RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 EIF3GO75821 320 aaKnown RBP eCLIP11.74□□□□□ -0.53
LSS-201ENST00000356396 CNOT4O95628 575 aaKnown RBP11.74□□□□□ -0.53
LSS-201ENST00000356396 GCH1P30793 250 aa11.74□□□□□ -0.53
LSS-201ENST00000356396 SSTR5P35346 364 aa11.74□□□□□ -0.53
LSS-201ENST00000356396 TDGF1P3P51864 188 aa11.74□□□□□ -0.53
LSS-201ENST00000356396 SCAND1P57086 179 aa11.74□□□□□ -0.53
LSS-201ENST00000356396 GNMTQ14749 295 aa11.74□□□□□ -0.53
LSS-201ENST00000356396 PPA1Q15181 289 aa11.74□□□□□ -0.53
LSS-201ENST00000356396 ZNF808Q8N4W9 903 aaPredicted RBP11.74□□□□□ -0.53
LSS-201ENST00000356396 COQ8AQ8NI60 647 aa11.74□□□□□ -0.53
LSS-201ENST00000356396 MRGPRDQ8TDS7 321 aa11.74□□□□□ -0.53
LSS-201ENST00000356396 PTX4Q96A99 478 aa11.74□□□□□ -0.53
LSS-201ENST00000356396 TM2D1Q9BX74 207 aa11.74□□□□□ -0.53
LSS-201ENST00000356396 MRPL37Q9BZE1 423 aaKnown RBP11.74□□□□□ -0.53
LSS-201ENST00000356396 OR2S2Q9NQN1 319 aa11.74□□□□□ -0.53
LSS-201ENST00000356396 GPR132Q9UNW8 380 aa11.74□□□□□ -0.53
LSS-201ENST00000356396 RBM7Q9Y580 266 aaKnown RBP11.74□□□□□ -0.53
LSS-201ENST00000356396 TNCP24821 2201 aa11.74□□□□□ -0.53
LSS-201ENST00000356396 MBD3L4A6NDZ8 208 aaPredicted RBP11.73□□□□□ -0.53
LSS-201ENST00000356396 MBD3L3A6NE82 208 aaPredicted RBP11.73□□□□□ -0.53
LSS-201ENST00000356396 MBD3L5A6NJ08 208 aaPredicted RBP11.73□□□□□ -0.53
LSS-201ENST00000356396 ERP29P30040 261 aaKnown RBP11.73□□□□□ -0.53
LSS-201ENST00000356396 UQCRFS1P47985 274 aa11.73□□□□□ -0.53
LSS-201ENST00000356396 GLIPR1P48060 266 aa11.73□□□□□ -0.53
LSS-201ENST00000356396 MBD3L2Q8NHZ7 208 aaPredicted RBP11.73□□□□□ -0.53
LSS-201ENST00000356396 FAM57AQ8TBR7 257 aa11.73□□□□□ -0.53
LSS-201ENST00000356396 MAGT1Q9H0U3 335 aa11.73□□□□□ -0.53
LSS-201ENST00000356396 OR5AC2Q9NZP5 309 aa11.73□□□□□ -0.53
LSS-201ENST00000356396 MBD2Q9UBB5 411 aa11.73□□□□□ -0.53
LSS-201ENST00000356396 FBLN5Q9UBX5 448 aa11.73□□□□□ -0.53
LSS-201ENST00000356396 PPP1R3CQ9UQK1 317 aa11.73□□□□□ -0.53
LSS-201ENST00000356396 A8MXE2 369 aa11.73□□□□□ -0.53
LSS-201ENST00000356396 COX5AP20674 150 aa11.73□□□□□ -0.53
LSS-201ENST00000356396 EPHA1P21709 976 aa11.73□□□□□ -0.53
LSS-201ENST00000356396 BTNL3Q6UXE8 466 aa11.73□□□□□ -0.53
LSS-201ENST00000356396 LYG2Q86SG7 212 aa11.73□□□□□ -0.53
LSS-201ENST00000356396 LHFPL5Q8TAF8 219 aa11.73□□□□□ -0.53
LSS-201ENST00000356396 MUCL1Q96DR8 90 aa11.73□□□□□ -0.53
LSS-201ENST00000356396 OR2V2Q96R30 315 aa11.73□□□□□ -0.53
LSS-201ENST00000356396 OCSTAMPQ9BR26 566 aa11.73□□□□□ -0.53
LSS-201ENST00000356396 RGCCQ9H4X1 137 aa11.73□□□□□ -0.53
LSS-201ENST00000356396 TMEM100Q9NV29 134 aa11.73□□□□□ -0.53
LSS-201ENST00000356396 CSPG4Q6UVK1 2322 aa11.73□□□□□ -0.53
LSS-201ENST00000356396 L7N2F9 121 aa11.73□□□□□ -0.53
LSS-201ENST00000356396 HSPA12AO43301 675 aa11.73□□□□□ -0.53
LSS-201ENST00000356396 UBBP0CG47 229 aa11.73□□□□□ -0.53
LSS-201ENST00000356396 CBR1P16152 277 aa11.73□□□□□ -0.53
LSS-201ENST00000356396 C11orf53Q8IXP5 236 aa11.73□□□□□ -0.53
LSS-201ENST00000356396 ITLN1Q8WWA0 313 aa11.73□□□□□ -0.53
LSS-201ENST00000356396 LSM5Q9Y4Y9 91 aaKnown RBP11.73□□□□□ -0.53
LSS-201ENST00000356396 MCRIP1C9JLW8 97 aa11.72□□□□□ -0.53
LSS-201ENST00000356396 H0YIZ8 118 aa11.72□□□□□ -0.53
LSS-201ENST00000356396 SULT1C2O00338 296 aa11.72□□□□□ -0.53
LSS-201ENST00000356396 CD80P33681 288 aa11.72□□□□□ -0.53
LSS-201ENST00000356396 ARHGDIBP52566 201 aa11.72□□□□□ -0.53
LSS-201ENST00000356396 BSPH1Q075Z2 132 aa11.72□□□□□ -0.53
LSS-201ENST00000356396 IGF2-ASQ6U949 168 aa11.72□□□□□ -0.53
LSS-201ENST00000356396 SLC25A42Q86VD7 318 aa11.72□□□□□ -0.53
LSS-201ENST00000356396 OR5A2Q8NGI9 324 aa11.72□□□□□ -0.53
LSS-201ENST00000356396 PRR7Q8TB68 274 aa11.72□□□□□ -0.53
LSS-201ENST00000356396 LRRC29Q8WV35 223 aa11.72□□□□□ -0.53
LSS-201ENST00000356396 HYLS1Q96M11 299 aa11.72□□□□□ -0.53
LSS-201ENST00000356396 TP53RKQ96S44 253 aa11.72□□□□□ -0.53
LSS-201ENST00000356396 C12orf4Q9NQ89 552 aa11.72□□□□□ -0.53
LSS-201ENST00000356396 ERRFI1Q9UJM3 462 aaPredicted RBP11.72□□□□□ -0.53
LSS-201ENST00000356396 TRAPPC2LQ9UL33 140 aa11.72□□□□□ -0.53
LSS-201ENST00000356396 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.72□□□□□ -0.532e-9■■■□□ 18.4
LSS-201ENST00000356396 PHF1O43189 567 aaPredicted RBP11.72□□□□□ -0.53
LSS-201ENST00000356396 CRYAAP02489 173 aa11.72□□□□□ -0.53
LSS-201ENST00000356396 OR8U9P0C7N5 309 aa11.72□□□□□ -0.53
LSS-201ENST00000356396 EDDM3BP56851 147 aa11.72□□□□□ -0.53
LSS-201ENST00000356396 FGF12P61328 243 aa11.72□□□□□ -0.53
LSS-201ENST00000356396 EXOSC2Q13868 293 aaKnown RBP11.72□□□□□ -0.53
LSS-201ENST00000356396 ZNF818PQ6ZRF7 136 aa11.72□□□□□ -0.53
LSS-201ENST00000356396 OR8U1Q8NH10 309 aa11.72□□□□□ -0.53
LSS-201ENST00000356396 OR1L1Q8NH94 360 aa11.72□□□□□ -0.53
LSS-201ENST00000356396 C15orf40Q8WUR7 153 aa11.72□□□□□ -0.53
LSS-201ENST00000356396 RRNAD1Q96FB5 475 aaKnown RBP11.72□□□□□ -0.53
LSS-201ENST00000356396 BSCL2Q96G97 398 aaPredicted RBP11.72□□□□□ -0.53
LSS-201ENST00000356396 WFIKKN1Q96NZ8 548 aa11.72□□□□□ -0.53
LSS-201ENST00000356396 HEXA-AS1Q9H8Q6 139 aa11.72□□□□□ -0.53
LSS-201ENST00000356396 TAAR3PQ9P1P4 343 aa11.72□□□□□ -0.53
LSS-201ENST00000356396 KIF25Q9UIL4 384 aa11.72□□□□□ -0.53
LSS-201ENST00000356396 NOTCH2Q04721 2471 aa11.72□□□□□ -0.53
LSS-201ENST00000356396 A0A1B0GV50 99 aa11.71□□□□□ -0.53
LSS-201ENST00000356396 SERPINE3A8MV23 424 aa11.71□□□□□ -0.53
LSS-201ENST00000356396 PAX6P26367 422 aa11.71□□□□□ -0.53
LSS-201ENST00000356396 RAB32Q13637 225 aa11.71□□□□□ -0.53
LSS-201ENST00000356396 RGS7BPQ6MZT1 257 aaPredicted RBP11.71□□□□□ -0.53
LSS-201ENST00000356396 ZNF546Q86UE3 836 aa11.71□□□□□ -0.53
LSS-201ENST00000356396 NARFLQ9H6Q4 476 aa11.71□□□□□ -0.53
LSS-201ENST00000356396 ZNF391Q9UJN7 358 aa11.71□□□□□ -0.53
LSS-201ENST00000356396 PRB1P04280 392 aa11.71□□□□□ -0.54
LSS-201ENST00000356396 PMELP40967 661 aa11.71□□□□□ -0.54
LSS-201ENST00000356396 BEND4Q6ZU67 534 aa11.71□□□□□ -0.54
LSS-201ENST00000356396 GAPTQ8N292 157 aa11.71□□□□□ -0.54
LSS-201ENST00000356396 OR52L2PQ8NGH6 319 aa11.71□□□□□ -0.54
LSS-201ENST00000356396 RTN4IP1Q8WWV3 396 aaPredicted RBP11.71□□□□□ -0.54
LSS-201ENST00000356396 SLC25A21Q9BQT8 299 aaPredicted RBP11.71□□□□□ -0.54
LSS-201ENST00000356396 ITGB1BP2Q9UKP3 347 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms