RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 UBE2QL1A1L167 161 aa7.87□□□□□ -1.15
ATG4A-202ENST00000345734 MFSD2BA6NFX1 497 aa7.87□□□□□ -1.15
ATG4A-202ENST00000345734 G3V3Q6 166 aa7.87□□□□□ -1.15
ATG4A-202ENST00000345734 CA11O75493 328 aa7.87□□□□□ -1.15
ATG4A-202ENST00000345734 IGHV2-70P01814 119 aa7.87□□□□□ -1.15
ATG4A-202ENST00000345734 RAB4AP20338 218 aa7.87□□□□□ -1.15
ATG4A-202ENST00000345734 UCP2P55851 309 aa7.87□□□□□ -1.15
ATG4A-202ENST00000345734 ARL6IP1Q15041 203 aa7.87□□□□□ -1.15
ATG4A-202ENST00000345734 KRTCAP3Q53RY4 240 aa7.87□□□□□ -1.15
ATG4A-202ENST00000345734 CT83Q5H943 113 aa7.87□□□□□ -1.15
ATG4A-202ENST00000345734 HAGHLQ6PII5 290 aaPredicted RBP7.87□□□□□ -1.15
ATG4A-202ENST00000345734 ZNF474Q6S9Z5 364 aaPredicted RBP7.87□□□□□ -1.15
ATG4A-202ENST00000345734 FBXW12Q6X9E4 464 aa7.87□□□□□ -1.15
ATG4A-202ENST00000345734 ADAD2Q8NCV1 583 aaKnown RBP7.87□□□□□ -1.15
ATG4A-202ENST00000345734 OR1J1Q8NGS3 322 aa7.87□□□□□ -1.15
ATG4A-202ENST00000345734 OR13G1Q8NGZ3 307 aa7.87□□□□□ -1.15
ATG4A-202ENST00000345734 FAM57AQ8TBR7 257 aa7.87□□□□□ -1.15
ATG4A-202ENST00000345734 MARCH1Q8TCQ1 289 aa7.87□□□□□ -1.15
ATG4A-202ENST00000345734 ZNF431Q8TF32 576 aaPredicted RBP7.87□□□□□ -1.15
ATG4A-202ENST00000345734 CCDC107Q8WV48 283 aa7.87□□□□□ -1.15
ATG4A-202ENST00000345734 MRPS24Q96EL2 167 aaKnown RBP7.87□□□□□ -1.15
ATG4A-202ENST00000345734 BOD1Q96IK1 185 aa7.87□□□□□ -1.15
ATG4A-202ENST00000345734 ZNF488Q96MN9 340 aa7.87□□□□□ -1.15
ATG4A-202ENST00000345734 ESRP2Q9H6T0 727 aaKnown RBP7.87□□□□□ -1.15
ATG4A-202ENST00000345734 MLXQ9UH92 298 aa7.87□□□□□ -1.15
ATG4A-202ENST00000345734 HSF4Q9ULV5 492 aa7.87□□□□□ -1.15
ATG4A-202ENST00000345734 DMRT1Q9Y5R6 373 aa7.87□□□□□ -1.15
ATG4A-202ENST00000345734 MPC1Q9Y5U8 109 aa7.87□□□□□ -1.15
ATG4A-202ENST00000345734 OR7C1O76099 320 aaPredicted RBP7.86□□□□□ -1.15
ATG4A-202ENST00000345734 GLAP06280 429 aa7.86□□□□□ -1.15
ATG4A-202ENST00000345734 CECR9P0C854 216 aa7.86□□□□□ -1.15
ATG4A-202ENST00000345734 OPRM1P35372 400 aa7.86□□□□□ -1.15
ATG4A-202ENST00000345734 MPV17P39210 176 aa7.86□□□□□ -1.15
ATG4A-202ENST00000345734 NPY4RP50391 375 aa7.86□□□□□ -1.15
ATG4A-202ENST00000345734 DHRS2Q13268 280 aa7.86□□□□□ -1.15
ATG4A-202ENST00000345734 PPA1Q15181 289 aa7.86□□□□□ -1.15
ATG4A-202ENST00000345734 ACTBL2Q562R1 376 aa7.86□□□□□ -1.15
ATG4A-202ENST00000345734 SLC25A42Q86VD7 318 aa7.86□□□□□ -1.15
ATG4A-202ENST00000345734 ZDHHC22Q8N966 263 aa7.86□□□□□ -1.15
ATG4A-202ENST00000345734 OR2AK2Q8NG84 335 aa7.86□□□□□ -1.15
ATG4A-202ENST00000345734 OR2T35Q8NGX2 323 aa7.86□□□□□ -1.15
ATG4A-202ENST00000345734 TERB2Q8NHR7 220 aa7.86□□□□□ -1.15
ATG4A-202ENST00000345734 CMSS1Q9BQ75 279 aaKnown RBP7.86□□□□□ -1.15
ATG4A-202ENST00000345734 PDCD10Q9BUL8 212 aa7.86□□□□□ -1.15
ATG4A-202ENST00000345734 RDH8Q9NYR8 311 aa7.86□□□□□ -1.15
ATG4A-202ENST00000345734 EHFQ9NZC4 300 aa7.86□□□□□ -1.15
ATG4A-202ENST00000345734 PURGQ9UJV8 347 aaKnown RBP7.86□□□□□ -1.15
ATG4A-202ENST00000345734 MGAT4AQ9UM21 535 aa7.86□□□□□ -1.15
ATG4A-202ENST00000345734 CHD8Q9HCK8 2581 aa7.86□□□□□ -1.15
ATG4A-202ENST00000345734 ICE1Q9Y2F5 2266 aa7.86□□□□□ -1.15
ATG4A-202ENST00000345734 GOSR2O14653 212 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 PDCD6O75340 191 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 GLI4P10075 376 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 ZNF35P13682 527 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 DNASE1P24855 282 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 TDGF1P3P51864 188 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 H2BFSP57053 126 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 PSG7Q13046 419 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 PPP1R1AQ13522 171 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 P2RY6Q15077 328 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 CHRFAM7AQ494W8 412 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 DCAF12L2Q5VW00 463 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 SAXO1Q8IYX7 474 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 ADGRG4Q8IZF6 3080 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 Q8NFD4 153 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 OR5AP2Q8NGF4 316 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 MISP3Q96FF7 219 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 MYOZ1Q9NP98 299 aaPredicted RBP7.85□□□□□ -1.15
ATG4A-202ENST00000345734 C19orf73Q9NVV2 129 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 FZR1Q9UM11 496 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 SPTA1P02549 2419 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 IGHV1-18A0A0C4DH31 117 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 IGHV3-64DA0A0J9YX35 117 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 OR5H1A6NKK0 313 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 OR5B21A6NL26 309 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 TRAPPC2LH3BP13 241 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 RRP8O43159 456 aaKnown RBP7.85□□□□□ -1.15
ATG4A-202ENST00000345734 RHBDL1O75783 438 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 SNAPC5O75971 98 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 IGLV1-44P01699 117 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 HLA-AP01891 365 aaKnown RBP7.85□□□□□ -1.15
ATG4A-202ENST00000345734 CRHP06850 196 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 FCGR3AP08637 254 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 AKR1C4P17516 323 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 FUT3P21217 361 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 ZBTB25P24278 435 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 DUSP1P28562 367 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 PTGER4P35408 488 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 TIMP3P35625 211 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 TAS2R46P59540 309 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 FGF12P61328 243 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 GNG3P63215 75 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 LBHQ53QV2 105 aaPredicted RBP7.85□□□□□ -1.15
ATG4A-202ENST00000345734 PRR30Q53SZ7 412 aaPredicted RBP7.85□□□□□ -1.15
ATG4A-202ENST00000345734 AADACL3Q5VUY0 350 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 Q6ZPA2 131 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 WDR86Q86TI4 376 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 TMEM200AQ86VY9 491 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 LHFPL1Q86WI0 220 aa7.85□□□□□ -1.15
ATG4A-202ENST00000345734 MKXQ8IYA7 352 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms