RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 ACTBP60709 375 aa16.77■□□□□ 0.27
SIGMAR1-202ENST00000353468 ACTG1P63261 375 aa16.77■□□□□ 0.27
SIGMAR1-202ENST00000353468 IL13RA1P78552 427 aa16.77■□□□□ 0.27
SIGMAR1-202ENST00000353468 GRK1Q15835 563 aa16.77■□□□□ 0.27
SIGMAR1-202ENST00000353468 DUX4L9Q6RFH8 374 aaPredicted RBP16.77■□□□□ 0.27
SIGMAR1-202ENST00000353468 LYPD2Q6UXB3 125 aa16.77■□□□□ 0.27
SIGMAR1-202ENST00000353468 MUC20Q8N307 709 aaPredicted RBP16.77■□□□□ 0.27
SIGMAR1-202ENST00000353468 ZNF525Q8N782 197 aa16.77■□□□□ 0.27
SIGMAR1-202ENST00000353468 FAM216BQ8N7L0 139 aa16.77■□□□□ 0.27
SIGMAR1-202ENST00000353468 OR5D13Q8NGL4 314 aa16.77■□□□□ 0.27
SIGMAR1-202ENST00000353468 RIMS4Q9H426 269 aaPredicted RBP16.77■□□□□ 0.27
SIGMAR1-202ENST00000353468 BARX1Q9HBU1 254 aaPredicted RBP16.77■□□□□ 0.27
SIGMAR1-202ENST00000353468 CHMP1AQ9HD42 196 aaPredicted RBP16.77■□□□□ 0.27
SIGMAR1-202ENST00000353468 C12orf4Q9NQ89 552 aa16.77■□□□□ 0.27
SIGMAR1-202ENST00000353468 IFT46Q9NQC8 304 aa16.77■□□□□ 0.27
SIGMAR1-202ENST00000353468 ING3Q9NXR8 418 aa16.77■□□□□ 0.27
SIGMAR1-202ENST00000353468 DUX4Q9UBX2 424 aa16.77■□□□□ 0.27
SIGMAR1-202ENST00000353468 ZNF230Q9UIE0 474 aaPredicted RBP16.77■□□□□ 0.27
SIGMAR1-202ENST00000353468 EDARQ9UNE0 448 aa16.77■□□□□ 0.27
SIGMAR1-202ENST00000353468 ADAM20O43506 726 aa16.76■□□□□ 0.27
SIGMAR1-202ENST00000353468 NAPSAO96009 420 aa16.76■□□□□ 0.27
SIGMAR1-202ENST00000353468 CSN2P05814 226 aa16.76■□□□□ 0.27
SIGMAR1-202ENST00000353468 GSTT2BP0CG30 244 aa16.76■□□□□ 0.27
SIGMAR1-202ENST00000353468 SELLP14151 372 aa16.76■□□□□ 0.27
SIGMAR1-202ENST00000353468 DTYMKP23919 212 aa16.76■□□□□ 0.27
SIGMAR1-202ENST00000353468 GPR6P46095 362 aaPredicted RBP16.76■□□□□ 0.27
SIGMAR1-202ENST00000353468 ZNF57Q68EA5 555 aaPredicted RBP16.76■□□□□ 0.27
SIGMAR1-202ENST00000353468 ZNF497Q6ZNH5 498 aa16.76■□□□□ 0.27
SIGMAR1-202ENST00000353468 TMEM185AQ8NFB2 350 aa16.76■□□□□ 0.27
SIGMAR1-202ENST00000353468 ST6GALNAC5Q9BVH7 336 aa16.76■□□□□ 0.27
SIGMAR1-202ENST00000353468 FAM234AQ9H0X4 552 aa16.76■□□□□ 0.27
SIGMAR1-202ENST00000353468 KAAG1Q9UBP8 84 aa16.76■□□□□ 0.27
SIGMAR1-202ENST00000353468 MGST3O14880 152 aa16.75■□□□□ 0.27
SIGMAR1-202ENST00000353468 FCGR3AP08637 254 aa16.75■□□□□ 0.27
SIGMAR1-202ENST00000353468 RCVRNP35243 200 aa16.75■□□□□ 0.27
SIGMAR1-202ENST00000353468 PDLIM4P50479 330 aa16.75■□□□□ 0.27
SIGMAR1-202ENST00000353468 AESQ08117 197 aa16.75■□□□□ 0.27
SIGMAR1-202ENST00000353468 TMEM155Q4W5P6 130 aa16.75■□□□□ 0.27
SIGMAR1-202ENST00000353468 RSBN1Q5VWQ0 802 aaPredicted RBP16.75■□□□□ 0.27
SIGMAR1-202ENST00000353468 SLC35E4Q6ICL7 350 aa16.75■□□□□ 0.27
SIGMAR1-202ENST00000353468 GAPTQ8N292 157 aa16.75■□□□□ 0.27
SIGMAR1-202ENST00000353468 TOMM5Q8N4H5 51 aa16.75■□□□□ 0.27
SIGMAR1-202ENST00000353468 MRPL30Q8TCC3 161 aaKnown RBP16.75■□□□□ 0.27
SIGMAR1-202ENST00000353468 PERPQ96FX8 193 aa16.75■□□□□ 0.27
SIGMAR1-202ENST00000353468 GSX2Q9BZM3 304 aa16.75■□□□□ 0.27
SIGMAR1-202ENST00000353468 TAS2R8Q9NYW2 309 aa16.75■□□□□ 0.27
SIGMAR1-202ENST00000353468 ANAPC10Q9UM13 185 aa16.75■□□□□ 0.27
SIGMAR1-202ENST00000353468 LINC00854A0A1B0GVQ3 168 aa16.74■□□□□ 0.27
SIGMAR1-202ENST00000353468 ANKRD20A5PA0PJZ0 165 aa16.74■□□□□ 0.27
SIGMAR1-202ENST00000353468 H7C1Q1 480 aa16.74■□□□□ 0.27
SIGMAR1-202ENST00000353468 ECDO95905 644 aaPredicted RBP16.74■□□□□ 0.27
SIGMAR1-202ENST00000353468 MT-ND4P03905 459 aa16.74■□□□□ 0.27
SIGMAR1-202ENST00000353468 NAT1P18440 290 aa16.74■□□□□ 0.27
SIGMAR1-202ENST00000353468 KRBOX4Q5JUW0 171 aa16.74■□□□□ 0.27
SIGMAR1-202ENST00000353468 HOGA1Q86XE5 327 aa16.74■□□□□ 0.27
SIGMAR1-202ENST00000353468 OR4K15Q8NH41 348 aa16.74■□□□□ 0.27
SIGMAR1-202ENST00000353468 MAFIPQ8WZ33 124 aa16.74■□□□□ 0.27
SIGMAR1-202ENST00000353468 COQ2Q96H96 371 aa16.74■□□□□ 0.27
SIGMAR1-202ENST00000353468 TRBV6-6A0A0A6YYG2 114 aa16.73■□□□□ 0.27
SIGMAR1-202ENST00000353468 TMEM30CPA0ZSE6 113 aa16.73■□□□□ 0.27
SIGMAR1-202ENST00000353468 CEACAM18A8MTB9 384 aa16.73■□□□□ 0.27
SIGMAR1-202ENST00000353468 GIFP27352 417 aa16.73■□□□□ 0.27
SIGMAR1-202ENST00000353468 AP3S2P59780 193 aa16.73■□□□□ 0.27
SIGMAR1-202ENST00000353468 PAX5Q02548 391 aa16.73■□□□□ 0.27
SIGMAR1-202ENST00000353468 KLF9Q13886 244 aaPredicted RBP16.73■□□□□ 0.27
SIGMAR1-202ENST00000353468 Q6ZPA2 131 aa16.73■□□□□ 0.27
SIGMAR1-202ENST00000353468 SETD6Q8TBK2 473 aa16.73■□□□□ 0.27
SIGMAR1-202ENST00000353468 ZNF107Q9UII5 783 aaPredicted RBP16.73■□□□□ 0.27
SIGMAR1-202ENST00000353468 FASNP49327 2511 aaKnown RBP16.73■□□□□ 0.27
SIGMAR1-202ENST00000353468 CSF1P09603 554 aa16.72■□□□□ 0.27
SIGMAR1-202ENST00000353468 DNASE1P24855 282 aa16.72■□□□□ 0.27
SIGMAR1-202ENST00000353468 EDDM3AQ14507 147 aa16.72■□□□□ 0.27
SIGMAR1-202ENST00000353468 OR52W1Q6IF63 320 aa16.72■□□□□ 0.27
SIGMAR1-202ENST00000353468 GDPD3Q7L5L3 318 aa16.72■□□□□ 0.27
SIGMAR1-202ENST00000353468 TMEM229BQ8NBD8 167 aa16.72■□□□□ 0.27
SIGMAR1-202ENST00000353468 BEST4Q8NFU0 473 aa16.72■□□□□ 0.27
SIGMAR1-202ENST00000353468 SNAPC3Q92966 411 aa16.72■□□□□ 0.27
SIGMAR1-202ENST00000353468 Q9N2K0 584 aa16.72■□□□□ 0.27
SIGMAR1-202ENST00000353468 CTSZQ9UBR2 303 aa16.72■□□□□ 0.27
SIGMAR1-202ENST00000353468 SLC25A10Q9UBX3 287 aaPredicted RBP16.72■□□□□ 0.27
SIGMAR1-202ENST00000353468 MIOXQ9UGB7 285 aa16.72■□□□□ 0.27
SIGMAR1-202ENST00000353468 KIF25Q9UIL4 384 aa16.72■□□□□ 0.27
SIGMAR1-202ENST00000353468 SPG11Q96JI7 2443 aa16.72■□□□□ 0.27
SIGMAR1-202ENST00000353468 POM121CA8CG34 1229 aa16.72■□□□□ 0.27
SIGMAR1-202ENST00000353468 PLA2G10O15496 165 aa16.72■□□□□ 0.27
SIGMAR1-202ENST00000353468 NDUFB3O43676 98 aa16.72■□□□□ 0.27
SIGMAR1-202ENST00000353468 GLIPR1P48060 266 aa16.72■□□□□ 0.27
SIGMAR1-202ENST00000353468 TAS2R19P59542 299 aa16.72■□□□□ 0.27
SIGMAR1-202ENST00000353468 SRSF7Q16629 238 aaKnown RBP eCLIP16.72■□□□□ 0.27
SIGMAR1-202ENST00000353468 LRRC10Q5BKY1 277 aa16.72■□□□□ 0.27
SIGMAR1-202ENST00000353468 ZNF880Q6PDB4 577 aa16.72■□□□□ 0.27
SIGMAR1-202ENST00000353468 SPICQ8N5J4 248 aa16.72■□□□□ 0.27
SIGMAR1-202ENST00000353468 TPRX1Q8N7U7 411 aa16.72■□□□□ 0.27
SIGMAR1-202ENST00000353468 CCDC107Q8WV48 283 aa16.72■□□□□ 0.27
SIGMAR1-202ENST00000353468 BEX4Q9NWD9 120 aaPredicted RBP16.72■□□□□ 0.27
SIGMAR1-202ENST00000353468 TRAPPC2LQ9UL33 140 aa16.72■□□□□ 0.27
SIGMAR1-202ENST00000353468 TBC1D24Q9ULP9 559 aa16.72■□□□□ 0.27
SIGMAR1-202ENST00000353468 FBN2P35556 2912 aa16.72■□□□□ 0.27
SIGMAR1-202ENST00000353468 ARID1AO14497 2285 aa16.71■□□□□ 0.27
SIGMAR1-202ENST00000353468 IGKV1D-8A0A087WSZ0 117 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms