RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 PPP1R35Q8TAP8 253 aa11.39□□□□□ -0.59
CCDC197-201ENST00000359253 ZFAND1Q8TCF1 268 aa11.39□□□□□ -0.59
CCDC197-201ENST00000359253 ZNF431Q8TF32 576 aaPredicted RBP11.39□□□□□ -0.59
CCDC197-201ENST00000359253 PLPPR2Q96GM1 343 aa11.39□□□□□ -0.59
CCDC197-201ENST00000359253 HS3ST6Q96QI5 342 aa11.39□□□□□ -0.59
CCDC197-201ENST00000359253 OR2V2Q96R30 315 aa11.39□□□□□ -0.59
CCDC197-201ENST00000359253 HDHD3Q9BSH5 251 aaPredicted RBP11.39□□□□□ -0.59
CCDC197-201ENST00000359253 EGLN1Q9GZT9 426 aa11.39□□□□□ -0.59
CCDC197-201ENST00000359253 SLC23A1Q9UHI7 598 aa11.39□□□□□ -0.59
CCDC197-201ENST00000359253 USP9YO00507 2555 aaPredicted RBP11.39□□□□□ -0.59
CCDC197-201ENST00000359253 hCG_1807616A0A1W2PRN6 198 aa11.38□□□□□ -0.59
CCDC197-201ENST00000359253 TUBAL3A6NHL2 446 aa11.38□□□□□ -0.59
CCDC197-201ENST00000359253 OR2AT4A6NND4 320 aa11.38□□□□□ -0.59
CCDC197-201ENST00000359253 C17orf100A8MU93 164 aa11.38□□□□□ -0.59
CCDC197-201ENST00000359253 TRDCB7Z8K6 153 aa11.38□□□□□ -0.59
CCDC197-201ENST00000359253 SLC33A1O00400 549 aaPredicted RBP11.38□□□□□ -0.59
CCDC197-201ENST00000359253 HS3ST1O14792 307 aa11.38□□□□□ -0.59
CCDC197-201ENST00000359253 LHBP01229 141 aa11.38□□□□□ -0.59
CCDC197-201ENST00000359253 IGHV1-46P01743 117 aa11.38□□□□□ -0.59
CCDC197-201ENST00000359253 HPXP02790 462 aa11.38□□□□□ -0.59
CCDC197-201ENST00000359253 ANXA3P12429 323 aa11.38□□□□□ -0.59
CCDC197-201ENST00000359253 SERPINF1P36955 418 aa11.38□□□□□ -0.59
CCDC197-201ENST00000359253 EIF2B2P49770 351 aaKnown RBP11.38□□□□□ -0.59
CCDC197-201ENST00000359253 PDCD1Q15116 288 aa11.38□□□□□ -0.59
CCDC197-201ENST00000359253 MPPED2Q15777 294 aa11.38□□□□□ -0.59
CCDC197-201ENST00000359253 TMEM128Q5BJH2 165 aa11.38□□□□□ -0.59
CCDC197-201ENST00000359253 PRAMEF6Q5VXH4 476 aa11.38□□□□□ -0.59
CCDC197-201ENST00000359253 LPCAT3Q6P1A2 487 aa11.38□□□□□ -0.59
CCDC197-201ENST00000359253 BRICD5Q6PL45 260 aa11.38□□□□□ -0.59
CCDC197-201ENST00000359253 LRRC29Q8WV35 223 aa11.38□□□□□ -0.59
CCDC197-201ENST00000359253 WDR13Q9H1Z4 485 aa11.38□□□□□ -0.59
CCDC197-201ENST00000359253 MS4A5Q9H3V2 200 aa11.38□□□□□ -0.59
CCDC197-201ENST00000359253 TMEM165Q9HC07 324 aa11.38□□□□□ -0.59
CCDC197-201ENST00000359253 IL36RNQ9UBH0 155 aa11.38□□□□□ -0.59
CCDC197-201ENST00000359253 ZNF69Q9UC07 566 aa11.38□□□□□ -0.59
CCDC197-201ENST00000359253 VSIG4Q9Y279 399 aa11.38□□□□□ -0.59
CCDC197-201ENST00000359253 RNF115Q9Y4L5 304 aa11.38□□□□□ -0.59
CCDC197-201ENST00000359253 MEIKINA0A087WXM9 373 aa11.37□□□□□ -0.59
CCDC197-201ENST00000359253 NKX2-6A6NCS4 301 aa11.37□□□□□ -0.59
CCDC197-201ENST00000359253 SHISA9B4DS77 424 aa11.37□□□□□ -0.59
CCDC197-201ENST00000359253 B9A039 149 aa11.37□□□□□ -0.59
CCDC197-201ENST00000359253 BOLA2-SMG1P6H3BVE0 249 aa11.37□□□□□ -0.59
CCDC197-201ENST00000359253 M0R233 179 aa11.37□□□□□ -0.59
CCDC197-201ENST00000359253 SPRY3O43610 288 aa11.37□□□□□ -0.59
CCDC197-201ENST00000359253 TK1P04183 234 aa11.37□□□□□ -0.59
CCDC197-201ENST00000359253 VSIG10L2P0DP72 767 aa11.37□□□□□ -0.59
CCDC197-201ENST00000359253 IRF2P14316 349 aa11.37□□□□□ -0.59
CCDC197-201ENST00000359253 IGFBP2P18065 325 aa11.37□□□□□ -0.59
CCDC197-201ENST00000359253 DUSP1P28562 367 aa11.37□□□□□ -0.59
CCDC197-201ENST00000359253 DHODHQ02127 395 aa11.37□□□□□ -0.59
CCDC197-201ENST00000359253 FCN2Q15485 313 aa11.37□□□□□ -0.59
CCDC197-201ENST00000359253 ZFP69Q49AA0 526 aa11.37□□□□□ -0.59
CCDC197-201ENST00000359253 AADACL3Q5VUY0 350 aa11.37□□□□□ -0.59
CCDC197-201ENST00000359253 ZNF660Q6AZW8 331 aaPredicted RBP11.37□□□□□ -0.59
CCDC197-201ENST00000359253 SLC35E4Q6ICL7 350 aa11.37□□□□□ -0.59
CCDC197-201ENST00000359253 ZNF497Q6ZNH5 498 aa11.37□□□□□ -0.59
CCDC197-201ENST00000359253 TMED4Q7Z7H5 227 aa11.37□□□□□ -0.59
CCDC197-201ENST00000359253 BATF2Q8N1L9 274 aa11.37□□□□□ -0.59
CCDC197-201ENST00000359253 OR4A4PQ8NGN8 299 aa11.37□□□□□ -0.59
CCDC197-201ENST00000359253 MRPL30Q8TCC3 161 aaKnown RBP11.37□□□□□ -0.59
CCDC197-201ENST00000359253 RDH5Q92781 318 aa11.37□□□□□ -0.59
CCDC197-201ENST00000359253 ZNF2Q9BSG1 426 aaPredicted RBP11.37□□□□□ -0.59
CCDC197-201ENST00000359253 UFSP2Q9NUQ7 469 aa11.37□□□□□ -0.59
CCDC197-201ENST00000359253 ZNF581Q9P0T4 197 aa11.37□□□□□ -0.59
CCDC197-201ENST00000359253 RNF7Q9UBF6 113 aa11.37□□□□□ -0.59
CCDC197-201ENST00000359253 PCDHB10Q9UN67 800 aa11.37□□□□□ -0.59
CCDC197-201ENST00000359253 C14orf166Q9Y224 244 aaKnown RBP11.37□□□□□ -0.59
CCDC197-201ENST00000359253 WIPI2Q9Y4P8 454 aa11.37□□□□□ -0.59
CCDC197-201ENST00000359253 DOPEY2Q9Y3R5 2298 aa11.37□□□□□ -0.59
CCDC197-201ENST00000359253 COL12A1Q99715 3063 aa11.37□□□□□ -0.59
CCDC197-201ENST00000359253 ICE1Q9Y2F5 2266 aa11.36□□□□□ -0.59
CCDC197-201ENST00000359253 IGKV1D-8A0A087WSZ0 117 aa11.36□□□□□ -0.59
CCDC197-201ENST00000359253 A0A0B4J2A0 478 aa11.36□□□□□ -0.59
CCDC197-201ENST00000359253 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.36□□□□□ -0.59
CCDC197-201ENST00000359253 LRRC30A6NM36 301 aa11.36□□□□□ -0.59
CCDC197-201ENST00000359253 SDCBPO00560 298 aaPredicted RBP11.36□□□□□ -0.59
CCDC197-201ENST00000359253 FABP7O15540 132 aa11.36□□□□□ -0.59
CCDC197-201ENST00000359253 C1QBP02746 253 aa11.36□□□□□ -0.59
CCDC197-201ENST00000359253 CTSDP07339 412 aaPredicted RBP11.36□□□□□ -0.59
CCDC197-201ENST00000359253 GSTT2P0CG29 244 aa11.36□□□□□ -0.59
CCDC197-201ENST00000359253 ZBTB25P24278 435 aa11.36□□□□□ -0.59
CCDC197-201ENST00000359253 CD83Q01151 205 aa11.36□□□□□ -0.59
CCDC197-201ENST00000359253 TRAT1Q6PIZ9 186 aa11.36□□□□□ -0.59
CCDC197-201ENST00000359253 ZNF826PQ6ZT77 177 aa11.36□□□□□ -0.59
CCDC197-201ENST00000359253 LYG2Q86SG7 212 aa11.36□□□□□ -0.59
CCDC197-201ENST00000359253 DMRTC2Q8IXT2 367 aaPredicted RBP11.36□□□□□ -0.59
CCDC197-201ENST00000359253 C12orf45Q8N5I9 185 aaPredicted RBP11.36□□□□□ -0.59
CCDC197-201ENST00000359253 DRAXINQ8NBI3 349 aaPredicted RBP11.36□□□□□ -0.59
CCDC197-201ENST00000359253 MARCH1Q8TCQ1 289 aa11.36□□□□□ -0.59
CCDC197-201ENST00000359253 FAM222BQ8WU58 562 aa11.36□□□□□ -0.59
CCDC197-201ENST00000359253 ITLN1Q8WWA0 313 aa11.36□□□□□ -0.59
CCDC197-201ENST00000359253 MAFIPQ8WZ33 124 aa11.36□□□□□ -0.59
CCDC197-201ENST00000359253 MRGPRFQ96AM1 343 aa11.36□□□□□ -0.59
CCDC197-201ENST00000359253 ZNF486Q96H40 463 aaPredicted RBP11.36□□□□□ -0.59
CCDC197-201ENST00000359253 PHB2Q99623 299 aa11.36□□□□□ -0.59
CCDC197-201ENST00000359253 SEC22CQ9BRL7 303 aa11.36□□□□□ -0.59
CCDC197-201ENST00000359253 BEX2Q9BXY8 128 aa11.36□□□□□ -0.59
CCDC197-201ENST00000359253 CLEC4MQ9H2X3 399 aaPredicted RBP11.36□□□□□ -0.59
CCDC197-201ENST00000359253 NCOR1P1Q9H4R4 102 aa11.36□□□□□ -0.59
CCDC197-201ENST00000359253 RANBP3Q9H6Z4 567 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms