RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 RANP62826 216 aaKnown RBP15.82■□□□□ 0.12
COL18A1-202ENST00000355480 HARBI1Q96MB7 349 aa15.82■□□□□ 0.12
COL18A1-202ENST00000355480 OR2T8A6NH00 312 aa15.82■□□□□ 0.12
COL18A1-202ENST00000355480 C1orf185Q5T7R7 199 aa15.82■□□□□ 0.12
COL18A1-202ENST00000355480 SLC23A3Q6PIS1 610 aa15.82■□□□□ 0.12
COL18A1-202ENST00000355480 RBPMS2Q6ZRY4 209 aaKnown RBP15.82■□□□□ 0.12
COL18A1-202ENST00000355480 DYNLRB2Q8TF09 96 aa15.82■□□□□ 0.12
COL18A1-202ENST00000355480 PCGF1Q9BSM1 259 aa15.82■□□□□ 0.12
COL18A1-202ENST00000355480 SLC35B3Q9H1N7 401 aa15.82■□□□□ 0.12
COL18A1-202ENST00000355480 TMEM167BQ9NRX6 74 aa15.82■□□□□ 0.12
COL18A1-202ENST00000355480 PRSS44E7EML9 344 aa15.81■□□□□ 0.12
COL18A1-202ENST00000355480 APELAP0DMC3 54 aa15.81■□□□□ 0.12
COL18A1-202ENST00000355480 ZFP36L2P47974 494 aaKnown RBP15.81■□□□□ 0.12
COL18A1-202ENST00000355480 SPRED2Q7Z698 418 aa15.81■□□□□ 0.12
COL18A1-202ENST00000355480 Q8WTZ3 238 aa15.81■□□□□ 0.12
COL18A1-202ENST00000355480 ABHD1Q96SE0 405 aa15.81■□□□□ 0.12
COL18A1-202ENST00000355480 ASCL3Q9NQ33 180 aa15.81■□□□□ 0.12
COL18A1-202ENST00000355480 CCL28Q9NRJ3 127 aa15.81■□□□□ 0.12
COL18A1-202ENST00000355480 TMEM210A6NLX4 147 aa15.81■□□□□ 0.12
COL18A1-202ENST00000355480 TMEM33P57088 247 aa15.81■□□□□ 0.12
COL18A1-202ENST00000355480 TOMM20LQ6UXN7 152 aa15.81■□□□□ 0.12
COL18A1-202ENST00000355480 B4E171 279 aa15.81■□□□□ 0.12
COL18A1-202ENST00000355480 FFAR1O14842 300 aa15.81■□□□□ 0.12
COL18A1-202ENST00000355480 FOXS1O43638 330 aa15.81■□□□□ 0.12
COL18A1-202ENST00000355480 PEBP1P30086 187 aaKnown RBP15.81■□□□□ 0.12
COL18A1-202ENST00000355480 TSPAN7P41732 249 aa15.81■□□□□ 0.12
COL18A1-202ENST00000355480 ECSCRQ19T08 205 aa15.81■□□□□ 0.12
COL18A1-202ENST00000355480 C5orf17Q8NAS9 161 aa15.81■□□□□ 0.12
COL18A1-202ENST00000355480 OR5A2Q8NGI9 324 aa15.81■□□□□ 0.12
COL18A1-202ENST00000355480 MOSPD3O75425 235 aa15.81■□□□□ 0.12
COL18A1-202ENST00000355480 PRF1P14222 555 aa15.81■□□□□ 0.12
COL18A1-202ENST00000355480 PIGYQ3MUY2 71 aa15.81■□□□□ 0.12
COL18A1-202ENST00000355480 CLLU1Q5K131 121 aa15.81■□□□□ 0.12
COL18A1-202ENST00000355480 ZNF721Q8TF20 911 aa15.81■□□□□ 0.12
COL18A1-202ENST00000355480 PARD6AQ9NPB6 346 aa15.81■□□□□ 0.12
COL18A1-202ENST00000355480 SURF2Q15527 256 aaPredicted RBP15.8■□□□□ 0.12
COL18A1-202ENST00000355480 MPV17LQ2QL34 196 aa15.8■□□□□ 0.12
COL18A1-202ENST00000355480 RPS4Y2Q8TD47 263 aa15.8■□□□□ 0.12
COL18A1-202ENST00000355480 TRAV39A0A0B4J263 110 aa15.8■□□□□ 0.12
COL18A1-202ENST00000355480 CLEC18BQ6UXF7 455 aa15.8■□□□□ 0.12
COL18A1-202ENST00000355480 SP7Q8TDD2 431 aaPredicted RBP15.8■□□□□ 0.12
COL18A1-202ENST00000355480 GPR6P46095 362 aaPredicted RBP15.8■□□□□ 0.12
COL18A1-202ENST00000355480 ID4P47928 161 aa15.8■□□□□ 0.12
COL18A1-202ENST00000355480 NAAAQ02083 359 aa15.8■□□□□ 0.12
COL18A1-202ENST00000355480 RNF212Q495C1 297 aa15.8■□□□□ 0.12
COL18A1-202ENST00000355480 TMEM97Q5BJF2 176 aa15.8■□□□□ 0.12
COL18A1-202ENST00000355480 OR8I2Q8N0Y5 310 aa15.8■□□□□ 0.12
COL18A1-202ENST00000355480 NXF2Q9GZY0 626 aaKnown RBP15.8■□□□□ 0.12
COL18A1-202ENST00000355480 PRNDQ9UKY0 176 aa15.8■□□□□ 0.12
COL18A1-202ENST00000355480 BMPR1BO00238 502 aa15.8■□□□□ 0.12
COL18A1-202ENST00000355480 CHST1O43916 411 aa15.8■□□□□ 0.12
COL18A1-202ENST00000355480 PPYP01298 95 aa15.8■□□□□ 0.12
COL18A1-202ENST00000355480 FOXL2P58012 376 aa15.8■□□□□ 0.12
COL18A1-202ENST00000355480 PIPOXQ9P0Z9 390 aa15.8■□□□□ 0.12
COL18A1-202ENST00000355480 RABAC1Q9UI14 185 aa15.8■□□□□ 0.12
COL18A1-202ENST00000355480 RREB1Q92766 1687 aa15.8■□□□□ 0.12
COL18A1-202ENST00000355480 TO15178 435 aa15.79■□□□□ 0.12
COL18A1-202ENST00000355480 FTH1P19P0C7X4 201 aa15.79■□□□□ 0.12
COL18A1-202ENST00000355480 HLA-DRB3P79483 266 aa15.79■□□□□ 0.12
COL18A1-202ENST00000355480 SSMEM1Q8WWF3 244 aa15.79■□□□□ 0.12
COL18A1-202ENST00000355480 DCAF16Q9NXF7 216 aa15.79■□□□□ 0.12
COL18A1-202ENST00000355480 DTX4Q9Y2E6 619 aa15.79■□□□□ 0.12
COL18A1-202ENST00000355480 HPXP02790 462 aa15.79■□□□□ 0.12
COL18A1-202ENST00000355480 TMEM52Q8NDY8 209 aa15.79■□□□□ 0.12
COL18A1-202ENST00000355480 LRRC3BQ96PB8 259 aa15.79■□□□□ 0.12
COL18A1-202ENST00000355480 SLC25A10Q9UBX3 287 aaPredicted RBP15.79■□□□□ 0.12
COL18A1-202ENST00000355480 VSIG4Q9Y279 399 aa15.79■□□□□ 0.12
COL18A1-202ENST00000355480 KIAA1551Q9HCM1 1747 aa15.79■□□□□ 0.12
COL18A1-202ENST00000355480 DNPH1O43598 174 aa15.79■□□□□ 0.12
COL18A1-202ENST00000355480 PSG5Q15238 335 aa15.79■□□□□ 0.12
COL18A1-202ENST00000355480 MMDQ15546 238 aa15.79■□□□□ 0.12
COL18A1-202ENST00000355480 ZNF385AQ96PM9 386 aaKnown RBP15.79■□□□□ 0.12
COL18A1-202ENST00000355480 OR2J1Q9GZK6 312 aa15.79■□□□□ 0.12
COL18A1-202ENST00000355480 WASHC3Q9Y3C0 194 aa15.79■□□□□ 0.12
COL18A1-202ENST00000355480 PPIAL4EA0A075B759 164 aa15.79■□□□□ 0.12
COL18A1-202ENST00000355480 PPIAL4DF5H284 164 aa15.79■□□□□ 0.12
COL18A1-202ENST00000355480 PPIAL4FP0DN26 164 aa15.79■□□□□ 0.12
COL18A1-202ENST00000355480 AESQ08117 197 aa15.79■□□□□ 0.12
COL18A1-202ENST00000355480 GTF2H5Q6ZYL4 71 aa15.79■□□□□ 0.12
COL18A1-202ENST00000355480 OR4A4PQ8NGN8 299 aa15.79■□□□□ 0.12
COL18A1-202ENST00000355480 VPS25Q9BRG1 176 aa15.79■□□□□ 0.12
COL18A1-202ENST00000355480 PPIAL4AQ9Y536 164 aa15.79■□□□□ 0.12
COL18A1-202ENST00000355480 KCNMB1Q16558 191 aa15.79■□□□□ 0.12
COL18A1-202ENST00000355480 FAM78BQ5VT40 261 aa15.79■□□□□ 0.12
COL18A1-202ENST00000355480 FAHD2BQ6P2I3 314 aaPredicted RBP15.79■□□□□ 0.12
COL18A1-202ENST00000355480 WFDC3Q8IUB2 231 aa15.79■□□□□ 0.12
COL18A1-202ENST00000355480 OR4P4Q8NGL7 312 aa15.79■□□□□ 0.12
COL18A1-202ENST00000355480 FAHD2AQ96GK7 314 aa15.79■□□□□ 0.12
COL18A1-202ENST00000355480 FAM87AP0C7U9 286 aa15.78■□□□□ 0.12
COL18A1-202ENST00000355480 HOXA4Q00056 320 aaPredicted RBP15.78■□□□□ 0.12
COL18A1-202ENST00000355480 RNF133Q8WVZ7 376 aa15.78■□□□□ 0.12
COL18A1-202ENST00000355480 P2RY1P47900 373 aa15.78■□□□□ 0.12
COL18A1-202ENST00000355480 CLRN3Q8NCR9 226 aa15.78■□□□□ 0.12
COL18A1-202ENST00000355480 ZNF501Q96CX3 271 aaPredicted RBP15.78■□□□□ 0.12
COL18A1-202ENST00000355480 RNF122Q9H9V4 155 aa15.78■□□□□ 0.12
COL18A1-202ENST00000355480 PCDHGA9Q9Y5G4 932 aaKnown RBP15.78■□□□□ 0.12
COL18A1-202ENST00000355480 CD40P25942 277 aa15.78■□□□□ 0.12
COL18A1-202ENST00000355480 ZNF154Q13106 437 aa15.78■□□□□ 0.12
COL18A1-202ENST00000355480 ORM1P02763 201 aa15.78■□□□□ 0.12
COL18A1-202ENST00000355480 VDAC1P21796 283 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms