RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 IFT22Q9H7X7 185 aa11.44□□□□□ -0.58
CDC42-202ENST00000344548 TMEM165Q9HC07 324 aa11.44□□□□□ -0.58
CDC42-202ENST00000344548 DECR2Q9NUI1 292 aa11.44□□□□□ -0.58
CDC42-202ENST00000344548 NECAP2Q9NVZ3 263 aa11.44□□□□□ -0.58
CDC42-202ENST00000344548 TREM2Q9NZC2 230 aa11.44□□□□□ -0.58
CDC42-202ENST00000344548 MGAT4AQ9UM21 535 aa11.44□□□□□ -0.58
CDC42-202ENST00000344548 SPEF1Q9Y4P9 236 aa11.44□□□□□ -0.58
CDC42-202ENST00000344548 PRSS44E7EML9 344 aa11.43□□□□□ -0.58
CDC42-202ENST00000344548 SLC9A3R2Q15599 337 aa11.43□□□□□ -0.58
CDC42-202ENST00000344548 ACP7Q6ZNF0 438 aa11.43□□□□□ -0.58
CDC42-202ENST00000344548 LINC00596Q86U02 117 aa11.43□□□□□ -0.58
CDC42-202ENST00000344548 TMEM17Q86X19 198 aa11.43□□□□□ -0.58
CDC42-202ENST00000344548 TMEM185AQ8NFB2 350 aa11.43□□□□□ -0.58
CDC42-202ENST00000344548 LINC01560Q8TB33 94 aa11.43□□□□□ -0.58
CDC42-202ENST00000344548 FXYD6Q9H0Q3 95 aa11.43□□□□□ -0.58
CDC42-202ENST00000344548 CFAP46Q8IYW2 2715 aa11.43□□□□□ -0.58
CDC42-202ENST00000344548 MEX3AA1L020 520 aaKnown RBP11.43□□□□□ -0.58
CDC42-202ENST00000344548 HAND1O96004 215 aa11.43□□□□□ -0.58
CDC42-202ENST00000344548 ACAA1P09110 424 aaPredicted RBP11.43□□□□□ -0.58
CDC42-202ENST00000344548 PTAFRP25105 342 aa11.43□□□□□ -0.58
CDC42-202ENST00000344548 ERP29P30040 261 aaKnown RBP11.43□□□□□ -0.58
CDC42-202ENST00000344548 ADIPOQQ15848 244 aa11.43□□□□□ -0.58
CDC42-202ENST00000344548 PAN3Q58A45 887 aaKnown RBP11.43□□□□□ -0.58
CDC42-202ENST00000344548 CLEC18BQ6UXF7 455 aa11.43□□□□□ -0.58
CDC42-202ENST00000344548 LDLRAD3Q86YD5 345 aa11.43□□□□□ -0.58
CDC42-202ENST00000344548 Q8IYB0 196 aa11.43□□□□□ -0.58
CDC42-202ENST00000344548 C9orf62Q8N4C0 152 aa11.43□□□□□ -0.58
CDC42-202ENST00000344548 LRRC29Q8WV35 223 aa11.43□□□□□ -0.58
CDC42-202ENST00000344548 MITD1Q8WV92 249 aa11.43□□□□□ -0.58
CDC42-202ENST00000344548 ITLN1Q8WWA0 313 aa11.43□□□□□ -0.58
CDC42-202ENST00000344548 TOMM40LQ969M1 308 aa11.43□□□□□ -0.58
CDC42-202ENST00000344548 MRPL24Q96A35 216 aaKnown RBP11.43□□□□□ -0.58
CDC42-202ENST00000344548 OPN4Q9UHM6 478 aa11.43□□□□□ -0.58
CDC42-202ENST00000344548 RFPL4AA6NLU0 287 aa11.42□□□□□ -0.58
CDC42-202ENST00000344548 RFPL4AL1F8VTS6 287 aa11.42□□□□□ -0.58
CDC42-202ENST00000344548 BET1O15155 118 aa11.42□□□□□ -0.58
CDC42-202ENST00000344548 AADACP22760 399 aa11.42□□□□□ -0.58
CDC42-202ENST00000344548 DNASE1P24855 282 aa11.42□□□□□ -0.58
CDC42-202ENST00000344548 CD34P28906 385 aa11.42□□□□□ -0.58
CDC42-202ENST00000344548 CD200P41217 278 aa11.42□□□□□ -0.58
CDC42-202ENST00000344548 ANKRD55Q3KP44 614 aa11.42□□□□□ -0.58
CDC42-202ENST00000344548 TMEM128Q5BJH2 165 aa11.42□□□□□ -0.58
CDC42-202ENST00000344548 KCTD9Q7L273 389 aa11.42□□□□□ -0.58
CDC42-202ENST00000344548 MOGAT3Q86VF5 341 aa11.42□□□□□ -0.58
CDC42-202ENST00000344548 DMRTC2Q8IXT2 367 aaPredicted RBP11.42□□□□□ -0.58
CDC42-202ENST00000344548 GCSAMQ8N6F7 178 aa11.42□□□□□ -0.58
CDC42-202ENST00000344548 SPERTQ8NA61 448 aa11.42□□□□□ -0.58
CDC42-202ENST00000344548 NUP37Q8NFH4 326 aa11.42□□□□□ -0.58
CDC42-202ENST00000344548 MEGF10Q96KG7 1140 aa11.42□□□□□ -0.58
CDC42-202ENST00000344548 DCAF16Q9NXF7 216 aa11.42□□□□□ -0.58
CDC42-202ENST00000344548 MPTX1A8MV57 137 aa11.42□□□□□ -0.58
CDC42-202ENST00000344548 IGHV1-46P01743 117 aa11.42□□□□□ -0.58
CDC42-202ENST00000344548 PGAM2P15259 253 aa11.42□□□□□ -0.58
CDC42-202ENST00000344548 PPP3CBP16298 524 aa11.42□□□□□ -0.58
CDC42-202ENST00000344548 CASP6P55212 293 aa11.42□□□□□ -0.58
CDC42-202ENST00000344548 SEC61A1P61619 476 aaKnown RBP11.42□□□□□ -0.58
CDC42-202ENST00000344548 FAM53AQ6NSI3 398 aaPredicted RBP11.42□□□□□ -0.58
CDC42-202ENST00000344548 CD177Q8N6Q3 437 aa11.42□□□□□ -0.58
CDC42-202ENST00000344548 BOLLQ8N9W6 283 aaKnown RBP11.42□□□□□ -0.58
CDC42-202ENST00000344548 OR11L1Q8NGX0 322 aa11.42□□□□□ -0.58
CDC42-202ENST00000344548 ZFAND1Q8TCF1 268 aa11.42□□□□□ -0.58
CDC42-202ENST00000344548 SEC22AQ96IW7 307 aa11.42□□□□□ -0.58
CDC42-202ENST00000344548 GPHA2Q96T91 129 aa11.42□□□□□ -0.58
CDC42-202ENST00000344548 RHOFQ9HBH0 211 aa11.42□□□□□ -0.58
CDC42-202ENST00000344548 SPACA1Q9HBV2 294 aa11.42□□□□□ -0.58
CDC42-202ENST00000344548 LRBAP50851 2863 aa11.42□□□□□ -0.58
CDC42-202ENST00000344548 IGSF10Q6WRI0 2623 aa11.41□□□□□ -0.58
CDC42-202ENST00000344548 ARID1AO14497 2285 aa11.41□□□□□ -0.58
CDC42-202ENST00000344548 ABCA4P78363 2273 aa11.41□□□□□ -0.58
CDC42-202ENST00000344548 IGHV3OR15-7A0A075B7D8 119 aa11.41□□□□□ -0.58
CDC42-202ENST00000344548 PLSCR5A0PG75 271 aa11.41□□□□□ -0.58
CDC42-202ENST00000344548 SIAH2O43255 324 aa11.41□□□□□ -0.58
CDC42-202ENST00000344548 DUS4LO95620 317 aaKnown RBP11.41□□□□□ -0.58
CDC42-202ENST00000344548 PLAUP00749 431 aa11.41□□□□□ -0.58
CDC42-202ENST00000344548 GIPP09681 153 aaPredicted RBP11.41□□□□□ -0.58
CDC42-202ENST00000344548 OR4A8P0C604 315 aa11.41□□□□□ -0.58
CDC42-202ENST00000344548 ZNF81P51508 661 aa11.41□□□□□ -0.58
CDC42-202ENST00000344548 ZNF880Q6PDB4 577 aa11.41□□□□□ -0.58
CDC42-202ENST00000344548 Q6ZS49 121 aa11.41□□□□□ -0.58
CDC42-202ENST00000344548 TPRX1Q8N7U7 411 aa11.41□□□□□ -0.58
CDC42-202ENST00000344548 FAM122AQ96E09 287 aa11.41□□□□□ -0.58
CDC42-202ENST00000344548 HYLS1Q96M11 299 aa11.41□□□□□ -0.58
CDC42-202ENST00000344548 TMEM246Q9BRR3 403 aa11.41□□□□□ -0.58
CDC42-202ENST00000344548 HSPB11Q9Y547 144 aa11.41□□□□□ -0.58
CDC42-202ENST00000344548 ATP23Q9Y6H3 246 aa11.41□□□□□ -0.58
CDC42-202ENST00000344548 SPTBN1Q01082 2364 aaKnown RBP11.41□□□□□ -0.58
CDC42-202ENST00000344548 ANKHD1Q8IWZ3 2542 aaKnown RBP11.41□□□□□ -0.58
CDC42-202ENST00000344548 IGKV1D-13A0A0B4J2D9 117 aa11.4□□□□□ -0.58
CDC42-202ENST00000344548 TRDCB7Z8K6 153 aa11.4□□□□□ -0.58
CDC42-202ENST00000344548 SH2D1BO14796 132 aa11.4□□□□□ -0.58
CDC42-202ENST00000344548 ADAP1O75689 374 aa11.4□□□□□ -0.58
CDC42-202ENST00000344548 IGKV1-13P0DP09 117 aa11.4□□□□□ -0.58
CDC42-202ENST00000344548 ASCL1P50553 236 aa11.4□□□□□ -0.58
CDC42-202ENST00000344548 LGALSLQ3ZCW2 172 aaPredicted RBP11.4□□□□□ -0.58
CDC42-202ENST00000344548 FAHD2BQ6P2I3 314 aaPredicted RBP11.4□□□□□ -0.58
CDC42-202ENST00000344548 C11orf88Q6PI97 169 aa11.4□□□□□ -0.58
CDC42-202ENST00000344548 ZNF497Q6ZNH5 498 aa11.4□□□□□ -0.58
CDC42-202ENST00000344548 FAM219AQ8IW50 185 aa11.4□□□□□ -0.58
CDC42-202ENST00000344548 FAHD2AQ96GK7 314 aa11.4□□□□□ -0.58
CDC42-202ENST00000344548 DBX1A6NMT0 343 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms