RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 PF4P02776 101 aa8.53□□□□□ -1.04
CAPN3-202ENST00000337571 CSN2P05814 226 aa8.53□□□□□ -1.04
CAPN3-202ENST00000337571 LPLP06858 475 aa8.53□□□□□ -1.04
CAPN3-202ENST00000337571 CCDC159P0C7I6 412 aa8.53□□□□□ -1.04
CAPN3-202ENST00000337571 OR3A4PP47883 348 aa8.53□□□□□ -1.04
CAPN3-202ENST00000337571 MTNR1BP49286 362 aa8.53□□□□□ -1.04
CAPN3-202ENST00000337571 LOXL3P58215 753 aa8.53□□□□□ -1.04
CAPN3-202ENST00000337571 CD83Q01151 205 aa8.53□□□□□ -1.04
CAPN3-202ENST00000337571 ATXN7L3Q14CW9 347 aaPredicted RBP8.53□□□□□ -1.04
CAPN3-202ENST00000337571 TMEM95Q3KNT9 176 aa8.53□□□□□ -1.04
CAPN3-202ENST00000337571 SYS1Q8N2H4 156 aa8.53□□□□□ -1.04
CAPN3-202ENST00000337571 OR10AC1Q8NH08 325 aa8.53□□□□□ -1.04
CAPN3-202ENST00000337571 WIPF2Q8TF74 440 aaPredicted RBP8.53□□□□□ -1.04
CAPN3-202ENST00000337571 LGALS12Q96DT0 336 aa8.53□□□□□ -1.04
CAPN3-202ENST00000337571 ZNF286AQ9HBT8 521 aa8.53□□□□□ -1.04
CAPN3-202ENST00000337571 PCDHB16Q9NRJ7 776 aa8.53□□□□□ -1.04
CAPN3-202ENST00000337571 INPP5EQ9NRR6 644 aa8.53□□□□□ -1.04
CAPN3-202ENST00000337571 MYRFQ9Y2G1 1151 aa8.53□□□□□ -1.04
CAPN3-202ENST00000337571 AMMECR1Q9Y4X0 333 aaPredicted RBP8.53□□□□□ -1.04
CAPN3-202ENST00000337571 TSSC4Q9Y5U2 329 aaPredicted RBP8.53□□□□□ -1.04
CAPN3-202ENST00000337571 MEIKINA0A087WXM9 373 aa8.52□□□□□ -1.05
CAPN3-202ENST00000337571 KBTBD11-OT1A0A1B0GTJ5 212 aa8.52□□□□□ -1.05
CAPN3-202ENST00000337571 ADARB2-AS1A8MUL3 147 aa8.52□□□□□ -1.05
CAPN3-202ENST00000337571 H0YJX3 145 aa8.52□□□□□ -1.05
CAPN3-202ENST00000337571 HSPB6O14558 160 aa8.52□□□□□ -1.05
CAPN3-202ENST00000337571 RAB3AP20336 220 aa8.52□□□□□ -1.05
CAPN3-202ENST00000337571 CD34P28906 385 aa8.52□□□□□ -1.05
CAPN3-202ENST00000337571 RAB40BQ12829 278 aa8.52□□□□□ -1.05
CAPN3-202ENST00000337571 RSU1Q15404 277 aa8.52□□□□□ -1.05
CAPN3-202ENST00000337571 HLA-DRB5Q30154 266 aa8.52□□□□□ -1.05
CAPN3-202ENST00000337571 KLHL22Q53GT1 634 aa8.52□□□□□ -1.05
CAPN3-202ENST00000337571 PAN3Q58A45 887 aaKnown RBP8.52□□□□□ -1.05
CAPN3-202ENST00000337571 KIAA2026Q5HYC2 2103 aa8.52□□□□□ -1.05
CAPN3-202ENST00000337571 KHDC1LQ5JSQ8 128 aa8.52□□□□□ -1.05
CAPN3-202ENST00000337571 TPTE2P1Q5T6R2 138 aa8.52□□□□□ -1.05
CAPN3-202ENST00000337571 ZNF691Q5VV52 312 aa8.52□□□□□ -1.05
CAPN3-202ENST00000337571 Q6P435 159 aa8.52□□□□□ -1.05
CAPN3-202ENST00000337571 BAIAP2L2Q6UXY1 529 aa8.52□□□□□ -1.05
CAPN3-202ENST00000337571 Q6ZPA2 131 aa8.52□□□□□ -1.05
CAPN3-202ENST00000337571 CBR4Q8N4T8 237 aa8.52□□□□□ -1.05
CAPN3-202ENST00000337571 OR9G1Q8NH87 305 aa8.52□□□□□ -1.05
CAPN3-202ENST00000337571 HAVCR2Q8TDQ0 301 aa8.52□□□□□ -1.05
CAPN3-202ENST00000337571 RPEQ96AT9 228 aa8.52□□□□□ -1.05
CAPN3-202ENST00000337571 S100A13Q99584 98 aa8.52□□□□□ -1.05
CAPN3-202ENST00000337571 FAM192AQ9GZU8 254 aa8.52□□□□□ -1.05
CAPN3-202ENST00000337571 ISG20L2Q9H9L3 353 aaKnown RBP8.52□□□□□ -1.05
CAPN3-202ENST00000337571 AASSQ9UDR5 926 aa8.52□□□□□ -1.05
CAPN3-202ENST00000337571 A0A087X0M5 115 aa8.51□□□□□ -1.05
CAPN3-202ENST00000337571 A0A1B0GX30 115 aa8.51□□□□□ -1.05
CAPN3-202ENST00000337571 ZFPL1O95159 310 aa8.51□□□□□ -1.05
CAPN3-202ENST00000337571 CD2P06729 351 aa8.51□□□□□ -1.05
CAPN3-202ENST00000337571 IGLL1P15814 213 aa8.51□□□□□ -1.05
CAPN3-202ENST00000337571 HES1Q14469 280 aa8.51□□□□□ -1.05
CAPN3-202ENST00000337571 RNF144BQ7Z419 303 aa8.51□□□□□ -1.05
CAPN3-202ENST00000337571 PARP16Q8N5Y8 322 aa8.51□□□□□ -1.05
CAPN3-202ENST00000337571 WFDC9Q8NEX5 89 aa8.51□□□□□ -1.05
CAPN3-202ENST00000337571 PXT1Q8NFP0 134 aa8.51□□□□□ -1.05
CAPN3-202ENST00000337571 OR51T1Q8NGJ9 327 aa8.51□□□□□ -1.05
CAPN3-202ENST00000337571 CNIH3Q8TBE1 160 aa8.51□□□□□ -1.05
CAPN3-202ENST00000337571 TNFAIP8L1Q8WVP5 186 aa8.51□□□□□ -1.05
CAPN3-202ENST00000337571 MYDGFQ969H8 173 aa8.51□□□□□ -1.05
CAPN3-202ENST00000337571 TOMM40LQ969M1 308 aa8.51□□□□□ -1.05
CAPN3-202ENST00000337571 PHF21AQ96BD5 680 aa8.51□□□□□ -1.05
CAPN3-202ENST00000337571 COQ2Q96H96 371 aa8.51□□□□□ -1.05
CAPN3-202ENST00000337571 PDCD1LG2Q9BQ51 273 aa8.51□□□□□ -1.05
CAPN3-202ENST00000337571 C9orf16Q9BUW7 83 aa8.51□□□□□ -1.05
CAPN3-202ENST00000337571 PPIL3Q9H2H8 161 aaKnown RBP8.51□□□□□ -1.05
CAPN3-202ENST00000337571 AMBNQ9NP70 447 aa8.51□□□□□ -1.05
CAPN3-202ENST00000337571 ERVK13-1Q9NX77 482 aa8.51□□□□□ -1.05
CAPN3-202ENST00000337571 RPL36Q9Y3U8 105 aaKnown RBP8.51□□□□□ -1.05
CAPN3-202ENST00000337571 LOC100130705A0A1B0GUX0 176 aa8.5□□□□□ -1.05
CAPN3-202ENST00000337571 LY6LH3BQJ8 138 aa8.5□□□□□ -1.05
CAPN3-202ENST00000337571 J3QR06 171 aa8.5□□□□□ -1.05
CAPN3-202ENST00000337571 HTR3BO95264 441 aa8.5□□□□□ -1.05
CAPN3-202ENST00000337571 DUS4LO95620 317 aaKnown RBP8.5□□□□□ -1.05
CAPN3-202ENST00000337571 CSTBP04080 98 aaKnown RBP8.5□□□□□ -1.05
CAPN3-202ENST00000337571 GDNFP39905 211 aa8.5□□□□□ -1.05
CAPN3-202ENST00000337571 GLP1RP43220 463 aa8.5□□□□□ -1.05
CAPN3-202ENST00000337571 KCNJ3P48549 501 aa8.5□□□□□ -1.05
CAPN3-202ENST00000337571 RAB7AP51149 207 aa8.5□□□□□ -1.05
CAPN3-202ENST00000337571 ZP1P60852 638 aa8.5□□□□□ -1.05
CAPN3-202ENST00000337571 SLC35A2P78381 396 aa8.5□□□□□ -1.05
CAPN3-202ENST00000337571 MADCAM1Q13477 382 aa8.5□□□□□ -1.05
CAPN3-202ENST00000337571 CDK5R1Q15078 307 aa8.5□□□□□ -1.05
CAPN3-202ENST00000337571 LTC4SQ16873 150 aa8.5□□□□□ -1.05
CAPN3-202ENST00000337571 C17orf58Q2M2W7 97 aa8.5□□□□□ -1.05
CAPN3-202ENST00000337571 FOXB2Q5VYV0 432 aa8.5□□□□□ -1.05
CAPN3-202ENST00000337571 LPCAT4Q643R3 524 aa8.5□□□□□ -1.05
CAPN3-202ENST00000337571 ELP2Q6IA86 826 aa8.5□□□□□ -1.05
CAPN3-202ENST00000337571 SLC16A12Q6ZSM3 486 aa8.5□□□□□ -1.05
CAPN3-202ENST00000337571 THNSL2Q86YJ6 484 aa8.5□□□□□ -1.05
CAPN3-202ENST00000337571 RHOXF1Q8NHV9 184 aa8.5□□□□□ -1.05
CAPN3-202ENST00000337571 NCOR1P1Q9H4R4 102 aa8.5□□□□□ -1.05
CAPN3-202ENST00000337571 FAM118AQ9NWS6 357 aa8.5□□□□□ -1.05
CAPN3-202ENST00000337571 AURKAIP1Q9NWT8 199 aaPredicted RBP8.5□□□□□ -1.05
CAPN3-202ENST00000337571 CALYQ9NYX4 217 aa8.5□□□□□ -1.05
CAPN3-202ENST00000337571 IDI2-AS1Q9NZ38 188 aa8.5□□□□□ -1.05
CAPN3-202ENST00000337571 KIF25Q9UIL4 384 aa8.5□□□□□ -1.05
CAPN3-202ENST00000337571 ING4Q9UNL4 249 aa8.5□□□□□ -1.05
CAPN3-202ENST00000337571 MOB4Q9Y3A3 225 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms