RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 PNLIPP16233 465 aa16.19■□□□□ 0.18
SHANK1-202ENST00000359082 CRISP2P16562 243 aa16.19■□□□□ 0.18
SHANK1-202ENST00000359082 ELOBQ15370 118 aa16.19■□□□□ 0.18
SHANK1-202ENST00000359082 MRPL54Q6P161 138 aaKnown RBP16.19■□□□□ 0.18
SHANK1-202ENST00000359082 DTD1Q8TEA8 209 aa16.19■□□□□ 0.18
SHANK1-202ENST00000359082 PTP4A1Q93096 173 aa16.19■□□□□ 0.18
SHANK1-202ENST00000359082 ZNF426Q9BUY5 554 aa16.18■□□□□ 0.18
SHANK1-202ENST00000359082 SAP30LQ9HAJ7 183 aa16.18■□□□□ 0.18
SHANK1-202ENST00000359082 FRRS1LQ9P0K9 344 aa16.18■□□□□ 0.18
SHANK1-202ENST00000359082 HELTA6NFD8 242 aa16.18■□□□□ 0.18
SHANK1-202ENST00000359082 ANKRD55Q3KP44 614 aa16.18■□□□□ 0.18
SHANK1-202ENST00000359082 ZNF841Q6ZN19 808 aa16.18■□□□□ 0.18
SHANK1-202ENST00000359082 OR8A1Q8NGG7 326 aa16.18■□□□□ 0.18
SHANK1-202ENST00000359082 FAM60AQ9NP50 221 aa16.18■□□□□ 0.18
SHANK1-202ENST00000359082 VSIG4Q9Y279 399 aa16.18■□□□□ 0.18
SHANK1-202ENST00000359082 SYNGR2O43760 224 aa16.18■□□□□ 0.18
SHANK1-202ENST00000359082 CEBPDP49716 269 aaPredicted RBP16.18■□□□□ 0.18
SHANK1-202ENST00000359082 INPP5JQ15735 1006 aaPredicted RBP16.18■□□□□ 0.18
SHANK1-202ENST00000359082 ECSCRQ19T08 205 aa16.18■□□□□ 0.18
SHANK1-202ENST00000359082 HIKESHIQ53FT3 197 aa16.18■□□□□ 0.18
SHANK1-202ENST00000359082 AWAT1Q58HT5 328 aa16.18■□□□□ 0.18
SHANK1-202ENST00000359082 IGSF23A1L1A6 192 aa16.18■□□□□ 0.18
SHANK1-202ENST00000359082 OR10G8Q8NGN5 311 aa16.18■□□□□ 0.18
SHANK1-202ENST00000359082 OR4X1Q8NH49 305 aa16.18■□□□□ 0.18
SHANK1-202ENST00000359082 WNT5AP41221 380 aa16.18■□□□□ 0.18
SHANK1-202ENST00000359082 DLK1P80370 383 aa16.18■□□□□ 0.18
SHANK1-202ENST00000359082 BSXQ3C1V8 233 aa16.18■□□□□ 0.18
SHANK1-202ENST00000359082 VSTM2AQ8TAG5 236 aa16.18■□□□□ 0.18
SHANK1-202ENST00000359082 LPAR2Q9HBW0 351 aa16.18■□□□□ 0.18
SHANK1-202ENST00000359082 CCL28Q9NRJ3 127 aa16.18■□□□□ 0.18
SHANK1-202ENST00000359082 CXorf51AA0A1B0GTR3 108 aa16.17■□□□□ 0.18
SHANK1-202ENST00000359082 OR4C46A6NHA9 309 aa16.17■□□□□ 0.18
SHANK1-202ENST00000359082 MELTFP08582 738 aa16.17■□□□□ 0.18
SHANK1-202ENST00000359082 RIGQ13278 110 aa16.17■□□□□ 0.18
SHANK1-202ENST00000359082 FAM219AQ8IW50 185 aa16.17■□□□□ 0.18
SHANK1-202ENST00000359082 RABAC1Q9UI14 185 aa16.17■□□□□ 0.18
SHANK1-202ENST00000359082 TINAGQ9UJW2 476 aa16.17■□□□□ 0.18
SHANK1-202ENST00000359082 SCAND1P57086 179 aa16.17■□□□□ 0.18
SHANK1-202ENST00000359082 B2MP61769 119 aa16.17■□□□□ 0.18
SHANK1-202ENST00000359082 IGSF11Q5DX21 431 aa16.17■□□□□ 0.18
SHANK1-202ENST00000359082 ADAD2Q8NCV1 583 aaKnown RBP16.17■□□□□ 0.18
SHANK1-202ENST00000359082 RND1Q92730 232 aa16.17■□□□□ 0.18
SHANK1-202ENST00000359082 IL17BQ9UHF5 180 aa16.17■□□□□ 0.18
SHANK1-202ENST00000359082 RPL24P83731 157 aaKnown RBP16.17■□□□□ 0.18
SHANK1-202ENST00000359082 PIGYQ3MUY2 71 aa16.17■□□□□ 0.18
SHANK1-202ENST00000359082 OR2T10Q8NGZ9 312 aa16.17■□□□□ 0.18
SHANK1-202ENST00000359082 RGP1Q92546 391 aaPredicted RBP16.17■□□□□ 0.18
SHANK1-202ENST00000359082 COL8A1P27658 744 aa16.17■□□□□ 0.18
SHANK1-202ENST00000359082 OR1K1Q8NGR3 316 aa16.17■□□□□ 0.18
SHANK1-202ENST00000359082 ISOC2Q96AB3 205 aa16.17■□□□□ 0.18
SHANK1-202ENST00000359082 PHYHIPLQ96FC7 376 aa16.17■□□□□ 0.18
SHANK1-202ENST00000359082 TMUB1Q9BVT8 246 aa16.17■□□□□ 0.18
SHANK1-202ENST00000359082 ANXA10Q9UJ72 324 aa16.17■□□□□ 0.18
SHANK1-202ENST00000359082 RPS4Y2Q8TD47 263 aa16.17■□□□□ 0.18
SHANK1-202ENST00000359082 SLC52A3Q9NQ40 469 aa16.16■□□□□ 0.18
SHANK1-202ENST00000359082 ZNF253O75346 499 aa16.16■□□□□ 0.18
SHANK1-202ENST00000359082 DAOP14920 347 aa16.16■□□□□ 0.18
SHANK1-202ENST00000359082 HIST3H3Q16695 136 aa16.16■□□□□ 0.18
SHANK1-202ENST00000359082 ZNF665Q9H7R5 613 aa16.16■□□□□ 0.18
SHANK1-202ENST00000359082 GLRX2Q9NS18 164 aa16.16■□□□□ 0.18
SHANK1-202ENST00000359082 CD226Q15762 336 aa16.16■□□□□ 0.18
SHANK1-202ENST00000359082 KHDC3LQ587J8 217 aa16.16■□□□□ 0.18
SHANK1-202ENST00000359082 VN1R4Q7Z5H5 301 aa16.16■□□□□ 0.18
SHANK1-202ENST00000359082 TMEM191AQ9H0A3 160 aa16.16■□□□□ 0.18
SHANK1-202ENST00000359082 CRISPLD2Q9H0B8 497 aa16.16■□□□□ 0.18
SHANK1-202ENST00000359082 RNF7Q9UBF6 113 aa16.16■□□□□ 0.18
SHANK1-202ENST00000359082 PRSS50Q9UI38 385 aa16.16■□□□□ 0.18
SHANK1-202ENST00000359082 EVPLQ92817 2033 aa16.16■□□□□ 0.18
SHANK1-202ENST00000359082 TMSB15BA0A087X1C1 80 aa16.16■□□□□ 0.18
SHANK1-202ENST00000359082 TNFSF14O43557 240 aa16.16■□□□□ 0.18
SHANK1-202ENST00000359082 EML2O95834 649 aa16.16■□□□□ 0.18
SHANK1-202ENST00000359082 FAM157CP0CG43 387 aa16.16■□□□□ 0.18
SHANK1-202ENST00000359082 Q8WTZ3 238 aa16.16■□□□□ 0.18
SHANK1-202ENST00000359082 LIPT2A6NK58 231 aa16.16■□□□□ 0.18
SHANK1-202ENST00000359082 ZIC1Q15915 447 aa16.16■□□□□ 0.18
SHANK1-202ENST00000359082 C1QL3Q5VWW1 255 aa16.16■□□□□ 0.18
SHANK1-202ENST00000359082 TCFL5Q9UL49 500 aa16.16■□□□□ 0.18
SHANK1-202ENST00000359082 PDE4DIPQ5VU43 2346 aa16.16■□□□□ 0.18
SHANK1-202ENST00000359082 HOXC4P09017 264 aaPredicted RBP16.15■□□□□ 0.18
SHANK1-202ENST00000359082 ZNF137PP52743 207 aa16.15■□□□□ 0.18
SHANK1-202ENST00000359082 COL19A1Q14993 1142 aa16.15■□□□□ 0.18
SHANK1-202ENST00000359082 ZNF880Q6PDB4 577 aa16.15■□□□□ 0.18
SHANK1-202ENST00000359082 ASCL5Q7RTU5 278 aa16.15■□□□□ 0.18
SHANK1-202ENST00000359082 ABHD1Q96SE0 405 aa16.15■□□□□ 0.18
SHANK1-202ENST00000359082 LOC389332A0A1B0GUA5 103 aa16.15■□□□□ 0.18
SHANK1-202ENST00000359082 PCMT1P22061 227 aa16.15■□□□□ 0.18
SHANK1-202ENST00000359082 RAC3P60763 192 aa16.15■□□□□ 0.18
SHANK1-202ENST00000359082 OR2H1Q9GZK4 316 aa16.15■□□□□ 0.18
SHANK1-202ENST00000359082 TRAV39A0A0B4J263 110 aa16.15■□□□□ 0.18
SHANK1-202ENST00000359082 SRSF9Q13242 221 aaKnown RBP eCLIP16.15■□□□□ 0.18
SHANK1-202ENST00000359082 CD300LDQ6UXZ3 194 aa16.15■□□□□ 0.18
SHANK1-202ENST00000359082 RASL10BQ96S79 203 aa16.15■□□□□ 0.18
SHANK1-202ENST00000359082 LRP5O75197 1615 aa16.15■□□□□ 0.18
SHANK1-202ENST00000359082 CTGFP29279 349 aa16.15■□□□□ 0.18
SHANK1-202ENST00000359082 RNFT1Q5M7Z0 435 aa16.15■□□□□ 0.18
SHANK1-202ENST00000359082 WDR34Q96EX3 536 aa16.15■□□□□ 0.18
SHANK1-202ENST00000359082 APCSP02743 223 aa16.15■□□□□ 0.18
SHANK1-202ENST00000359082 OR2D3Q8NGH3 330 aa16.15■□□□□ 0.18
SHANK1-202ENST00000359082 ABHD3Q8WU67 409 aa16.15■□□□□ 0.18
SHANK1-202ENST00000359082 PERPQ96FX8 193 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms