RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 LDLRAD1Q5T700 205 aa9.35□□□□□ -0.91
FXR1-202ENST00000357559 OR2A5Q96R48 311 aa9.35□□□□□ -0.91
FXR1-202ENST00000357559 FOXJ3Q9UPW0 622 aa9.35□□□□□ -0.91
FXR1-202ENST00000357559 TIAM2Q8IVF5 1701 aa9.35□□□□□ -0.91
FXR1-202ENST00000357559 EML2O95834 649 aa9.35□□□□□ -0.91
FXR1-202ENST00000357559 RECKO95980 971 aa9.35□□□□□ -0.91
FXR1-202ENST00000357559 GPX2P18283 190 aa9.35□□□□□ -0.91
FXR1-202ENST00000357559 ID1P41134 155 aa9.35□□□□□ -0.91
FXR1-202ENST00000357559 KIR3DL2P43630 455 aa9.35□□□□□ -0.91
FXR1-202ENST00000357559 FAM53AQ6NSI3 398 aaPredicted RBP9.35□□□□□ -0.91
FXR1-202ENST00000357559 ANXA10Q9UJ72 324 aa9.35□□□□□ -0.91
FXR1-202ENST00000357559 TMEM218A2RU14 115 aa9.34□□□□□ -0.91
FXR1-202ENST00000357559 SMAD7O15105 426 aaKnown RBP9.34□□□□□ -0.91
FXR1-202ENST00000357559 KCNMB1Q16558 191 aa9.34□□□□□ -0.91
FXR1-202ENST00000357559 LDLRAD3Q86YD5 345 aa9.34□□□□□ -0.91
FXR1-202ENST00000357559 TBL2Q9Y4P3 447 aaKnown RBP9.34□□□□□ -0.91
FXR1-202ENST00000357559 IGSF23A1L1A6 192 aa9.34□□□□□ -0.91
FXR1-202ENST00000357559 IFITM10A6NMD0 228 aa9.34□□□□□ -0.91
FXR1-202ENST00000357559 ZNF815PA8K554 130 aa9.34□□□□□ -0.91
FXR1-202ENST00000357559 SNRPGP15A8MWD9 76 aa9.34□□□□□ -0.91
FXR1-202ENST00000357559 SYNGR2O43760 224 aa9.34□□□□□ -0.91
FXR1-202ENST00000357559 PRRX2Q99811 253 aa9.34□□□□□ -0.91
FXR1-202ENST00000357559 DUSP21Q9H596 190 aa9.34□□□□□ -0.91
FXR1-202ENST00000357559 ZNF552Q9H707 407 aaPredicted RBP9.34□□□□□ -0.91
FXR1-202ENST00000357559 LAMB1P07942 1786 aa9.34□□□□□ -0.91
FXR1-202ENST00000357559 FER1L5A0AVI2 2057 aa9.34□□□□□ -0.91
FXR1-202ENST00000357559 ISL1P61371 349 aa9.34□□□□□ -0.91
FXR1-202ENST00000357559 Q8WTZ3 238 aa9.34□□□□□ -0.91
FXR1-202ENST00000357559 CITED2Q99967 270 aaPredicted RBP9.34□□□□□ -0.91
FXR1-202ENST00000357559 CACFD1Q9UGQ2 172 aa9.34□□□□□ -0.91
FXR1-202ENST00000357559 DHRS3O75911 302 aa9.34□□□□□ -0.91
FXR1-202ENST00000357559 STARD4Q96DR4 205 aa9.34□□□□□ -0.91
FXR1-202ENST00000357559 MAP6Q96JE9 813 aa9.34□□□□□ -0.91
FXR1-202ENST00000357559 A6NDN8 102 aa9.34□□□□□ -0.91
FXR1-202ENST00000357559 DEDDO75618 318 aa9.34□□□□□ -0.91
FXR1-202ENST00000357559 SMIM18P0DKX4 95 aa9.34□□□□□ -0.91
FXR1-202ENST00000357559 HIST1H1EP10412 219 aaKnown RBP9.34□□□□□ -0.91
FXR1-202ENST00000357559 PGFP49763 221 aa9.34□□□□□ -0.91
FXR1-202ENST00000357559 NUBP1P53384 320 aa9.34□□□□□ -0.91
FXR1-202ENST00000357559 CD226Q15762 336 aa9.34□□□□□ -0.91
FXR1-202ENST00000357559 LIAT1Q6ZQX7 453 aa9.34□□□□□ -0.91
FXR1-202ENST00000357559 ZNF738Q8NE65 137 aa9.34□□□□□ -0.91
FXR1-202ENST00000357559 OTOSQ8NHW6 89 aa9.34□□□□□ -0.91
FXR1-202ENST00000357559 TRAV38-1A0A0B4J264 116 aa9.33□□□□□ -0.92
FXR1-202ENST00000357559 TRAV17A0A0B4J275 112 aa9.33□□□□□ -0.92
FXR1-202ENST00000357559 RTN4RL1Q86UN2 441 aaPredicted RBP9.33□□□□□ -0.92
FXR1-202ENST00000357559 RP1L1Q8IWN7 2480 aaPredicted RBP9.33□□□□□ -0.92
FXR1-202ENST00000357559 SS18L1O75177 396 aaPredicted RBP9.33□□□□□ -0.92
FXR1-202ENST00000357559 ZP3P21754 424 aa9.33□□□□□ -0.92
FXR1-202ENST00000357559 IZUMO4Q1ZYL8 232 aa9.33□□□□□ -0.92
FXR1-202ENST00000357559 RSPO2Q6UXX9 243 aaPredicted RBP9.33□□□□□ -0.92
FXR1-202ENST00000357559 CALHM1Q8IU99 346 aa9.33□□□□□ -0.92
FXR1-202ENST00000357559 CARFQ8N187 725 aa9.33□□□□□ -0.92
FXR1-202ENST00000357559 MUC20Q8N307 709 aaPredicted RBP9.33□□□□□ -0.92
FXR1-202ENST00000357559 TMEM191AQ9H0A3 160 aa9.33□□□□□ -0.92
FXR1-202ENST00000357559 SOX21Q9Y651 276 aaPredicted RBP9.33□□□□□ -0.92
FXR1-202ENST00000357559 POLR2AP24928 1970 aaKnown RBP9.33□□□□□ -0.92
FXR1-202ENST00000357559 PRSS41Q7RTY9 318 aa9.33□□□□□ -0.92
FXR1-202ENST00000357559 LRRC37A3O60309 1634 aa9.33□□□□□ -0.92
FXR1-202ENST00000357559 TPRP12270 2363 aaKnown RBP9.33□□□□□ -0.92
FXR1-202ENST00000357559 A0A1W2PPC4 97 aa9.33□□□□□ -0.92
FXR1-202ENST00000357559 EPPINO95925 133 aa9.33□□□□□ -0.92
FXR1-202ENST00000357559 GZMKP49863 264 aa9.33□□□□□ -0.92
FXR1-202ENST00000357559 RELBQ01201 579 aa9.33□□□□□ -0.92
FXR1-202ENST00000357559 TRIP6Q15654 476 aaKnown RBP9.33□□□□□ -0.92
FXR1-202ENST00000357559 ZNF343Q6P1L6 599 aa9.33□□□□□ -0.92
FXR1-202ENST00000357559 SLC23A3Q6PIS1 610 aa9.33□□□□□ -0.92
FXR1-202ENST00000357559 LRP6O75581 1613 aa9.33□□□□□ -0.92
FXR1-202ENST00000357559 FFAR1O14842 300 aa9.33□□□□□ -0.92
FXR1-202ENST00000357559 SLC6A1P30531 599 aa9.33□□□□□ -0.92
FXR1-202ENST00000357559 GPR3P46089 330 aa9.33□□□□□ -0.92
FXR1-202ENST00000357559 HEATR1Q9H583 2144 aaKnown RBP9.33□□□□□ -0.92
FXR1-202ENST00000357559 TRAV8-7A0A075B6U6 113 aa9.33□□□□□ -0.92
FXR1-202ENST00000357559 IGHV5-51A0A0C4DH38 117 aa9.33□□□□□ -0.92
FXR1-202ENST00000357559 M0R143 59 aa9.33□□□□□ -0.92
FXR1-202ENST00000357559 HAND1O96004 215 aa9.33□□□□□ -0.92
FXR1-202ENST00000357559 HIST1H1DP16402 221 aaKnown RBP9.33□□□□□ -0.92
FXR1-202ENST00000357559 MDH2P40926 338 aaKnown RBP9.33□□□□□ -0.92
FXR1-202ENST00000357559 PSG6Q00889 435 aa9.33□□□□□ -0.92
FXR1-202ENST00000357559 SCMH1Q96GD3 660 aa9.33□□□□□ -0.92
FXR1-202ENST00000357559 GPR27Q9NS67 375 aa9.33□□□□□ -0.92
FXR1-202ENST00000357559 RBFOX3A6NFN3 312 aa9.33□□□□□ -0.92
FXR1-202ENST00000357559 IGFBP6P24592 240 aaPredicted RBP9.33□□□□□ -0.92
FXR1-202ENST00000357559 MAGEA5P43359 124 aa9.33□□□□□ -0.92
FXR1-202ENST00000357559 DLK1P80370 383 aa9.33□□□□□ -0.92
FXR1-202ENST00000357559 IGSF11Q5DX21 431 aa9.33□□□□□ -0.92
FXR1-202ENST00000357559 GLDNQ6ZMI3 551 aaPredicted RBP9.33□□□□□ -0.92
FXR1-202ENST00000357559 OR4S2Q8NH73 311 aa9.33□□□□□ -0.92
FXR1-202ENST00000357559 IGHV3-72A0A0B4J1Y9 119 aa9.32□□□□□ -0.92
FXR1-202ENST00000357559 SNURFLB1AK76 121 aa9.32□□□□□ -0.92
FXR1-202ENST00000357559 METAP1P53582 386 aa9.32□□□□□ -0.92
FXR1-202ENST00000357559 MRPS11P82912 194 aaKnown RBP9.32□□□□□ -0.92
FXR1-202ENST00000357559 OR10G8Q8NGN5 311 aa9.32□□□□□ -0.92
FXR1-202ENST00000357559 HARBI1Q96MB7 349 aa9.32□□□□□ -0.92
FXR1-202ENST00000357559 RAB40CQ96S21 281 aa9.32□□□□□ -0.92
FXR1-202ENST00000357559 IGHV3OR16-10A0A075B7F0 116 aa9.32□□□□□ -0.92
FXR1-202ENST00000357559 PSMB11A5LHX3 300 aa9.32□□□□□ -0.92
FXR1-202ENST00000357559 SMPD2O60906 423 aa9.32□□□□□ -0.92
FXR1-202ENST00000357559 PRSS2P07478 247 aa9.32□□□□□ -0.92
FXR1-202ENST00000357559 SELENOPP49908 381 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms