RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 CLN8Q9UBY8 286 aa21.04■□□□□ 0.96
SSBP3-202ENST00000357475 AK3Q9UIJ7 227 aa21.04■□□□□ 0.96
SSBP3-202ENST00000357475 MCRIP1C9JLW8 97 aa21.03■□□□□ 0.96
SSBP3-202ENST00000357475 XRCC3O43542 346 aa21.03■□□□□ 0.96
SSBP3-202ENST00000357475 TAS2R20P59543 309 aa21.03■□□□□ 0.96
SSBP3-202ENST00000357475 ZNF260Q3ZCT1 412 aa21.03■□□□□ 0.96
SSBP3-202ENST00000357475 CDNFQ49AH0 187 aa21.03■□□□□ 0.96
SSBP3-202ENST00000357475 LRRC10Q5BKY1 277 aa21.03■□□□□ 0.96
SSBP3-202ENST00000357475 TMEM69Q5SWH9 247 aa21.03■□□□□ 0.96
SSBP3-202ENST00000357475 SSBP3Q9BWW4 388 aaPredicted RBP21.03■□□□□ 0.96
SSBP3-202ENST00000357475 FAM234AQ9H0X4 552 aa21.03■□□□□ 0.96
SSBP3-202ENST00000357475 DIABLOQ9NR28 239 aa21.03■□□□□ 0.96
SSBP3-202ENST00000357475 HSF4Q9ULV5 492 aa21.03■□□□□ 0.96
SSBP3-202ENST00000357475 ZANQ9Y493 2812 aa21.03■□□□□ 0.96
SSBP3-202ENST00000357475 TMEM235A6NFC5 223 aa21.02■□□□□ 0.96
SSBP3-202ENST00000357475 MGST3O14880 152 aa21.02■□□□□ 0.96
SSBP3-202ENST00000357475 GLIPR1P48060 266 aa21.02■□□□□ 0.96
SSBP3-202ENST00000357475 GNB2P62879 340 aa21.02■□□□□ 0.96
SSBP3-202ENST00000357475 FAM189A2Q15884 450 aa21.02■□□□□ 0.96
SSBP3-202ENST00000357475 RSBN1Q5VWQ0 802 aaPredicted RBP21.02■□□□□ 0.96
SSBP3-202ENST00000357475 Q6ZPA2 131 aa21.02■□□□□ 0.96
SSBP3-202ENST00000357475 PHF21AQ96BD5 680 aa21.02■□□□□ 0.96
SSBP3-202ENST00000357475 DIRAS2Q96HU8 199 aa21.02■□□□□ 0.96
SSBP3-202ENST00000357475 WDFY2Q96P53 400 aa21.02■□□□□ 0.96
SSBP3-202ENST00000357475 DCTN5Q9BTE1 182 aa21.02■□□□□ 0.96
SSBP3-202ENST00000357475 LPAR2Q9HBW0 351 aa21.02■□□□□ 0.96
SSBP3-202ENST00000357475 KIAA2026Q5HYC2 2103 aa21.01■□□□□ 0.95
SSBP3-202ENST00000357475 TRAV39A0A0B4J263 110 aa21.01■□□□□ 0.95
SSBP3-202ENST00000357475 EDDM3BP56851 147 aa21.01■□□□□ 0.95
SSBP3-202ENST00000357475 LCN2P80188 198 aa21.01■□□□□ 0.95
SSBP3-202ENST00000357475 LOXL1Q08397 574 aaPredicted RBP21.01■□□□□ 0.95
SSBP3-202ENST00000357475 H1FXQ92522 213 aaKnown RBP21.01■□□□□ 0.95
SSBP3-202ENST00000357475 RAB39BQ96DA2 213 aa21.01■□□□□ 0.95
SSBP3-202ENST00000357475 ETAA1Q9NY74 926 aa21.01■□□□□ 0.95
SSBP3-202ENST00000357475 MRPS7Q9Y2R9 242 aaKnown RBP21.01■□□□□ 0.95
SSBP3-202ENST00000357475 FLNAP21333 2647 aaKnown RBP21.01■□□□□ 0.95
SSBP3-202ENST00000357475 A0A0A6YYH2 397 aa21■□□□□ 0.95
SSBP3-202ENST00000357475 A6NJ64 397 aa21■□□□□ 0.95
SSBP3-202ENST00000357475 C22orf46C9J442 243 aa21■□□□□ 0.95
SSBP3-202ENST00000357475 HLA-DQB1P01920 261 aa21■□□□□ 0.95
SSBP3-202ENST00000357475 CSN2P05814 226 aa21■□□□□ 0.95
SSBP3-202ENST00000357475 ESCO2Q56NI9 601 aa21■□□□□ 0.95
SSBP3-202ENST00000357475 BTN2A1Q7KYR7 527 aa21■□□□□ 0.95
SSBP3-202ENST00000357475 GDPD3Q7L5L3 318 aa21■□□□□ 0.95
SSBP3-202ENST00000357475 NUDT16L1Q9BRJ7 211 aaKnown RBP21■□□□□ 0.95
SSBP3-202ENST00000357475 AUNIPQ9H7T9 357 aa21■□□□□ 0.95
SSBP3-202ENST00000357475 C19orf12Q9NSK7 152 aa21■□□□□ 0.95
SSBP3-202ENST00000357475 ADAM30Q9UKF2 790 aa21■□□□□ 0.95
SSBP3-202ENST00000357475 H7C1Q1 480 aa20.99■□□□□ 0.95
SSBP3-202ENST00000357475 SCGNO76038 276 aa20.99■□□□□ 0.95
SSBP3-202ENST00000357475 KRBOX4Q5JUW0 171 aa20.99■□□□□ 0.95
SSBP3-202ENST00000357475 ZNF497Q6ZNH5 498 aa20.99■□□□□ 0.95
SSBP3-202ENST00000357475 TCF23Q7RTU1 214 aa20.99■□□□□ 0.95
SSBP3-202ENST00000357475 OR5D13Q8NGL4 314 aa20.99■□□□□ 0.95
SSBP3-202ENST00000357475 PPP1R35Q8TAP8 253 aa20.99■□□□□ 0.95
SSBP3-202ENST00000357475 KIF25Q9UIL4 384 aa20.99■□□□□ 0.95
SSBP3-202ENST00000357475 A0A0G2JMP0 313 aa20.99■□□□□ 0.95
SSBP3-202ENST00000357475 A0A0X1KG70 313 aa20.99■□□□□ 0.95
SSBP3-202ENST00000357475 S100A5P33763 92 aa20.99■□□□□ 0.95
SSBP3-202ENST00000357475 GUCA2AQ02747 115 aa20.99■□□□□ 0.95
SSBP3-202ENST00000357475 RBM39Q14498 530 aaKnown RBP20.99■□□□□ 0.95
SSBP3-202ENST00000357475 SNX29P2Q8IUI4 249 aa20.99■□□□□ 0.95
SSBP3-202ENST00000357475 OR4M2Q8NGB6 313 aa20.99■□□□□ 0.95
SSBP3-202ENST00000357475 NUDCD2Q8WVJ2 157 aa20.99■□□□□ 0.95
SSBP3-202ENST00000357475 SMAD7O15105 426 aaKnown RBP20.98■□□□□ 0.95
SSBP3-202ENST00000357475 GLAP06280 429 aa20.98■□□□□ 0.95
SSBP3-202ENST00000357475 P2RX3P56373 397 aa20.98■□□□□ 0.95
SSBP3-202ENST00000357475 C5orf24Q7Z6I8 188 aa20.98■□□□□ 0.95
SSBP3-202ENST00000357475 CCDC190Q86UF4 302 aa20.98■□□□□ 0.95
SSBP3-202ENST00000357475 OR4K15Q8NH41 348 aa20.98■□□□□ 0.95
SSBP3-202ENST00000357475 MRPL30Q8TCC3 161 aaKnown RBP20.98■□□□□ 0.95
SSBP3-202ENST00000357475 CCDC107Q8WV48 283 aa20.98■□□□□ 0.95
SSBP3-202ENST00000357475 ABHD1Q96SE0 405 aa20.98■□□□□ 0.95
SSBP3-202ENST00000357475 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP20.98■□□□□ 0.954e-7■■■■■ 27
SSBP3-202ENST00000357475 A8MXK9 166 aa20.97■□□□□ 0.95
SSBP3-202ENST00000357475 SSX5O60225 188 aa20.97■□□□□ 0.95
SSBP3-202ENST00000357475 MT-ND4P03905 459 aa20.97■□□□□ 0.95
SSBP3-202ENST00000357475 NPY4RP50391 375 aa20.97■□□□□ 0.95
SSBP3-202ENST00000357475 HACD4Q5VWC8 232 aa20.97■□□□□ 0.95
SSBP3-202ENST00000357475 SOSTQ9BQB4 213 aa20.97■□□□□ 0.95
SSBP3-202ENST00000357475 V9GYH0 126 aa20.97■□□□□ 0.95
SSBP3-202ENST00000357475 MEIOCA2RUB1 952 aa20.96■□□□□ 0.95
SSBP3-202ENST00000357475 H3BUI4 141 aa20.96■□□□□ 0.95
SSBP3-202ENST00000357475 GSTP1P09211 210 aaKnown RBP20.96■□□□□ 0.95
SSBP3-202ENST00000357475 TALDO1P37837 337 aa20.96■□□□□ 0.95
SSBP3-202ENST00000357475 KCNJ3P48549 501 aa20.96■□□□□ 0.95
SSBP3-202ENST00000357475 SLC35E4Q6ICL7 350 aa20.96■□□□□ 0.95
SSBP3-202ENST00000357475 GAPTQ8N292 157 aa20.96■□□□□ 0.95
SSBP3-202ENST00000357475 CMSS1Q9BQ75 279 aaKnown RBP20.96■□□□□ 0.95
SSBP3-202ENST00000357475 MMP26Q9NRE1 261 aa20.96■□□□□ 0.95
SSBP3-202ENST00000357475 CREBBPQ92793 2442 aa20.95■□□□□ 0.95
SSBP3-202ENST00000357475 MEIKINA0A087WXM9 373 aa20.95■□□□□ 0.94
SSBP3-202ENST00000357475 TMEM30CPA0ZSE6 113 aa20.95■□□□□ 0.94
SSBP3-202ENST00000357475 ODAMA1E959 279 aa20.95■□□□□ 0.94
SSBP3-202ENST00000357475 MEIS3P1A6NDR6 274 aa20.95■□□□□ 0.94
SSBP3-202ENST00000357475 NAPSAO96009 420 aa20.95■□□□□ 0.94
SSBP3-202ENST00000357475 RPL31P62899 125 aaKnown RBP20.95■□□□□ 0.94
SSBP3-202ENST00000357475 PAX5Q02548 391 aa20.95■□□□□ 0.94
SSBP3-202ENST00000357475 PAX2Q02962 417 aa20.95■□□□□ 0.94
SSBP3-202ENST00000357475 ARFRP1Q13795 201 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms