RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 COX7A2P2O60397 106 aa11.06□□□□□ -0.64
LIN54-201ENST00000340417 TCRBP04435 133 aa11.06□□□□□ -0.64
LIN54-201ENST00000340417 HTR1DP28221 377 aa11.06□□□□□ -0.64
LIN54-201ENST00000340417 MPPED2Q15777 294 aa11.06□□□□□ -0.64
LIN54-201ENST00000340417 SLC25A53Q5H9E4 307 aa11.06□□□□□ -0.64
LIN54-201ENST00000340417 ST8SIA2Q92186 375 aa11.06□□□□□ -0.64
LIN54-201ENST00000340417 MEGF10Q96KG7 1140 aa11.06□□□□□ -0.64
LIN54-201ENST00000340417 WDR13Q9H1Z4 485 aa11.06□□□□□ -0.64
LIN54-201ENST00000340417 RASL12Q9NYN1 266 aa11.06□□□□□ -0.64
LIN54-201ENST00000340417 LHFPL6Q9Y693 200 aa11.06□□□□□ -0.64
LIN54-201ENST00000340417 TTRP02766 147 aa11.06□□□□□ -0.64
LIN54-201ENST00000340417 OR10J4P0C629 311 aa11.06□□□□□ -0.64
LIN54-201ENST00000340417 CLEC12BQ2HXU8 276 aa11.06□□□□□ -0.64
LIN54-201ENST00000340417 SLC16A12Q6ZSM3 486 aa11.06□□□□□ -0.64
LIN54-201ENST00000340417 RFPL4BQ6ZWI9 263 aa11.06□□□□□ -0.64
LIN54-201ENST00000340417 RHOUQ7L0Q8 258 aa11.06□□□□□ -0.64
LIN54-201ENST00000340417 PSENENQ9NZ42 101 aa11.06□□□□□ -0.64
LIN54-201ENST00000340417 ZNF705EA8MWA4 302 aaPredicted RBP11.06□□□□□ -0.64
LIN54-201ENST00000340417 FBXO24O75426 580 aa11.06□□□□□ -0.64
LIN54-201ENST00000340417 RRASP10301 218 aa11.06□□□□□ -0.64
LIN54-201ENST00000340417 ZNF266Q14584 549 aa11.06□□□□□ -0.64
LIN54-201ENST00000340417 ZNF674Q2M3X9 581 aa11.06□□□□□ -0.64
LIN54-201ENST00000340417 HARBI1Q96MB7 349 aa11.06□□□□□ -0.64
LIN54-201ENST00000340417 CEP250Q9BV73 2442 aa11.06□□□□□ -0.64
LIN54-201ENST00000340417 SULT1A3P0DMM9 295 aa11.05□□□□□ -0.64
LIN54-201ENST00000340417 SULT1A4P0DMN0 295 aa11.05□□□□□ -0.64
LIN54-201ENST00000340417 DTX1Q86Y01 620 aa11.05□□□□□ -0.64
LIN54-201ENST00000340417 IGLV1-36A0A0B4J1U3 117 aa11.05□□□□□ -0.64
LIN54-201ENST00000340417 ATF4P18848 351 aaPredicted RBP11.05□□□□□ -0.64
LIN54-201ENST00000340417 PTBP1P26599 531 aaKnown RBP eCLIP11.05□□□□□ -0.645e-10■■■■■ 66.8
LIN54-201ENST00000340417 EGR4Q05215 589 aa11.05□□□□□ -0.64
LIN54-201ENST00000340417 GCSAMQ8N6F7 178 aa11.05□□□□□ -0.64
LIN54-201ENST00000340417 ANKRD36A6QL64 1941 aa11.05□□□□□ -0.64
LIN54-201ENST00000340417 TDGF1P13385 188 aa11.05□□□□□ -0.64
LIN54-201ENST00000340417 MPV17P39210 176 aa11.05□□□□□ -0.64
LIN54-201ENST00000340417 ADAT3Q96EY9 351 aaPredicted RBP11.05□□□□□ -0.64
LIN54-201ENST00000340417 NDFIP1Q9BT67 221 aa11.05□□□□□ -0.64
LIN54-201ENST00000340417 TIMM9Q9Y5J7 89 aa11.05□□□□□ -0.64
LIN54-201ENST00000340417 DCTDP32321 178 aa11.05□□□□□ -0.64
LIN54-201ENST00000340417 TAGLNQ01995 201 aaKnown RBP11.05□□□□□ -0.64
LIN54-201ENST00000340417 HYLS1Q96M11 299 aa11.05□□□□□ -0.64
LIN54-201ENST00000340417 C17orf100A8MU93 164 aa11.05□□□□□ -0.64
LIN54-201ENST00000340417 IGHMP01871 453 aa11.05□□□□□ -0.64
LIN54-201ENST00000340417 LIMS1P48059 325 aa11.05□□□□□ -0.64
LIN54-201ENST00000340417 ABLIM2Q6H8Q1 611 aa11.05□□□□□ -0.64
LIN54-201ENST00000340417 PCSK4Q6UW60 755 aa11.05□□□□□ -0.64
LIN54-201ENST00000340417 WDR31Q8NA23 367 aa11.05□□□□□ -0.64
LIN54-201ENST00000340417 MRPL24Q96A35 216 aaKnown RBP11.05□□□□□ -0.64
LIN54-201ENST00000340417 MARS2Q96GW9 593 aaKnown RBP11.05□□□□□ -0.64
LIN54-201ENST00000340417 KLHDC2Q9Y2U9 406 aa11.05□□□□□ -0.64
LIN54-201ENST00000340417 KIAA1671Q9BY89 1806 aa11.04□□□□□ -0.64
LIN54-201ENST00000340417 AUNIPQ9H7T9 357 aa11.04□□□□□ -0.64
LIN54-201ENST00000340417 ZFHX2Q9C0A1 2572 aaPredicted RBP11.04□□□□□ -0.64
LIN54-201ENST00000340417 ELLP55199 621 aaPredicted RBP11.04□□□□□ -0.64
LIN54-201ENST00000340417 TAS2R45P59539 299 aa11.04□□□□□ -0.64
LIN54-201ENST00000340417 ZNF385CQ66K41 422 aaPredicted RBP11.04□□□□□ -0.64
LIN54-201ENST00000340417 NCR3LG1Q68D85 454 aa11.04□□□□□ -0.64
LIN54-201ENST00000340417 LRRTM1Q86UE6 522 aa11.04□□□□□ -0.64
LIN54-201ENST00000340417 TMEM104Q8NE00 496 aa11.04□□□□□ -0.64
LIN54-201ENST00000340417 AK3Q9UIJ7 227 aa11.04□□□□□ -0.64
LIN54-201ENST00000340417 TTC28Q96AY4 2481 aa11.04□□□□□ -0.64
LIN54-201ENST00000340417 CCSO14618 274 aa11.04□□□□□ -0.64
LIN54-201ENST00000340417 SCAF4O95104 1147 aaKnown RBP11.04□□□□□ -0.64
LIN54-201ENST00000340417 ERVS71-1P61550 626 aa11.04□□□□□ -0.64
LIN54-201ENST00000340417 FAAP20Q6NZ36 180 aa11.04□□□□□ -0.64
LIN54-201ENST00000340417 ZNF561Q8N587 486 aa11.04□□□□□ -0.64
LIN54-201ENST00000340417 NUP37Q8NFH4 326 aa11.04□□□□□ -0.64
LIN54-201ENST00000340417 RPS4Y2Q8TD47 263 aa11.04□□□□□ -0.64
LIN54-201ENST00000340417 ARV1Q9H2C2 271 aa11.04□□□□□ -0.64
LIN54-201ENST00000340417 CLEC18AA5D8T8 446 aa11.04□□□□□ -0.64
LIN54-201ENST00000340417 OR4C45A6NMZ5 311 aa11.04□□□□□ -0.64
LIN54-201ENST00000340417 CEBPDP49716 269 aaPredicted RBP11.04□□□□□ -0.64
LIN54-201ENST00000340417 HLA-DRB3P79483 266 aa11.04□□□□□ -0.64
LIN54-201ENST00000340417 DHRS7BQ6IAN0 325 aaPredicted RBP11.04□□□□□ -0.64
LIN54-201ENST00000340417 CLEC18CQ8NCF0 446 aa11.04□□□□□ -0.64
LIN54-201ENST00000340417 IGHV3-72A0A0B4J1Y9 119 aa11.03□□□□□ -0.64
LIN54-201ENST00000340417 IL5P05113 134 aa11.03□□□□□ -0.64
LIN54-201ENST00000340417 INSL4Q14641 139 aa11.03□□□□□ -0.64
LIN54-201ENST00000340417 PNKDQ8N490 385 aa11.03□□□□□ -0.64
LIN54-201ENST00000340417 TMEM147Q9BVK8 224 aa11.03□□□□□ -0.64
LIN54-201ENST00000340417 OGG1O15527 345 aa11.03□□□□□ -0.64
LIN54-201ENST00000340417 WISP1O95388 367 aa11.03□□□□□ -0.64
LIN54-201ENST00000340417 IL13RA2Q14627 380 aa11.03□□□□□ -0.64
LIN54-201ENST00000340417 ARRDC1Q8N5I2 433 aa11.03□□□□□ -0.64
LIN54-201ENST00000340417 TMEM229BQ8NBD8 167 aa11.03□□□□□ -0.64
LIN54-201ENST00000340417 OR13C8Q8NGS7 320 aa11.03□□□□□ -0.64
LIN54-201ENST00000340417 ABHD14AQ9BUJ0 271 aa11.03□□□□□ -0.64
LIN54-201ENST00000340417 GHITMQ9H3K2 345 aa11.03□□□□□ -0.64
LIN54-201ENST00000340417 ATPIF1Q9UII2 106 aa11.03□□□□□ -0.64
LIN54-201ENST00000340417 POMT1Q9Y6A1 747 aa11.03□□□□□ -0.64
LIN54-201ENST00000340417 IGLV3-32A0A0A0MS00 114 aa11.03□□□□□ -0.64
LIN54-201ENST00000340417 A0A0B4J2A0 478 aa11.03□□□□□ -0.64
LIN54-201ENST00000340417 DCTN6O00399 190 aa11.03□□□□□ -0.64
LIN54-201ENST00000340417 TBX6O95947 436 aaPredicted RBP11.03□□□□□ -0.64
LIN54-201ENST00000340417 SSBP1Q04837 148 aaKnown RBP11.03□□□□□ -0.64
LIN54-201ENST00000340417 ELP2Q6IA86 826 aa11.03□□□□□ -0.64
LIN54-201ENST00000340417 TERB2Q8NHR7 220 aa11.03□□□□□ -0.64
LIN54-201ENST00000340417 TPPP3Q9BW30 176 aa11.03□□□□□ -0.64
LIN54-201ENST00000340417 MAGT1Q9H0U3 335 aa11.03□□□□□ -0.64
LIN54-201ENST00000340417 CRIM1Q9NZV1 1036 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms