RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 IGKV1D-12P01611 117 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 APOC3P02656 99 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 PATE4P0C8F1 98 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 DTYMKP23919 212 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 RGS19P49795 217 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 RBP2P50120 134 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 FAM3AP98173 230 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 RBM39Q14498 530 aaKnown RBP6.27□□□□□ -1.41
CLCN3-202ENST00000360642 ACER2Q5QJU3 275 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 DCAF12Q5T6F0 453 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 BOLLQ8N9W6 283 aaKnown RBP6.27□□□□□ -1.41
CLCN3-202ENST00000360642 OR51F2Q8NH61 342 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 AKR7LQ8NHP1 331 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 FAM110DQ8TAY7 271 aaPredicted RBP6.27□□□□□ -1.41
CLCN3-202ENST00000360642 CPNE2Q96FN4 548 aaPredicted RBP6.27□□□□□ -1.41
CLCN3-202ENST00000360642 ALKBH3Q96Q83 286 aaPredicted RBP6.27□□□□□ -1.41
CLCN3-202ENST00000360642 FAAP24Q9BTP7 215 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 OR2H1Q9GZK4 316 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 WNT5BQ9H1J7 359 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 RGCCQ9H4X1 137 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 FAM30AQ9NZY2 134 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 AK3Q9UIJ7 227 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 C14orf166Q9Y224 244 aaKnown RBP6.27□□□□□ -1.41
CLCN3-202ENST00000360642 CFAP47Q6ZTR5 3102 aa6.26□□□□□ -1.41
CLCN3-202ENST00000360642 hCG_38984A0A1B0GV85 526 aa6.26□□□□□ -1.41
CLCN3-202ENST00000360642 FAM230AA0A1W2PPH8 454 aa6.26□□□□□ -1.41
CLCN3-202ENST00000360642 PINLYPA6NC86 204 aa6.26□□□□□ -1.41
CLCN3-202ENST00000360642 DNASE2O00115 360 aaPredicted RBP6.26□□□□□ -1.41
CLCN3-202ENST00000360642 LAMTOR5O43504 91 aa6.26□□□□□ -1.41
CLCN3-202ENST00000360642 CYTIPO60759 359 aa6.26□□□□□ -1.41
CLCN3-202ENST00000360642 F10P00742 488 aa6.26□□□□□ -1.41
CLCN3-202ENST00000360642 NRASP01111 189 aa6.26□□□□□ -1.41
CLCN3-202ENST00000360642 LCATP04180 440 aa6.26□□□□□ -1.41
CLCN3-202ENST00000360642 C1QTNF9P0C862 333 aa6.26□□□□□ -1.41
CLCN3-202ENST00000360642 CHATP28329 748 aa6.26□□□□□ -1.41
CLCN3-202ENST00000360642 OTX2P32243 289 aa6.26□□□□□ -1.41
CLCN3-202ENST00000360642 RSU1Q15404 277 aa6.26□□□□□ -1.41
CLCN3-202ENST00000360642 OR8B8Q15620 311 aa6.26□□□□□ -1.41
CLCN3-202ENST00000360642 TAF9Q16594 264 aa6.26□□□□□ -1.41
CLCN3-202ENST00000360642 CXorf66Q5JRM2 361 aaPredicted RBP6.26□□□□□ -1.41
CLCN3-202ENST00000360642 DBX2Q6ZNG2 339 aa6.26□□□□□ -1.41
CLCN3-202ENST00000360642 TIPARPQ7Z3E1 657 aaKnown RBP6.26□□□□□ -1.41
CLCN3-202ENST00000360642 CCDC36Q8IYA8 594 aa6.26□□□□□ -1.41
CLCN3-202ENST00000360642 PSMF1Q92530 271 aa6.26□□□□□ -1.41
CLCN3-202ENST00000360642 C1orf123Q9NWV4 160 aa6.26□□□□□ -1.41
CLCN3-202ENST00000360642 IL36GQ9NZH8 169 aa6.26□□□□□ -1.41
CLCN3-202ENST00000360642 PRRC2CQ9Y520 2896 aaKnown RBP6.26□□□□□ -1.41
CLCN3-202ENST00000360642 CXorf65A6NEN9 183 aa6.26□□□□□ -1.41
CLCN3-202ENST00000360642 MBD3L5A6NJ08 208 aaPredicted RBP6.26□□□□□ -1.41
CLCN3-202ENST00000360642 HOXB5P09067 269 aa6.26□□□□□ -1.41
CLCN3-202ENST00000360642 MMP7P09237 267 aaPredicted RBP6.26□□□□□ -1.41
CLCN3-202ENST00000360642 PET100P0DJ07 73 aa6.26□□□□□ -1.41
CLCN3-202ENST00000360642 TCN2P20062 427 aa6.26□□□□□ -1.41
CLCN3-202ENST00000360642 HTR5AP47898 357 aa6.26□□□□□ -1.41
CLCN3-202ENST00000360642 CEACAM16Q2WEN9 425 aa6.26□□□□□ -1.41
CLCN3-202ENST00000360642 C10orf91Q5T1B1 145 aa6.26□□□□□ -1.41
CLCN3-202ENST00000360642 SKA3Q8IX90 412 aa6.26□□□□□ -1.41
CLCN3-202ENST00000360642 SULT4A1Q9BR01 284 aa6.26□□□□□ -1.41
CLCN3-202ENST00000360642 SPRY4Q9C004 299 aa6.26□□□□□ -1.41
CLCN3-202ENST00000360642 NCOR1O75376 2440 aa6.26□□□□□ -1.41
CLCN3-202ENST00000360642 TMEM218A2RU14 115 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 SERPINA7P05543 415 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 FCGR3AP08637 254 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 OR5H8P0DN80 308 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 HKR1P10072 659 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 ZNF708P17019 499 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 PCBD1P61457 104 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 ZNF92Q03936 586 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 AIMP2Q13155 320 aaKnown RBP6.25□□□□□ -1.41
CLCN3-202ENST00000360642 LPAL2Q16609 132 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 C1orf210Q8IVY1 113 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 OR10AD1Q8NGE0 317 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 CT55Q8WUE5 264 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 TMEM45BQ96B21 275 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 BORCS8Q96FH0 119 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 GUCD1Q96NT3 240 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 ASF1BQ9NVP2 202 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 TRAV34A0A0B4J273 112 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 GEMIN2O14893 280 aaKnown RBP6.25□□□□□ -1.41
CLCN3-202ENST00000360642 TRAPPC6AO75865 159 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 ATG12O94817 140 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 ACTL6AO96019 429 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 CYB561P49447 251 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 FUT6P51993 359 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 PDZK1IP1Q13113 114 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 DAZAP2Q15038 168 aaPredicted RBP6.25□□□□□ -1.41
CLCN3-202ENST00000360642 ZNF585AQ6P3V2 769 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 SGPP2Q8IWX5 399 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 ABHD3Q8WU67 409 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 TMED6Q8WW62 240 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 CPNE4Q96A23 557 aaPredicted RBP6.25□□□□□ -1.41
CLCN3-202ENST00000360642 ZNF845Q96IR2 970 aaPredicted RBP6.25□□□□□ -1.41
CLCN3-202ENST00000360642 C1QTNF5Q9BXJ0 243 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 ACKR4Q9NPB9 350 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 NECAP2Q9NVZ3 263 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 MEMO1Q9Y316 297 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 IGKV3D-15A0A087WSY6 115 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 ZNF587BE7ETH6 402 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 TAAR5O14804 337 aa6.25□□□□□ -1.41
CLCN3-202ENST00000360642 SFTPBP07988 381 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms