RNA–Protein interactions for RNA: ENST00000338585.6

MCF2-201, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,826 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-201ENST00000338585 LINC00596Q86U02 117 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 ADAD2Q8NCV1 583 aaKnown RBP3.48□□□□□ -1.85
MCF2-201ENST00000338585 OR6F1Q8NGZ6 308 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 UBALD1Q8TB05 177 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 MRPL30Q8TCC3 161 aaKnown RBP3.48□□□□□ -1.85
MCF2-201ENST00000338585 ST6GAL2Q96JF0 529 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 DMRTB1Q96MA1 342 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 FYTTD1Q96QD9 318 aaKnown RBP3.48□□□□□ -1.85
MCF2-201ENST00000338585 PRRT1Q99946 306 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 OR51J1Q9H342 316 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 IFT22Q9H7X7 185 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 RANGRFQ9HD47 186 aaPredicted RBP3.48□□□□□ -1.85
MCF2-201ENST00000338585 Q9N2K0 584 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 GCM1Q9NP62 436 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 SCP2D1Q9UJQ7 156 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 RNF115Q9Y4L5 304 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 ARFGEF3Q5TH69 2177 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 IGKV1D-17A0A075B6S4 117 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 OR5H14A6NHG9 310 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 C17orf100A8MU93 164 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 SRRM5B3KS81 715 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 PRSS44E7EML9 344 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 M0R233 179 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 SH2D1BO14796 132 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 CYB5R3P00387 301 aaPredicted RBP3.48□□□□□ -1.85
MCF2-201ENST00000338585 SCTP09683 121 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 RNF224P0DH78 156 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 OR5H8P0DN80 308 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 SELLP14151 372 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 CXCL3P19876 107 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 MECP2P51608 486 aaKnown RBP3.48□□□□□ -1.85
MCF2-201ENST00000338585 TAS2R46P59540 309 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 MZT1Q08AG7 82 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 HERPUD1Q15011 391 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 ACTBL2Q562R1 376 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 SPIN3Q5JUX0 258 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 GLDNQ6ZMI3 551 aaPredicted RBP3.48□□□□□ -1.85
MCF2-201ENST00000338585 ARRDC1Q8N5I2 433 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 CD177Q8N6Q3 437 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 TPRX1Q8N7U7 411 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 OR11H7Q8NGC8 314 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 TERB2Q8NHR7 220 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 CCDC107Q8WV48 283 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 LRRC46Q96FV0 321 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 SLC25A21Q9BQT8 299 aaPredicted RBP3.48□□□□□ -1.85
MCF2-201ENST00000338585 RHOFQ9HBH0 211 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 ZNF286AQ9HBT8 521 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 SPACA1Q9HBV2 294 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 TMEM165Q9HC07 324 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 CISD1Q9NZ45 108 aaKnown RBP3.48□□□□□ -1.85
MCF2-201ENST00000338585 ZNF69Q9UC07 566 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 IL19Q9UHD0 177 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 ZDHHC8Q9ULC8 765 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 EDARQ9UNE0 448 aa3.48□□□□□ -1.85
MCF2-201ENST00000338585 KIAA2026Q5HYC2 2103 aa3.47□□□□□ -1.85
MCF2-201ENST00000338585 IGKV1-6A0A0C4DH72 117 aa3.47□□□□□ -1.85
MCF2-201ENST00000338585 A0A1B0GW55 424 aa3.47□□□□□ -1.85
MCF2-201ENST00000338585 A0A1W2PPR1 153 aa3.47□□□□□ -1.85
MCF2-201ENST00000338585 SMLR1H3BR10 107 aa3.47□□□□□ -1.85
MCF2-201ENST00000338585 SSNA1O43805 119 aa3.47□□□□□ -1.85
MCF2-201ENST00000338585 C1QL1O75973 258 aa3.47□□□□□ -1.85
MCF2-201ENST00000338585 KNG1P01042 644 aa3.47□□□□□ -1.85
MCF2-201ENST00000338585 LHBP01229 141 aa3.47□□□□□ -1.85
MCF2-201ENST00000338585 DUX4L2P0CJ85 424 aa3.47□□□□□ -1.85
MCF2-201ENST00000338585 DUX4L3P0CJ86 424 aa3.47□□□□□ -1.85
MCF2-201ENST00000338585 DUX4L4P0CJ87 422 aa3.47□□□□□ -1.85
MCF2-201ENST00000338585 DUX4L5P0CJ88 424 aa3.47□□□□□ -1.85
MCF2-201ENST00000338585 DUX4L6P0CJ89 424 aa3.47□□□□□ -1.85
MCF2-201ENST00000338585 DUX4L7P0CJ90 424 aa3.47□□□□□ -1.85
MCF2-201ENST00000338585 PSG2P11465 335 aa3.47□□□□□ -1.85
MCF2-201ENST00000338585 NFYAP23511 347 aaPredicted RBP3.47□□□□□ -1.85
MCF2-201ENST00000338585 CFHR2P36980 270 aa3.47□□□□□ -1.85
MCF2-201ENST00000338585 GATA4P43694 442 aa3.47□□□□□ -1.85
MCF2-201ENST00000338585 NKX2-5P52952 324 aaPredicted RBP3.47□□□□□ -1.85
MCF2-201ENST00000338585 COL10A1Q03692 680 aa3.47□□□□□ -1.85
MCF2-201ENST00000338585 AESQ08117 197 aa3.47□□□□□ -1.85
MCF2-201ENST00000338585 SMIM21Q3B7S5 101 aa3.47□□□□□ -1.85
MCF2-201ENST00000338585 C4orf46Q504U0 113 aa3.47□□□□□ -1.85
MCF2-201ENST00000338585 METTL11BQ5VVY1 283 aa3.47□□□□□ -1.85
MCF2-201ENST00000338585 ZNF626Q68DY1 528 aa3.47□□□□□ -1.85
MCF2-201ENST00000338585 ZNF660Q6AZW8 331 aaPredicted RBP3.47□□□□□ -1.85
MCF2-201ENST00000338585 DUX4L9Q6RFH8 374 aaPredicted RBP3.47□□□□□ -1.85
MCF2-201ENST00000338585 LHFPL1Q86WI0 220 aa3.47□□□□□ -1.85
MCF2-201ENST00000338585 MUC20Q8N307 709 aaPredicted RBP3.47□□□□□ -1.85
MCF2-201ENST00000338585 ASCC1Q8N9N2 400 aaKnown RBP3.47□□□□□ -1.85
MCF2-201ENST00000338585 DEFB108BQ8NET1 73 aa3.47□□□□□ -1.85
MCF2-201ENST00000338585 WDR89Q96FK6 387 aaPredicted RBP3.47□□□□□ -1.85
MCF2-201ENST00000338585 ZNF2Q9BSG1 426 aaPredicted RBP3.47□□□□□ -1.85
MCF2-201ENST00000338585 MED28Q9H204 178 aa3.47□□□□□ -1.85
MCF2-201ENST00000338585 C5orf66Q9H5L9 145 aa3.47□□□□□ -1.85
MCF2-201ENST00000338585 DYNLRB1Q9NP97 96 aa3.47□□□□□ -1.85
MCF2-201ENST00000338585 DNAJB11Q9UBS4 358 aa3.47□□□□□ -1.85
MCF2-201ENST00000338585 DUX4Q9UBX2 424 aa3.47□□□□□ -1.85
MCF2-201ENST00000338585 PPP1R3CQ9UQK1 317 aa3.47□□□□□ -1.85
MCF2-201ENST00000338585 WIPI2Q9Y4P8 454 aa3.47□□□□□ -1.85
MCF2-201ENST00000338585 DYSFO75923 2080 aa3.47□□□□□ -1.85
MCF2-201ENST00000338585 DSCAMO60469 2012 aa3.47□□□□□ -1.85
MCF2-201ENST00000338585 B8ZZF3 427 aa3.47□□□□□ -1.85
MCF2-201ENST00000338585 BET1O15155 118 aa3.47□□□□□ -1.85
MCF2-201ENST00000338585 FABP7O15540 132 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms