RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 ZNF514Q96K75 400 aaPredicted RBP4.68□□□□□ -1.66
CD47-201ENST00000355354 PBOV1Q9GZY1 135 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 TMEM45AQ9NWC5 275 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 PRSS50Q9UI38 385 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 SOX21Q9Y651 276 aaPredicted RBP4.68□□□□□ -1.66
CD47-201ENST00000355354 ALG1L2C9J202 215 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 GRNP28799 593 aaKnown RBP4.68□□□□□ -1.66
CD47-201ENST00000355354 PPICP45877 212 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 INPP1P49441 399 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 CEBPGP53567 150 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 AWAT1Q58HT5 328 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 HOGA1Q86XE5 327 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 PIP4P2Q8N4L2 257 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 NKAIN3Q8N8D7 197 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 ZFP62Q8NB50 900 aaPredicted RBP4.68□□□□□ -1.66
CD47-201ENST00000355354 OR52L1Q8NGH7 329 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 MRPL48Q96GC5 212 aaKnown RBP4.68□□□□□ -1.66
CD47-201ENST00000355354 TAAR6Q96RI8 345 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 AK3Q9UIJ7 227 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 SCP2D1Q9UJQ7 156 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 TNFSF11O14788 317 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 LOXP28300 417 aaPredicted RBP4.68□□□□□ -1.66
CD47-201ENST00000355354 CALCRP30988 508 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 ZNF154Q13106 437 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 RTL6Q6ICC9 239 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 BTNL8Q6UX41 500 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 SEM1Q6ZVN7 128 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 PEG10Q86TG7 708 aaKnown RBP4.68□□□□□ -1.66
CD47-201ENST00000355354 DEFB126Q9BYW3 111 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 EXO5Q9H790 373 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 WDR54Q9H977 334 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 PHPT1Q9NRX4 125 aaPredicted RBP4.68□□□□□ -1.66
CD47-201ENST00000355354 CALML5Q9NZT1 146 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 DOK5Q9P104 306 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 OR52A1Q9UKL2 312 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 COMPP49747 757 aaPredicted RBP4.68□□□□□ -1.66
CD47-201ENST00000355354 KHKP50053 298 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 TCTAP57738 103 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 ADORA2A-AS1P86434 159 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 C10orf55Q5SWW7 151 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 ABLIM2Q6H8Q1 611 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 SAXO1Q8IYX7 474 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 TMEM123Q8N131 208 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 RAB42Q8N4Z0 105 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 POC1AQ8NBT0 407 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 PLEKHA1Q9HB21 404 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 NOP16Q9Y3C1 178 aaKnown RBP4.68□□□□□ -1.66
CD47-201ENST00000355354 FAT3Q8TDW7 4589 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 DEFB108AA8MXU0 73 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 F5H0A9 414 aaPredicted RBP4.67□□□□□ -1.66
CD47-201ENST00000355354 H3BTX0 84 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 PGA5P0DJD9 388 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 PAX1P15863 534 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 ZNF32P17041 273 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 ITGA3P26006 1051 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 PDZK1IP1Q13113 114 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 P2RY6Q15077 328 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 GPR157Q5UAW9 335 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 SPATA31B1PQ5VZV4 182 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 RHBDD2Q6NTF9 364 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 OR6K3Q8NGY3 331 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 MRGPRX4Q96LA9 322 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 IMMP1LQ96LU5 166 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 OR5B2Q96R09 309 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 CCL28Q9NRJ3 127 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 CUTCQ9NTM9 273 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 TIMM10BQ9Y5J6 103 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 IGHV3OR16-8A0A075B7F1 116 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 IGHV3-43A0A0B4J1X8 118 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 SPINK4O60575 86 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 OR4A8P0C604 315 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 IGHV3-43DP0DP04 118 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 CCNOP22674 350 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 SSX2Q16385 188 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 MIDNQ504T8 468 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 C1QL4Q86Z23 238 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 GPALPP1Q8IXQ4 340 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 KCNRGQ8N5I3 272 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 SLC35G3Q8N808 338 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 FDCSPQ8NFU4 85 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 C14orf79Q96F83 325 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 C14orf144Q96I85 54 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 DPAGT1Q9H3H5 408 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 ELL3Q9HB65 397 aaPredicted RBP4.67□□□□□ -1.66
CD47-201ENST00000355354 CHMP1AQ9HD42 196 aaPredicted RBP4.67□□□□□ -1.66
CD47-201ENST00000355354 TAS2R3Q9NYW6 316 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 KIF25Q9UIL4 384 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 SLC31A2O15432 143 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 ZNF208O43345 1280 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 KRT33AO76009 404 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 MMP7P09237 267 aaPredicted RBP4.67□□□□□ -1.66
CD47-201ENST00000355354 MGMTP16455 207 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 BLVRBP30043 206 aaPredicted RBP4.67□□□□□ -1.66
CD47-201ENST00000355354 PRSS3P35030 304 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 MMP16P51512 607 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 C21orf62-AS1Q17RA5 79 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 FAM90A2PQ658T7 463 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 ARHGAP11AQ6P4F7 1023 aa4.67□□□□□ -1.66
CD47-201ENST00000355354 RPL22L1Q6P5R6 122 aaKnown RBP4.67□□□□□ -1.66
CD47-201ENST00000355354 NECAP1Q8NC96 275 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms