8 765 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms