RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 TPRX1Q8N7U7 411 aa15.78■□□□□ 0.12
CHMP4A-201ENST00000347519 OR52I2Q8NH67 350 aa15.78■□□□□ 0.12
CHMP4A-201ENST00000347519 NEK7Q8TDX7 302 aa15.78■□□□□ 0.12
CHMP4A-201ENST00000347519 S100ZQ8WXG8 99 aa15.78■□□□□ 0.12
CHMP4A-201ENST00000347519 PIMREGQ9BSJ6 248 aa15.78■□□□□ 0.12
CHMP4A-201ENST00000347519 ETAA1Q9NY74 926 aa15.78■□□□□ 0.12
CHMP4A-201ENST00000347519 VPS13CQ709C8 3753 aa15.78■□□□□ 0.12
CHMP4A-201ENST00000347519 DSCAML1Q8TD84 2053 aa15.78■□□□□ 0.12
CHMP4A-201ENST00000347519 TRAV39A0A0B4J263 110 aa15.77■□□□□ 0.12
CHMP4A-201ENST00000347519 F5H0A9 414 aaPredicted RBP15.77■□□□□ 0.12
CHMP4A-201ENST00000347519 DVL1O14640 695 aa15.77■□□□□ 0.12
CHMP4A-201ENST00000347519 RPS2P15880 293 aaKnown RBP15.77■□□□□ 0.12
CHMP4A-201ENST00000347519 ZNF45Q02386 682 aa15.77■□□□□ 0.12
CHMP4A-201ENST00000347519 AESQ08117 197 aa15.77■□□□□ 0.12
CHMP4A-201ENST00000347519 ARFRP1Q13795 201 aa15.77■□□□□ 0.12
CHMP4A-201ENST00000347519 PNLIPRP3Q17RR3 467 aa15.77■□□□□ 0.12
CHMP4A-201ENST00000347519 RSBN1Q5VWQ0 802 aaPredicted RBP15.77■□□□□ 0.12
CHMP4A-201ENST00000347519 SHEQ5VZ18 495 aa15.77■□□□□ 0.12
CHMP4A-201ENST00000347519 SLC36A1Q7Z2H8 476 aa15.77■□□□□ 0.12
CHMP4A-201ENST00000347519 C5orf24Q7Z6I8 188 aa15.77■□□□□ 0.12
CHMP4A-201ENST00000347519 OR8H2Q8N162 312 aa15.77■□□□□ 0.12
CHMP4A-201ENST00000347519 CLDND2Q8NHS1 167 aa15.77■□□□□ 0.12
CHMP4A-201ENST00000347519 MED30Q96HR3 178 aa15.77■□□□□ 0.12
CHMP4A-201ENST00000347519 PATZ1Q9HBE1 687 aaKnown RBP15.77■□□□□ 0.12
CHMP4A-201ENST00000347519 IGHV4-61A0A0C4DH41 118 aa15.76■□□□□ 0.11
CHMP4A-201ENST00000347519 SERPINE3A8MV23 424 aa15.76■□□□□ 0.11
CHMP4A-201ENST00000347519 H3BUI4 141 aa15.76■□□□□ 0.11
CHMP4A-201ENST00000347519 NDUFS8O00217 210 aa15.76■□□□□ 0.11
CHMP4A-201ENST00000347519 CTDSPLO15194 276 aa15.76■□□□□ 0.11
CHMP4A-201ENST00000347519 LANCL1O43813 399 aa15.76■□□□□ 0.11
CHMP4A-201ENST00000347519 TPPPO94811 219 aa15.76■□□□□ 0.11
CHMP4A-201ENST00000347519 FCER2P06734 321 aa15.76■□□□□ 0.11
CHMP4A-201ENST00000347519 PTBP1P26599 531 aaKnown RBP eCLIP15.76■□□□□ 0.11
CHMP4A-201ENST00000347519 PRSS3P35030 304 aa15.76■□□□□ 0.11
CHMP4A-201ENST00000347519 GLIPR1P48060 266 aa15.76■□□□□ 0.11
CHMP4A-201ENST00000347519 RBM39Q14498 530 aaKnown RBP15.76■□□□□ 0.11
CHMP4A-201ENST00000347519 EDDM3AQ14507 147 aa15.76■□□□□ 0.11
CHMP4A-201ENST00000347519 ZNF846Q147U1 533 aa15.76■□□□□ 0.11
CHMP4A-201ENST00000347519 Q5PR19 223 aa15.76■□□□□ 0.11
CHMP4A-201ENST00000347519 ZNF497Q6ZNH5 498 aa15.76■□□□□ 0.11
CHMP4A-201ENST00000347519 SPICQ8N5J4 248 aa15.76■□□□□ 0.11
CHMP4A-201ENST00000347519 MRPL30Q8TCC3 161 aaKnown RBP15.76■□□□□ 0.11
CHMP4A-201ENST00000347519 GPX8Q8TED1 209 aa15.76■□□□□ 0.11
CHMP4A-201ENST00000347519 CMSS1Q9BQ75 279 aaKnown RBP15.76■□□□□ 0.11
CHMP4A-201ENST00000347519 DCTN5Q9BTE1 182 aa15.76■□□□□ 0.11
CHMP4A-201ENST00000347519 SLC25A10Q9UBX3 287 aaPredicted RBP15.76■□□□□ 0.11
CHMP4A-201ENST00000347519 ZNF230Q9UIE0 474 aaPredicted RBP15.76■□□□□ 0.11
CHMP4A-201ENST00000347519 MEX3AA1L020 520 aaKnown RBP15.75■□□□□ 0.11
CHMP4A-201ENST00000347519 MGST3O14880 152 aa15.75■□□□□ 0.11
CHMP4A-201ENST00000347519 CA11O75493 328 aa15.75■□□□□ 0.11
CHMP4A-201ENST00000347519 NAPSAO96009 420 aa15.75■□□□□ 0.11
CHMP4A-201ENST00000347519 IGHV2-5P01817 119 aa15.75■□□□□ 0.11
CHMP4A-201ENST00000347519 MT-ND4P03905 459 aa15.75■□□□□ 0.11
CHMP4A-201ENST00000347519 CD3GP09693 182 aa15.75■□□□□ 0.11
CHMP4A-201ENST00000347519 DSCR9P59020 149 aa15.75■□□□□ 0.11
CHMP4A-201ENST00000347519 GNG2P59768 71 aa15.75■□□□□ 0.11
CHMP4A-201ENST00000347519 LMO4P61968 165 aa15.75■□□□□ 0.11
CHMP4A-201ENST00000347519 PITPNAQ00169 270 aa15.75■□□□□ 0.11
CHMP4A-201ENST00000347519 BAK1Q16611 211 aa15.75■□□□□ 0.11
CHMP4A-201ENST00000347519 TRAPPC6BQ86SZ2 158 aa15.75■□□□□ 0.11
CHMP4A-201ENST00000347519 GAPTQ8N292 157 aa15.75■□□□□ 0.11
CHMP4A-201ENST00000347519 GVQW1Q8N7I0 195 aa15.75■□□□□ 0.11
CHMP4A-201ENST00000347519 OR4K15Q8NH41 348 aa15.75■□□□□ 0.11
CHMP4A-201ENST00000347519 MAFIPQ8WZ33 124 aa15.75■□□□□ 0.11
CHMP4A-201ENST00000347519 NEIL1Q96FI4 390 aaPredicted RBP15.75■□□□□ 0.11
CHMP4A-201ENST00000347519 FAM234AQ9H0X4 552 aa15.75■□□□□ 0.11
CHMP4A-201ENST00000347519 MIOXQ9UGB7 285 aa15.75■□□□□ 0.11
CHMP4A-201ENST00000347519 KIF25Q9UIL4 384 aa15.75■□□□□ 0.11
CHMP4A-201ENST00000347519 DOCK11Q5JSL3 2073 aa15.75■□□□□ 0.11
CHMP4A-201ENST00000347519 NDUFB3O43676 98 aa15.75■□□□□ 0.11
CHMP4A-201ENST00000347519 CSN2P05814 226 aa15.75■□□□□ 0.11
CHMP4A-201ENST00000347519 NDUFB7P17568 137 aa15.75■□□□□ 0.11
CHMP4A-201ENST00000347519 IL2RGP31785 369 aa15.75■□□□□ 0.11
CHMP4A-201ENST00000347519 ARL6IP1Q15041 203 aa15.75■□□□□ 0.11
CHMP4A-201ENST00000347519 KIAA2026Q5HYC2 2103 aa15.75■□□□□ 0.11
CHMP4A-201ENST00000347519 KRBOX4Q5JUW0 171 aa15.75■□□□□ 0.11
CHMP4A-201ENST00000347519 SLC35E4Q6ICL7 350 aa15.75■□□□□ 0.11
CHMP4A-201ENST00000347519 PPP1R35Q8TAP8 253 aa15.75■□□□□ 0.11
CHMP4A-201ENST00000347519 CCDC107Q8WV48 283 aa15.75■□□□□ 0.11
CHMP4A-201ENST00000347519 SMIM4Q8WVI0 70 aa15.75■□□□□ 0.11
CHMP4A-201ENST00000347519 WDR12Q9GZL7 423 aaKnown RBP15.75■□□□□ 0.11
CHMP4A-201ENST00000347519 RABL2AQ9UBK7 228 aaPredicted RBP15.75■□□□□ 0.11
CHMP4A-201ENST00000347519 KLK11Q9UBX7 282 aa15.75■□□□□ 0.11
CHMP4A-201ENST00000347519 PCDHB10Q9UN67 800 aa15.75■□□□□ 0.11
CHMP4A-201ENST00000347519 RABL2BQ9UNT1 228 aa15.75■□□□□ 0.11
CHMP4A-201ENST00000347519 ARHGAP32A7KAX9 2087 aa15.74■□□□□ 0.11
CHMP4A-201ENST00000347519 IGKV1D-8A0A087WSZ0 117 aa15.74■□□□□ 0.11
CHMP4A-201ENST00000347519 A0A096LNT2 108 aa15.74■□□□□ 0.11
CHMP4A-201ENST00000347519 GABARAPH6UMI1 98 aa15.74■□□□□ 0.11
CHMP4A-201ENST00000347519 GSTZ1O43708 216 aaPredicted RBP15.74■□□□□ 0.11
CHMP4A-201ENST00000347519 KCNJ3P48549 501 aa15.74■□□□□ 0.11
CHMP4A-201ENST00000347519 PPP5CP53041 499 aa15.74■□□□□ 0.11
CHMP4A-201ENST00000347519 WDR25Q64LD2 544 aaPredicted RBP15.74■□□□□ 0.11
CHMP4A-201ENST00000347519 Q8N402 240 aa15.74■□□□□ 0.11
CHMP4A-201ENST00000347519 OR8B3Q8NGG8 313 aa15.74■□□□□ 0.11
CHMP4A-201ENST00000347519 OR5D13Q8NGL4 314 aa15.74■□□□□ 0.11
CHMP4A-201ENST00000347519 OR8B2Q96RD0 313 aa15.74■□□□□ 0.11
CHMP4A-201ENST00000347519 CSMD1Q96PZ7 3565 aa15.74■□□□□ 0.11
CHMP4A-201ENST00000347519 AKAP9Q99996 3911 aa15.73■□□□□ 0.11
CHMP4A-201ENST00000347519 TMEM30CPA0ZSE6 113 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms