RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 KIF26BQ2KJY2 2108 aa9.26□□□□□ -0.93
CAPN3-203ENST00000349748 FAM78BQ5VT40 261 aa9.26□□□□□ -0.93
CAPN3-203ENST00000349748 ZNF787Q6DD87 383 aa9.26□□□□□ -0.93
CAPN3-203ENST00000349748 OR2C3Q8N628 320 aa9.26□□□□□ -0.93
CAPN3-203ENST00000349748 RHBDD1Q8TEB9 315 aa9.26□□□□□ -0.93
CAPN3-203ENST00000349748 SAMD10Q9BYL1 202 aa9.26□□□□□ -0.93
CAPN3-203ENST00000349748 WNT10AQ9GZT5 417 aa9.26□□□□□ -0.93
CAPN3-203ENST00000349748 SOHLH2Q9NX45 425 aa9.26□□□□□ -0.93
CAPN3-203ENST00000349748 B3GALT1Q9Y5Z6 326 aa9.26□□□□□ -0.93
CAPN3-203ENST00000349748 PTPRSQ13332 1948 aa9.26□□□□□ -0.93
CAPN3-203ENST00000349748 PLXNA2O75051 1894 aa9.26□□□□□ -0.93
CAPN3-203ENST00000349748 SCN2AQ99250 2005 aa9.26□□□□□ -0.93
CAPN3-203ENST00000349748 TNFRSF10CO14798 259 aa9.25□□□□□ -0.93
CAPN3-203ENST00000349748 HLA-HP01893 362 aa9.25□□□□□ -0.93
CAPN3-203ENST00000349748 HPNP05981 417 aa9.25□□□□□ -0.93
CAPN3-203ENST00000349748 ZNF658BQ4V348 819 aaPredicted RBP9.25□□□□□ -0.93
CAPN3-203ENST00000349748 DMRTC1Q5HYR2 192 aa9.25□□□□□ -0.93
CAPN3-203ENST00000349748 C1orf140Q5VVS0 124 aa9.25□□□□□ -0.93
CAPN3-203ENST00000349748 NIT1Q86X76 327 aa9.25□□□□□ -0.93
CAPN3-203ENST00000349748 SHISA5Q8N114 240 aa9.25□□□□□ -0.93
CAPN3-203ENST00000349748 CTHRC1Q96CG8 243 aa9.25□□□□□ -0.93
CAPN3-203ENST00000349748 PARLQ9H300 379 aa9.25□□□□□ -0.93
CAPN3-203ENST00000349748 HS3ST2Q9Y278 367 aa9.25□□□□□ -0.93
CAPN3-203ENST00000349748 IGKV1D-8A0A087WSZ0 117 aa9.25□□□□□ -0.93
CAPN3-203ENST00000349748 GAGE12BA1L429 117 aa9.25□□□□□ -0.93
CAPN3-203ENST00000349748 OR2T8A6NH00 312 aa9.25□□□□□ -0.93
CAPN3-203ENST00000349748 HIST1H1DP16402 221 aaKnown RBP9.25□□□□□ -0.93
CAPN3-203ENST00000349748 IGFBP4P22692 258 aa9.25□□□□□ -0.93
CAPN3-203ENST00000349748 DYNLT3P51808 116 aa9.25□□□□□ -0.93
CAPN3-203ENST00000349748 GFRA1P56159 465 aa9.25□□□□□ -0.93
CAPN3-203ENST00000349748 CSNK1G2P78368 415 aa9.25□□□□□ -0.93
CAPN3-203ENST00000349748 FAM53BQ14153 422 aa9.25□□□□□ -0.93
CAPN3-203ENST00000349748 TMEM95Q3KNT9 176 aa9.25□□□□□ -0.93
CAPN3-203ENST00000349748 AMMECR1LQ6DCA0 310 aa9.25□□□□□ -0.93
CAPN3-203ENST00000349748 LIPHQ8WWY8 451 aa9.25□□□□□ -0.93
CAPN3-203ENST00000349748 PLK3Q9H4B4 646 aa9.25□□□□□ -0.93
CAPN3-203ENST00000349748 VSIRQ9H7M9 311 aa9.25□□□□□ -0.93
CAPN3-203ENST00000349748 TP73-AS1Q9UF72 201 aa9.25□□□□□ -0.93
CAPN3-203ENST00000349748 VDAC3Q9Y277 283 aa9.25□□□□□ -0.93
CAPN3-203ENST00000349748 CRYM-AS1A6NIL9 109 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 P2RY10O00398 339 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 CYR61O00622 381 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 CSTAP01040 98 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 TYMSP04818 313 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 IL13RA2Q14627 380 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 RAB30Q15771 203 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 MSMO1Q15800 293 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 OR52L2PQ8NGH6 319 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 ZNF519Q8TB69 540 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 PELI2Q9HAT8 420 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 SLC35D1Q9NTN3 355 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 HHLA2Q9UM44 414 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 TMEM14AQ9Y6G1 99 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 PXMP4Q9Y6I8 212 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 IGKV1-8A0A0C4DH67 115 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 RNF212BA8MTL3 300 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 C5orf67F2Z3F1 127 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 K7ESM1 405 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 RAB29O14966 203 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 BCL6P41182 706 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 PIGPP57054 158 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 ELAVL3Q14576 367 aaKnown RBP9.24□□□□□ -0.93
CAPN3-203ENST00000349748 GNMTQ14749 295 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 FDX2Q6P4F2 183 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 ABHD17CQ6PCB6 329 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 CYP2G1PQ6ZSU1 146 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 PLPPR1Q8TBJ4 325 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 KLHDC3Q9BQ90 382 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 SCN3AQ9NY46 2000 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 IGLON5A6NGN9 336 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 PROB1E7EW31 1015 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 LINC01565O15544 149 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 PITX3O75364 302 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 NXPH3O95157 252 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 GLB1P16278 677 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 EPHA8P29322 1005 aaPredicted RBP9.24□□□□□ -0.93
CAPN3-203ENST00000349748 PAFAH1B2P68402 229 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 ALG10Q5BKT4 473 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 WBP2NLQ6ICG8 309 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 FIGLAQ6QHK4 219 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 ADIPOR1Q96A54 375 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 SLAMF6Q96DU3 332 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 SLC46A2Q9BY10 475 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 RPRMQ9NS64 109 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 RYDENQ9NUL5 291 aaKnown RBP9.24□□□□□ -0.93
CAPN3-203ENST00000349748 DNAJB12Q9NXW2 375 aaKnown RBP9.24□□□□□ -0.93
CAPN3-203ENST00000349748 ANAPC10Q9UM13 185 aa9.24□□□□□ -0.93
CAPN3-203ENST00000349748 ZNF732B4DXR9 585 aa9.23□□□□□ -0.93
CAPN3-203ENST00000349748 ZNF878C9JN71 531 aa9.23□□□□□ -0.93
CAPN3-203ENST00000349748 POU2F2P09086 479 aa9.23□□□□□ -0.93
CAPN3-203ENST00000349748 GABRA3P34903 492 aa9.23□□□□□ -0.93
CAPN3-203ENST00000349748 RPS4XP62701 263 aaKnown RBP9.23□□□□□ -0.93
CAPN3-203ENST00000349748 ZNF726P1Q15940 193 aa9.23□□□□□ -0.93
CAPN3-203ENST00000349748 TRIM61Q5EBN2 209 aa9.23□□□□□ -0.93
CAPN3-203ENST00000349748 SAMD13Q5VXD3 122 aa9.23□□□□□ -0.93
CAPN3-203ENST00000349748 LINC00114Q6XXX2 140 aa9.23□□□□□ -0.93
CAPN3-203ENST00000349748 TMEM25Q86YD3 366 aa9.23□□□□□ -0.93
CAPN3-203ENST00000349748 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.23□□□□□ -0.93
CAPN3-203ENST00000349748 ZNF547Q8IVP9 402 aa9.23□□□□□ -0.93
CAPN3-203ENST00000349748 SELENOHQ8IZQ5 122 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms