RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 LINC00470Q9BZP3 86 aa6.12□□□□□ -1.43
RAB5B-201ENST00000360299 SSSCA1O60232 199 aa6.12□□□□□ -1.43
RAB5B-201ENST00000360299 SNRNP70P08621 437 aaKnown RBP6.12□□□□□ -1.43
RAB5B-201ENST00000360299 SPNP16150 400 aa6.12□□□□□ -1.43
RAB5B-201ENST00000360299 NANOS3P60323 173 aaKnown RBP6.12□□□□□ -1.43
RAB5B-201ENST00000360299 ZPLD1Q8TCW7 415 aa6.12□□□□□ -1.43
RAB5B-201ENST00000360299 IMMP1LQ96LU5 166 aa6.12□□□□□ -1.43
RAB5B-201ENST00000360299 PPP1R3EQ9H7J1 279 aa6.12□□□□□ -1.43
RAB5B-201ENST00000360299 BIN3Q9NQY0 253 aa6.12□□□□□ -1.43
RAB5B-201ENST00000360299 SLC7A10Q9NS82 523 aa6.12□□□□□ -1.43
RAB5B-201ENST00000360299 STARD10Q9Y365 291 aa6.12□□□□□ -1.43
RAB5B-201ENST00000360299 KIAA1671Q9BY89 1806 aa6.12□□□□□ -1.43
RAB5B-201ENST00000360299 DIDO1Q9BTC0 2240 aaKnown RBP6.12□□□□□ -1.43
RAB5B-201ENST00000360299 CHD9Q3L8U1 2897 aa6.12□□□□□ -1.43
RAB5B-201ENST00000360299 OOEPA6NGQ2 149 aa6.12□□□□□ -1.43
RAB5B-201ENST00000360299 RPA2P15927 270 aa6.12□□□□□ -1.43
RAB5B-201ENST00000360299 RAB4BP61018 213 aa6.12□□□□□ -1.43
RAB5B-201ENST00000360299 PSG4Q00888 419 aa6.12□□□□□ -1.43
RAB5B-201ENST00000360299 PPP1R1AQ13522 171 aa6.12□□□□□ -1.43
RAB5B-201ENST00000360299 NRN1LQ496H8 165 aa6.12□□□□□ -1.43
RAB5B-201ENST00000360299 SLC25A53Q5H9E4 307 aa6.12□□□□□ -1.43
RAB5B-201ENST00000360299 ZNF787Q6DD87 383 aa6.12□□□□□ -1.43
RAB5B-201ENST00000360299 NEIL1Q96FI4 390 aaPredicted RBP6.12□□□□□ -1.43
RAB5B-201ENST00000360299 TMEM56Q96MV1 263 aa6.12□□□□□ -1.43
RAB5B-201ENST00000360299 RASL12Q9NYN1 266 aa6.12□□□□□ -1.43
RAB5B-201ENST00000360299 LPAR3Q9UBY5 353 aa6.12□□□□□ -1.43
RAB5B-201ENST00000360299 C3orf85A0A1B0GTC6 90 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 CLEC18AA5D8T8 446 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 H3BMH7 237 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 CST4P01036 141 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 MT-ND4LP03901 98 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 UQCRFS1P47985 274 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 PDLIM4P50479 330 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 PRRX1P54821 245 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 MUC20Q8N307 709 aaPredicted RBP6.11□□□□□ -1.43
RAB5B-201ENST00000360299 CLEC18CQ8NCF0 446 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 ST8SIA2Q92186 375 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 PHYHIPLQ96FC7 376 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 TIMP4Q99727 224 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 RNF7Q9UBF6 113 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 AMMECR1Q9Y4X0 333 aaPredicted RBP6.11□□□□□ -1.43
RAB5B-201ENST00000360299 FAM208BQ5VWN6 2430 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 TRBV5-7A0A0A0MS05 114 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 RPS10-NUDT3A0A1W2PQS6 291 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 ANKRD34BA5PLL1 514 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 M0R1X1 148 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 TDGF1P13385 188 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 COL8A1P27658 744 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 NKX6-1P78426 367 aaPredicted RBP6.11□□□□□ -1.43
RAB5B-201ENST00000360299 LINC01590Q5TEZ4 76 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 LINC00114Q6XXX2 140 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 TEX29Q8N6K0 151 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 OR52B4Q8NGK2 314 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 OR10AC1Q8NH08 325 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 RNASE6Q93091 150 aaKnown RBP6.11□□□□□ -1.43
RAB5B-201ENST00000360299 TMEM45BQ96B21 275 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 ADAT3Q96EY9 351 aaPredicted RBP6.11□□□□□ -1.43
RAB5B-201ENST00000360299 PGLYRP3Q96LB9 341 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 TCEAL7Q9BRU2 100 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 WDR13Q9H1Z4 485 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 PPP1R14DQ9NXH3 145 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 SIRT4Q9Y6E7 314 aaPredicted RBP6.11□□□□□ -1.43
RAB5B-201ENST00000360299 ESPL1Q14674 2120 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 MTCL1Q9Y4B5 1905 aaKnown RBP6.11□□□□□ -1.43
RAB5B-201ENST00000360299 LOC390937A0A1W2PQ73 354 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 IFNL4K9M1U5 179 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 ADRA2AP08913 450 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 CEACAM3P40198 252 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 OR2B8PP59922 312 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 CEACAM21Q3KPI0 293 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 AVPI1Q5T686 147 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 MDP1Q86V88 176 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 C15orf54Q8N8G6 183 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 SLC25A40Q8TBP6 338 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 POC1BQ8TC44 478 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 TMED6Q8WW62 240 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 ERGIC1Q969X5 290 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 RHOFQ9HBH0 211 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 SMCO4Q9NRQ5 59 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 C19orf12Q9NSK7 152 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 SERTAD4Q9NUC0 356 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 AK3Q9UIJ7 227 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 ACACBO00763 2458 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 DCTN6O00399 190 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 SOCS1O15524 211 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 SOX15O60248 233 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 PTHLHP12272 177 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 CBR1P16152 277 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 CD200P41217 278 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 KLF9Q13886 244 aaPredicted RBP6.11□□□□□ -1.43
RAB5B-201ENST00000360299 DMRTC1Q5HYR2 192 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 PRSS54Q6PEW0 395 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 HIST2H3AQ71DI3 136 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 HOGA1Q86XE5 327 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 THNSL2Q86YJ6 484 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 NFAM1Q8NET5 270 aaPredicted RBP6.11□□□□□ -1.43
RAB5B-201ENST00000360299 OR8B3Q8NGG8 313 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 VSTM2AQ8TAG5 236 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 CMTM2Q8TAZ6 248 aa6.11□□□□□ -1.43
RAB5B-201ENST00000360299 OR8B2Q96RD0 313 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms