RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 AMTP48728 403 aa13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 RHOBP62745 196 aa13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 NOL4LQ96MY1 436 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 GINS3Q9BRX5 216 aa13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 OR2D2Q9H210 308 aa13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 QSER1Q2KHR3 1735 aa13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 IGHV1OR15-9A0A0B4J2B8 117 aa13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 C4orf51C9J302 202 aa13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 TOX3O15405 576 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 HRASP01112 189 aa13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 NGFRP08138 427 aa13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 POU2F2P09086 479 aa13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 FBP1P09467 338 aa13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 CRISP2P16562 243 aa13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 NXPH1P58417 271 aa13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 HLA-BQ31612 363 aa13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 CPEB3Q8NE35 698 aaKnown RBP13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 LRFN3Q9BTN0 628 aa13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 MANBALQ9NQG1 85 aa13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 P4HTMQ9NXG6 502 aa13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 SLC45A2Q9UMX9 530 aa13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 CEP250Q9BV73 2442 aa13.7□□□□□ -0.22
TRAPPC11-202ENST00000357207 MYOFQ9NZM1 2061 aa13.69□□□□□ -0.22
TRAPPC11-202ENST00000357207 LGALS4P56470 323 aa13.69□□□□□ -0.22
TRAPPC11-202ENST00000357207 PAX5Q02548 391 aa13.69□□□□□ -0.22
TRAPPC11-202ENST00000357207 MYPOPQ86VE0 399 aaPredicted RBP13.69□□□□□ -0.22
TRAPPC11-202ENST00000357207 SFTPA2Q8IWL1 248 aa13.69□□□□□ -0.22
TRAPPC11-202ENST00000357207 ZADH2Q8N4Q0 377 aa13.69□□□□□ -0.22
TRAPPC11-202ENST00000357207 OR13G1Q8NGZ3 307 aa13.69□□□□□ -0.22
TRAPPC11-202ENST00000357207 ADAMTS17Q8TE56 1095 aa13.69□□□□□ -0.22
TRAPPC11-202ENST00000357207 SLC7A10Q9NS82 523 aa13.69□□□□□ -0.22
TRAPPC11-202ENST00000357207 YBX2Q9Y2T7 364 aaKnown RBP13.69□□□□□ -0.22
TRAPPC11-202ENST00000357207 TRGV10A0A0A0MS01 117 aa13.69□□□□□ -0.22
TRAPPC11-202ENST00000357207 CBY3A6NI87 242 aa13.69□□□□□ -0.22
TRAPPC11-202ENST00000357207 DEFB108AA8MXU0 73 aa13.69□□□□□ -0.22
TRAPPC11-202ENST00000357207 CD81P60033 236 aa13.69□□□□□ -0.22
TRAPPC11-202ENST00000357207 KISS1RQ969F8 398 aaPredicted RBP13.69□□□□□ -0.22
TRAPPC11-202ENST00000357207 ANAPC16Q96DE5 110 aa13.69□□□□□ -0.22
TRAPPC11-202ENST00000357207 SF3B5Q9BWJ5 86 aaKnown RBP13.69□□□□□ -0.22
TRAPPC11-202ENST00000357207 C1QL1O75973 258 aa13.69□□□□□ -0.22
TRAPPC11-202ENST00000357207 GNG4P50150 75 aa13.69□□□□□ -0.22
TRAPPC11-202ENST00000357207 PIGYQ3MUY2 71 aa13.69□□□□□ -0.22
TRAPPC11-202ENST00000357207 LINC01590Q5TEZ4 76 aa13.69□□□□□ -0.22
TRAPPC11-202ENST00000357207 C1orf53Q5VUE5 145 aa13.69□□□□□ -0.22
TRAPPC11-202ENST00000357207 BOD1Q96IK1 185 aa13.69□□□□□ -0.22
TRAPPC11-202ENST00000357207 TMEM9BQ9NQ34 198 aa13.69□□□□□ -0.22
TRAPPC11-202ENST00000357207 ZNF784Q8NCA9 323 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC11-202ENST00000357207 OR10G8Q8NGN5 311 aa13.68□□□□□ -0.22
TRAPPC11-202ENST00000357207 RCC2Q9P258 522 aaKnown RBP13.68□□□□□ -0.22
TRAPPC11-202ENST00000357207 SCN2AQ99250 2005 aa13.68□□□□□ -0.22
TRAPPC11-202ENST00000357207 TRAV34A0A0B4J273 112 aa13.68□□□□□ -0.22
TRAPPC11-202ENST00000357207 TOX4O94842 621 aa13.68□□□□□ -0.22
TRAPPC11-202ENST00000357207 RPS4Y1P22090 263 aaKnown RBP13.68□□□□□ -0.22
TRAPPC11-202ENST00000357207 P2RY4P51582 365 aa13.68□□□□□ -0.22
TRAPPC11-202ENST00000357207 ZP1P60852 638 aa13.68□□□□□ -0.22
TRAPPC11-202ENST00000357207 ZP4Q12836 540 aa13.68□□□□□ -0.22
TRAPPC11-202ENST00000357207 RNPS1Q15287 305 aaKnown RBP13.68□□□□□ -0.22
TRAPPC11-202ENST00000357207 SHANK3Q9BYB0 1731 aa13.68□□□□□ -0.22
TRAPPC11-202ENST00000357207 C11orf94C9JXX5 98 aa13.68□□□□□ -0.22
TRAPPC11-202ENST00000357207 RRP8O43159 456 aaKnown RBP13.68□□□□□ -0.22
TRAPPC11-202ENST00000357207 SEMA7AO75326 666 aa13.68□□□□□ -0.22
TRAPPC11-202ENST00000357207 FCER1GP30273 86 aa13.68□□□□□ -0.22
TRAPPC11-202ENST00000357207 PKIAP61925 76 aa13.68□□□□□ -0.22
TRAPPC11-202ENST00000357207 ACSM6Q6P461 480 aa13.68□□□□□ -0.22
TRAPPC11-202ENST00000357207 D2HGDHQ8N465 521 aa13.68□□□□□ -0.22
TRAPPC11-202ENST00000357207 OR4C5Q8NGB2 326 aa13.68□□□□□ -0.22
TRAPPC11-202ENST00000357207 TDRD15B5MCY1 1934 aaKnown RBP13.68□□□□□ -0.22
TRAPPC11-202ENST00000357207 GREB1LQ9C091 1923 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC11-202ENST00000357207 SERTM2A0A1B0GWG4 89 aa13.67□□□□□ -0.22
TRAPPC11-202ENST00000357207 SPINK9Q5DT21 86 aa13.67□□□□□ -0.22
TRAPPC11-202ENST00000357207 AQP10Q96PS8 301 aa13.67□□□□□ -0.22
TRAPPC11-202ENST00000357207 HES4Q9HCC6 221 aa13.67□□□□□ -0.22
TRAPPC11-202ENST00000357207 MSL2Q9HCI7 577 aa13.67□□□□□ -0.22
TRAPPC11-202ENST00000357207 FUT9Q9Y231 359 aa13.67□□□□□ -0.22
TRAPPC11-202ENST00000357207 IGLV1-36A0A0B4J1U3 117 aa13.67□□□□□ -0.22
TRAPPC11-202ENST00000357207 LOC102723971A0A1B0GUV8 181 aa13.67□□□□□ -0.22
TRAPPC11-202ENST00000357207 TCAPO15273 167 aa13.67□□□□□ -0.22
TRAPPC11-202ENST00000357207 KLF4O43474 513 aa13.67□□□□□ -0.22
TRAPPC11-202ENST00000357207 GNB1P62873 340 aa13.67□□□□□ -0.22
TRAPPC11-202ENST00000357207 MEGF10Q96KG7 1140 aa13.67□□□□□ -0.22
TRAPPC11-202ENST00000357207 MPTX1A8MV57 137 aa13.67□□□□□ -0.22
TRAPPC11-202ENST00000357207 GATCO43716 136 aaKnown RBP13.67□□□□□ -0.22
TRAPPC11-202ENST00000357207 GYPAP02724 150 aa13.67□□□□□ -0.22
TRAPPC11-202ENST00000357207 OR1C1Q15619 314 aa13.67□□□□□ -0.22
TRAPPC11-202ENST00000357207 SLC35E3Q7Z769 313 aa13.67□□□□□ -0.22
TRAPPC11-202ENST00000357207 CYB561D1Q8N8Q1 229 aa13.67□□□□□ -0.22
TRAPPC11-202ENST00000357207 ZNF721Q8TF20 911 aa13.67□□□□□ -0.22
TRAPPC11-202ENST00000357207 FKBP11Q9NYL4 201 aa13.67□□□□□ -0.22
TRAPPC11-202ENST00000357207 TRGV5A0A0B4J1U4 118 aa13.67□□□□□ -0.22
TRAPPC11-202ENST00000357207 A0A0G2JK05 382 aa13.67□□□□□ -0.22
TRAPPC11-202ENST00000357207 ISG15P05161 165 aa13.67□□□□□ -0.22
TRAPPC11-202ENST00000357207 TMEM252Q8N6L7 170 aa13.67□□□□□ -0.22
TRAPPC11-202ENST00000357207 MRGPRFQ96AM1 343 aa13.67□□□□□ -0.22
TRAPPC11-202ENST00000357207 POM121Q96HA1 1249 aa13.67□□□□□ -0.22
TRAPPC11-202ENST00000357207 YTHDF2Q9Y5A9 579 aaKnown RBP13.67□□□□□ -0.22
TRAPPC11-202ENST00000357207 A0A1B0GU03 582 aa13.66□□□□□ -0.22
TRAPPC11-202ENST00000357207 M0R1B8 84 aa13.66□□□□□ -0.22
TRAPPC11-202ENST00000357207 SLC31A2O15432 143 aa13.66□□□□□ -0.22
TRAPPC11-202ENST00000357207 DEDDO75618 318 aa13.66□□□□□ -0.22
TRAPPC11-202ENST00000357207 RECKO95980 971 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms