RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 TBL1XO60907 577 aa8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 MPIG6BO95866 241 aa8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 DBIP07108 87 aaKnown RBP8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 CT45A8P0DMV1 189 aa8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 CT45A9P0DMV2 189 aa8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 SLC6A8P48029 635 aa8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 EMP2P54851 167 aa8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 CT45A2Q5DJT8 189 aa8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 ASTLQ6HA08 431 aaPredicted RBP8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 LGI3Q8N145 548 aa8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 C5orf17Q8NAS9 161 aa8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 ATP6V0BQ99437 205 aa8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 RSG1Q9BU20 258 aa8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 ZDHHC11Q9H8X9 412 aa8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 B4GALT6Q9UBX8 382 aa8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 ENTPD2Q9Y5L3 495 aa8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 NUP210Q8TEM1 1887 aaPredicted RBP8.38□□□□□ -1.07
PTCHD4-201ENST00000339488 IGKV1D-8A0A087WSZ0 117 aa8.38□□□□□ -1.07
PTCHD4-201ENST00000339488 MUC21A0A0G2JKD1 596 aa8.38□□□□□ -1.07
PTCHD4-201ENST00000339488 MUC21A0A140T8X8 626 aa8.38□□□□□ -1.07
PTCHD4-201ENST00000339488 H3BP45 60 aa8.38□□□□□ -1.07
PTCHD4-201ENST00000339488 MSTNO14793 375 aa8.38□□□□□ -1.07
PTCHD4-201ENST00000339488 SEMA4FO95754 770 aa8.38□□□□□ -1.07
PTCHD4-201ENST00000339488 HPNP05981 417 aa8.38□□□□□ -1.07
PTCHD4-201ENST00000339488 CELA3BP08861 270 aa8.38□□□□□ -1.07
PTCHD4-201ENST00000339488 BCL6P41182 706 aa8.38□□□□□ -1.07
PTCHD4-201ENST00000339488 CCR2P41597 374 aa8.38□□□□□ -1.07
PTCHD4-201ENST00000339488 DYNLT3P51808 116 aa8.38□□□□□ -1.07
PTCHD4-201ENST00000339488 PHLDA2Q53GA4 152 aa8.38□□□□□ -1.07
PTCHD4-201ENST00000339488 TMEM177Q53S58 311 aa8.38□□□□□ -1.07
PTCHD4-201ENST00000339488 MUC21Q5SSG8 566 aa8.38□□□□□ -1.07
PTCHD4-201ENST00000339488 CDC20BQ86Y33 519 aa8.38□□□□□ -1.07
PTCHD4-201ENST00000339488 CISD2Q8N5K1 135 aaKnown RBP8.38□□□□□ -1.07
PTCHD4-201ENST00000339488 FAM216AQ8WUB2 273 aa8.38□□□□□ -1.07
PTCHD4-201ENST00000339488 GATAD1Q8WUU5 269 aa8.38□□□□□ -1.07
PTCHD4-201ENST00000339488 TBL2Q9Y4P3 447 aaKnown RBP8.38□□□□□ -1.07
PTCHD4-201ENST00000339488 TCF20Q9UGU0 1960 aaKnown RBP8.38□□□□□ -1.07
PTCHD4-201ENST00000339488 PGPEP1LA6NFU8 196 aa8.38□□□□□ -1.07
PTCHD4-201ENST00000339488 VSTM5A8MXK1 200 aa8.38□□□□□ -1.07
PTCHD4-201ENST00000339488 SSSCA1O60232 199 aa8.38□□□□□ -1.07
PTCHD4-201ENST00000339488 ZNF154Q13106 437 aa8.38□□□□□ -1.07
PTCHD4-201ENST00000339488 C9orf40Q8IXQ3 194 aa8.38□□□□□ -1.07
PTCHD4-201ENST00000339488 OR2Y1Q8NGV0 311 aa8.38□□□□□ -1.07
PTCHD4-201ENST00000339488 CPT1CQ8TCG5 803 aa8.38□□□□□ -1.07
PTCHD4-201ENST00000339488 ALG14Q96F25 216 aa8.38□□□□□ -1.07
PTCHD4-201ENST00000339488 NAT8Q9UHE5 227 aa8.38□□□□□ -1.07
PTCHD4-201ENST00000339488 MMP17Q9ULZ9 603 aa8.38□□□□□ -1.07
PTCHD4-201ENST00000339488 ANAPC1Q9H1A4 1944 aa8.37□□□□□ -1.07
PTCHD4-201ENST00000339488 FIGNL2A6NMB9 653 aa8.37□□□□□ -1.07
PTCHD4-201ENST00000339488 G3V4G9 280 aa8.37□□□□□ -1.07
PTCHD4-201ENST00000339488 SELPP16109 830 aa8.37□□□□□ -1.07
PTCHD4-201ENST00000339488 OTX2P32243 289 aa8.37□□□□□ -1.07
PTCHD4-201ENST00000339488 OR1D2P34982 312 aa8.37□□□□□ -1.07
PTCHD4-201ENST00000339488 EMDP50402 254 aa8.37□□□□□ -1.07
PTCHD4-201ENST00000339488 SELENOVP59797 346 aa8.37□□□□□ -1.07
PTCHD4-201ENST00000339488 SRPXP78539 464 aa8.37□□□□□ -1.07
PTCHD4-201ENST00000339488 NOGQ13253 232 aa8.37□□□□□ -1.07
PTCHD4-201ENST00000339488 IL13RA2Q14627 380 aa8.37□□□□□ -1.07
PTCHD4-201ENST00000339488 ZNF726P1Q15940 193 aa8.37□□□□□ -1.07
PTCHD4-201ENST00000339488 PRAMEF5Q5TYX0 476 aa8.37□□□□□ -1.07
PTCHD4-201ENST00000339488 PRAMEF6Q5VXH4 476 aa8.37□□□□□ -1.07
PTCHD4-201ENST00000339488 ZNF765Q7L2R6 523 aa8.37□□□□□ -1.07
PTCHD4-201ENST00000339488 HSD11B1LQ7Z5J1 315 aa8.37□□□□□ -1.07
PTCHD4-201ENST00000339488 SULF2Q8IWU5 870 aa8.37□□□□□ -1.07
PTCHD4-201ENST00000339488 FAM19A2Q8N3H0 131 aa8.37□□□□□ -1.07
PTCHD4-201ENST00000339488 STPG3Q8N7X2 389 aa8.37□□□□□ -1.07
PTCHD4-201ENST00000339488 PLD4Q96BZ4 506 aa8.37□□□□□ -1.07
PTCHD4-201ENST00000339488 RBMXL1Q96E39 390 aaKnown RBP8.37□□□□□ -1.07
PTCHD4-201ENST00000339488 ARHGAP5-AS1Q96IT6 56 aa8.37□□□□□ -1.07
PTCHD4-201ENST00000339488 ALG1L2C9J202 215 aa8.37□□□□□ -1.07
PTCHD4-201ENST00000339488 MT-CO2P00403 227 aa8.37□□□□□ -1.07
PTCHD4-201ENST00000339488 GATA2P23769 480 aaPredicted RBP8.37□□□□□ -1.07
PTCHD4-201ENST00000339488 SPINT3P49223 89 aa8.37□□□□□ -1.07
PTCHD4-201ENST00000339488 SNU13P55769 128 aaKnown RBP8.37□□□□□ -1.07
PTCHD4-201ENST00000339488 FOXL2P58012 376 aa8.37□□□□□ -1.07
PTCHD4-201ENST00000339488 FXYD4P59646 89 aa8.37□□□□□ -1.07
PTCHD4-201ENST00000339488 PAFAH1B2P68402 229 aa8.37□□□□□ -1.07
PTCHD4-201ENST00000339488 CSNK1G2P78368 415 aa8.37□□□□□ -1.07
PTCHD4-201ENST00000339488 CEACAM21Q3KPI0 293 aa8.37□□□□□ -1.07
PTCHD4-201ENST00000339488 SIGLECL1Q8N7X8 197 aa8.37□□□□□ -1.07
PTCHD4-201ENST00000339488 OR4F17Q8NGA8 305 aa8.37□□□□□ -1.07
PTCHD4-201ENST00000339488 OR4F4Q96R69 305 aa8.37□□□□□ -1.07
PTCHD4-201ENST00000339488 SDF2Q99470 211 aa8.37□□□□□ -1.07
PTCHD4-201ENST00000339488 MTHFD2LQ9H903 347 aaPredicted RBP8.37□□□□□ -1.07
PTCHD4-201ENST00000339488 SS18L2Q9UHA2 77 aa8.37□□□□□ -1.07
PTCHD4-201ENST00000339488 COLQQ9Y215 455 aaPredicted RBP8.37□□□□□ -1.07
PTCHD4-201ENST00000339488 PXMP4Q9Y6I8 212 aa8.37□□□□□ -1.07
PTCHD4-201ENST00000339488 DNAJC25-GNG10A0A024R161 153 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 IGHV2-26A0A0B4J1V2 119 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 GATA3P23771 443 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 SFTPDP35247 375 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 TM4SF4P48230 202 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 CSNK1A1P48729 337 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 LHX2P50458 406 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 RAC3P60763 192 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 CKS1BP61024 79 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 ACKR1Q16570 336 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 FAM110CQ1W6H9 321 aa8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 SP5Q6BEB4 398 aaPredicted RBP8.36□□□□□ -1.07
PTCHD4-201ENST00000339488 ZNF841Q6ZN19 808 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms