RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 HSD17B13Q7Z5P4 300 aaPredicted RBP5.7□□□□□ -1.5
UPF2-201ENST00000356352 LINC01555Q8NAE3 123 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 OR2I1PQ8NGU4 316 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 SLIRPQ9GZT3 109 aaKnown RBP5.7□□□□□ -1.5
UPF2-201ENST00000356352 TMEM30AQ9NV96 361 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 VSIG4Q9Y279 399 aa5.7□□□□□ -1.5
UPF2-201ENST00000356352 MGPP08493 103 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 TMEM33P57088 247 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 ATG4DQ86TL0 474 aaPredicted RBP5.69□□□□□ -1.5
UPF2-201ENST00000356352 RASL10BQ96S79 203 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 HIGD1AQ9Y241 93 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 BTAF1O14981 1849 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 KIF13AQ9H1H9 1805 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 USP54Q70EL1 1684 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 A0A1W2PS18 150 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 C16orf97H3BN30 126 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 RPL36A-HNRNPH2H7BZ11 118 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 SYNGR1O43759 233 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 CDS2O95674 445 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 HPXP02790 462 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 CTLA4P16410 223 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 GAMTQ14353 236 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 C11orf91Q3C1V1 193 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 DMKNQ6E0U4 476 aaPredicted RBP5.69□□□□□ -1.5
UPF2-201ENST00000356352 CALHM1Q8IU99 346 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 OR8I2Q8N0Y5 310 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 LSMEM1Q8N8F7 131 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 OR8D4Q8NGM9 314 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 OR4X1Q8NH49 305 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 RBM14Q96PK6 669 aaKnown RBP5.69□□□□□ -1.5
UPF2-201ENST00000356352 GPR35Q9HC97 309 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 OR2W1Q9Y3N9 320 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 ALS2Q96Q42 1657 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 OR2W5A6NFC9 320 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 HELTA6NFD8 242 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 FAM157AC9JC47 383 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 CTGFP29279 349 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 RELBQ01201 579 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 SPINK9Q5DT21 86 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 C1orf185Q5T7R7 199 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 SPINK14Q6IE38 97 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 TEPPQ6URK8 271 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 HARBI1Q96MB7 349 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 RNF122Q9H9V4 155 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 PRSS50Q9UI38 385 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 COL22A1Q8NFW1 1626 aaPredicted RBP5.69□□□□□ -1.5
UPF2-201ENST00000356352 ASPDHA6ND91 283 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 GEMIN2O14893 280 aaKnown RBP5.69□□□□□ -1.5
UPF2-201ENST00000356352 SPINK4O60575 86 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 SRSF10O75494 262 aaKnown RBP5.69□□□□□ -1.5
UPF2-201ENST00000356352 SIGLEC14Q08ET2 396 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 KIAA0040Q15053 153 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 INPP5JQ15735 1006 aaPredicted RBP5.69□□□□□ -1.5
UPF2-201ENST00000356352 HIST3H3Q16695 136 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 FAM109BQ6ICB4 259 aaPredicted RBP5.69□□□□□ -1.5
UPF2-201ENST00000356352 SLC35E3Q7Z769 313 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 MRGPRGQ86SM5 289 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 GBGT1Q8N5D6 347 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 C17orf47Q8NEP4 570 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 SCMH1Q96GD3 660 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 TMUB1Q9BVT8 246 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 WDR13Q9H1Z4 485 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 CLN8Q9UBY8 286 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 MRM2Q9UI43 246 aaKnown RBP5.69□□□□□ -1.5
UPF2-201ENST00000356352 R4GN57 208 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 CDRT15L2A8MXV6 281 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 CCL2P13500 99 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 MAGEA5P43359 124 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 UQCRFS1P47985 274 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 SRSF9Q13242 221 aaKnown RBP eCLIP5.69□□□□□ -1.5
UPF2-201ENST00000356352 LGALSLQ3ZCW2 172 aaPredicted RBP5.69□□□□□ -1.5
UPF2-201ENST00000356352 FAM209AQ5JX71 171 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 EBLN2Q6P2I7 272 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 VSTM2LQ96N03 204 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 MARVELD1Q9BSK0 173 aa5.69□□□□□ -1.5
UPF2-201ENST00000356352 NXF2Q9GZY0 626 aaKnown RBP5.69□□□□□ -1.5
UPF2-201ENST00000356352 AP4M1O00189 453 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 UBE2L6O14933 153 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 ZNF253O75346 499 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 PPYP01298 95 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 APCSP02743 223 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 CD40P25942 277 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 FGF8P55075 233 aaPredicted RBP5.68□□□□□ -1.5
UPF2-201ENST00000356352 ZXDAP98168 799 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 KRTCAP3Q53RY4 240 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 MESTQ5EB52 335 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 SLC35E4Q6ICL7 350 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 TMEM92Q6UXU6 159 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 C16orf82Q7Z2V1 217 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 VN1R4Q7Z5H5 301 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 GCSAMQ8N6F7 178 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 MIEN1Q9BRT3 115 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 ZNF71Q9NQZ8 489 aaPredicted RBP5.68□□□□□ -1.5
UPF2-201ENST00000356352 SERGEFQ9UGK8 458 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 ZFP30Q9Y2G7 519 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 PAPPAQ13219 1627 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 TMEM238LA0A1B0GVL6 79 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 A6NJY4 79 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 COL9A1P20849 921 aa5.68□□□□□ -1.5
UPF2-201ENST00000356352 TSPAN7P41732 249 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms