RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 MPV17P39210 176 aa7.55□□□□□ -1.2
SNCA-201ENST00000336904 GLP1RP43220 463 aa7.55□□□□□ -1.2
SNCA-201ENST00000336904 LPAR6P43657 344 aa7.55□□□□□ -1.2
SNCA-201ENST00000336904 TMEM187Q14656 261 aa7.55□□□□□ -1.2
SNCA-201ENST00000336904 FAM189A2Q15884 450 aa7.55□□□□□ -1.2
SNCA-201ENST00000336904 CEACAM21Q3KPI0 293 aa7.55□□□□□ -1.2
SNCA-201ENST00000336904 TBC1D26Q86UD7 250 aa7.55□□□□□ -1.2
SNCA-201ENST00000336904 TMEM217Q8N7C4 229 aa7.55□□□□□ -1.2
SNCA-201ENST00000336904 SPSB4Q96A44 273 aa7.55□□□□□ -1.2
SNCA-201ENST00000336904 CNTNAP3BQ96NU0 1288 aa7.55□□□□□ -1.2
SNCA-201ENST00000336904 SCGB3A2Q96PL1 93 aa7.55□□□□□ -1.2
SNCA-201ENST00000336904 CNTNAP3Q9BZ76 1288 aa7.55□□□□□ -1.2
SNCA-201ENST00000336904 TAF9BQ9HBM6 251 aa7.55□□□□□ -1.2
SNCA-201ENST00000336904 MSL2Q9HCI7 577 aa7.55□□□□□ -1.2
SNCA-201ENST00000336904 ZDHHC8Q9ULC8 765 aa7.55□□□□□ -1.2
SNCA-201ENST00000336904 ZNF175Q9Y473 711 aa7.55□□□□□ -1.2
SNCA-201ENST00000336904 DOCK11Q5JSL3 2073 aa7.55□□□□□ -1.2
SNCA-201ENST00000336904 LRBAP50851 2863 aa7.55□□□□□ -1.2
SNCA-201ENST00000336904 CEACAM18A8MTB9 384 aa7.55□□□□□ -1.2
SNCA-201ENST00000336904 IFNA21P01568 189 aa7.55□□□□□ -1.2
SNCA-201ENST00000336904 GNRHRP30968 328 aa7.55□□□□□ -1.2
SNCA-201ENST00000336904 FABP6P51161 128 aa7.55□□□□□ -1.2
SNCA-201ENST00000336904 POLR2GP62487 172 aaKnown RBP eCLIP7.55□□□□□ -1.2
SNCA-201ENST00000336904 FBXW12Q6X9E4 464 aa7.55□□□□□ -1.2
SNCA-201ENST00000336904 ETV3LQ6ZN32 361 aa7.55□□□□□ -1.2
SNCA-201ENST00000336904 MKXQ8IYA7 352 aa7.55□□□□□ -1.2
SNCA-201ENST00000336904 C17orf50Q8WW18 174 aa7.55□□□□□ -1.2
SNCA-201ENST00000336904 BCL2L14Q9BZR8 327 aa7.55□□□□□ -1.2
SNCA-201ENST00000336904 SLC25A32Q9H2D1 315 aa7.55□□□□□ -1.2
SNCA-201ENST00000336904 RGCCQ9H4X1 137 aa7.55□□□□□ -1.2
SNCA-201ENST00000336904 WFDC1Q9HC57 220 aa7.55□□□□□ -1.2
SNCA-201ENST00000336904 TRAV24A0A0B4J272 114 aa7.54□□□□□ -1.2
SNCA-201ENST00000336904 K7EM74 188 aa7.54□□□□□ -1.2
SNCA-201ENST00000336904 CNOT4O95628 575 aaKnown RBP7.54□□□□□ -1.2
SNCA-201ENST00000336904 CAV2P51636 162 aa7.54□□□□□ -1.2
SNCA-201ENST00000336904 LINC00205P59089 165 aa7.54□□□□□ -1.2
SNCA-201ENST00000336904 CYCSP99999 105 aaKnown RBP7.54□□□□□ -1.2
SNCA-201ENST00000336904 ZNF169Q14929 603 aaPredicted RBP7.54□□□□□ -1.2
SNCA-201ENST00000336904 LTC4SQ16873 150 aa7.54□□□□□ -1.2
SNCA-201ENST00000336904 ZNF528Q3MIS6 628 aa7.54□□□□□ -1.2
SNCA-201ENST00000336904 CXorf66Q5JRM2 361 aaPredicted RBP7.54□□□□□ -1.2
SNCA-201ENST00000336904 FAM180AQ6UWF9 173 aa7.54□□□□□ -1.2
SNCA-201ENST00000336904 CBLN2Q8IUK8 224 aa7.54□□□□□ -1.2
SNCA-201ENST00000336904 OR4A4PQ8NGN8 299 aa7.54□□□□□ -1.2
SNCA-201ENST00000336904 SLC25A40Q8TBP6 338 aa7.54□□□□□ -1.2
SNCA-201ENST00000336904 NUP50Q9UKX7 468 aa7.54□□□□□ -1.2
SNCA-201ENST00000336904 HSF4Q9ULV5 492 aa7.54□□□□□ -1.2
SNCA-201ENST00000336904 KCNIP3Q9Y2W7 256 aa7.54□□□□□ -1.2
SNCA-201ENST00000336904 UBE2J1Q9Y385 318 aaPredicted RBP7.54□□□□□ -1.2
SNCA-201ENST00000336904 MRPS18CQ9Y3D5 142 aaKnown RBP7.54□□□□□ -1.2
SNCA-201ENST00000336904 FAM24AA6NFZ4 105 aa7.54□□□□□ -1.2
SNCA-201ENST00000336904 SSSCA1O60232 199 aa7.54□□□□□ -1.2
SNCA-201ENST00000336904 EIF3IQ13347 325 aaKnown RBP7.54□□□□□ -1.2
SNCA-201ENST00000336904 PPA1Q15181 289 aa7.54□□□□□ -1.2
SNCA-201ENST00000336904 PRAMEF6Q5VXH4 476 aa7.54□□□□□ -1.2
SNCA-201ENST00000336904 ASCL4Q6XD76 172 aa7.54□□□□□ -1.2
SNCA-201ENST00000336904 C9orf106Q8NAJ2 232 aa7.54□□□□□ -1.2
SNCA-201ENST00000336904 OR1J1Q8NGS3 322 aa7.54□□□□□ -1.2
SNCA-201ENST00000336904 OR5P3Q8WZ94 311 aa7.54□□□□□ -1.2
SNCA-201ENST00000336904 GTF3AQ92664 365 aaKnown RBP7.54□□□□□ -1.2
SNCA-201ENST00000336904 BCL2L2Q92843 193 aaPredicted RBP7.54□□□□□ -1.2
SNCA-201ENST00000336904 PRRX2Q99811 253 aa7.54□□□□□ -1.2
SNCA-201ENST00000336904 USB1Q9BQ65 265 aaKnown RBP7.54□□□□□ -1.2
SNCA-201ENST00000336904 LINC00470Q9BZP3 86 aa7.54□□□□□ -1.2
SNCA-201ENST00000336904 OPN3Q9H1Y3 402 aaPredicted RBP7.54□□□□□ -1.2
SNCA-201ENST00000336904 RNF150Q9ULK6 438 aa7.54□□□□□ -1.2
SNCA-201ENST00000336904 COL12A1Q99715 3063 aa7.54□□□□□ -1.2
SNCA-201ENST00000336904 IGF2RP11717 2491 aa7.54□□□□□ -1.2
SNCA-201ENST00000336904 LOC105371267A0A1B0GV96 52 aa7.54□□□□□ -1.2
SNCA-201ENST00000336904 RPL36A-HNRNPH2H7BZ11 118 aa7.54□□□□□ -1.2
SNCA-201ENST00000336904 ADAM20O43506 726 aa7.54□□□□□ -1.2
SNCA-201ENST00000336904 CST7O76096 145 aa7.54□□□□□ -1.2
SNCA-201ENST00000336904 UBE2NP61088 152 aaKnown RBP7.54□□□□□ -1.2
SNCA-201ENST00000336904 FGF12P61328 243 aa7.54□□□□□ -1.2
SNCA-201ENST00000336904 RPS16P62249 146 aaKnown RBP7.54□□□□□ -1.2
SNCA-201ENST00000336904 ZNF616Q08AN1 781 aa7.54□□□□□ -1.2
SNCA-201ENST00000336904 IL15RAQ13261 267 aa7.54□□□□□ -1.2
SNCA-201ENST00000336904 RNPS1Q15287 305 aaKnown RBP7.54□□□□□ -1.2
SNCA-201ENST00000336904 DHRS11Q6UWP2 260 aa7.54□□□□□ -1.2
SNCA-201ENST00000336904 TFAP2EQ6VUC0 442 aa7.54□□□□□ -1.2
SNCA-201ENST00000336904 ZNF565Q8N9K5 539 aa7.54□□□□□ -1.2
SNCA-201ENST00000336904 MSI2Q96DH6 328 aaKnown RBP7.54□□□□□ -1.2
SNCA-201ENST00000336904 SHARPINQ9H0F6 387 aa7.54□□□□□ -1.2
SNCA-201ENST00000336904 PPP1R3CQ9UQK1 317 aa7.54□□□□□ -1.2
SNCA-201ENST00000336904 AMDHD2Q9Y303 409 aa7.54□□□□□ -1.2
SNCA-201ENST00000336904 USF3Q68DE3 2245 aa7.54□□□□□ -1.2
SNCA-201ENST00000336904 C3orf85A0A1B0GTC6 90 aa7.53□□□□□ -1.2
SNCA-201ENST00000336904 A6NLC8 198 aa7.53□□□□□ -1.2
SNCA-201ENST00000336904 C9JQL5 133 aa7.53□□□□□ -1.2
SNCA-201ENST00000336904 DEDDO75618 318 aa7.53□□□□□ -1.2
SNCA-201ENST00000336904 DTYMKP23919 212 aa7.53□□□□□ -1.2
SNCA-201ENST00000336904 ARR3P36575 388 aa7.53□□□□□ -1.2
SNCA-201ENST00000336904 PPP1CBP62140 327 aa7.53□□□□□ -1.2
SNCA-201ENST00000336904 SMCO1Q147U7 214 aa7.53□□□□□ -1.2
SNCA-201ENST00000336904 VHLLQ6RSH7 139 aa7.53□□□□□ -1.2
SNCA-201ENST00000336904 PLPPR1Q8TBJ4 325 aa7.53□□□□□ -1.2
SNCA-201ENST00000336904 MOB3AQ96BX8 217 aa7.53□□□□□ -1.2
SNCA-201ENST00000336904 Q9N2K0 584 aa7.53□□□□□ -1.2
SNCA-201ENST00000336904 OBP2BQ9NPH6 170 aa7.53□□□□□ -1.2
SNCA-201ENST00000336904 TREM2Q9NZC2 230 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms