RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 NEK7Q8TDX7 302 aa17.89■□□□□ 0.45
TPM1-204ENST00000334895 GPX8Q8TED1 209 aa17.89■□□□□ 0.45
TPM1-204ENST00000334895 C15orf40Q8WUR7 153 aa17.89■□□□□ 0.45
TPM1-204ENST00000334895 SMIM4Q8WVI0 70 aa17.89■□□□□ 0.45
TPM1-204ENST00000334895 NINJ1Q92982 152 aa17.89■□□□□ 0.45
TPM1-204ENST00000334895 MYO9AB2RTY4 2548 aa17.88■□□□□ 0.45
TPM1-204ENST00000334895 VWC2LB2RUY7 222 aa17.88■□□□□ 0.45
TPM1-204ENST00000334895 RBM39Q14498 530 aaKnown RBP17.88■□□□□ 0.45
TPM1-204ENST00000334895 GRK1Q15835 563 aa17.88■□□□□ 0.45
TPM1-204ENST00000334895 BAK1Q16611 211 aa17.88■□□□□ 0.45
TPM1-204ENST00000334895 OR8H2Q8N162 312 aa17.88■□□□□ 0.45
TPM1-204ENST00000334895 LRRC75A-AS1Q8N1F1 130 aa17.88■□□□□ 0.45
TPM1-204ENST00000334895 TMEM185AQ8NFB2 350 aa17.88■□□□□ 0.45
TPM1-204ENST00000334895 FAM168AQ92567 244 aa17.88■□□□□ 0.45
TPM1-204ENST00000334895 COQ2Q96H96 371 aa17.88■□□□□ 0.45
TPM1-204ENST00000334895 NARFLQ9H6Q4 476 aa17.88■□□□□ 0.45
TPM1-204ENST00000334895 ETAA1Q9NY74 926 aa17.88■□□□□ 0.45
TPM1-204ENST00000334895 MEIS3P1A6NDR6 274 aa17.87■□□□□ 0.45
TPM1-204ENST00000334895 GSTZ1O43708 216 aaPredicted RBP17.87■□□□□ 0.45
TPM1-204ENST00000334895 LANCL1O43813 399 aa17.87■□□□□ 0.45
TPM1-204ENST00000334895 NAPSAO96009 420 aa17.87■□□□□ 0.45
TPM1-204ENST00000334895 CSN2P05814 226 aa17.87■□□□□ 0.45
TPM1-204ENST00000334895 CSF3P09919 207 aa17.87■□□□□ 0.45
TPM1-204ENST00000334895 CD40LGP29965 261 aa17.87■□□□□ 0.45
TPM1-204ENST00000334895 GNG2P59768 71 aa17.87■□□□□ 0.45
TPM1-204ENST00000334895 ARFRP1Q13795 201 aa17.87■□□□□ 0.45
TPM1-204ENST00000334895 RSBN1Q5VWQ0 802 aaPredicted RBP17.87■□□□□ 0.45
TPM1-204ENST00000334895 CLEC2AQ6UVW9 174 aa17.87■□□□□ 0.45
TPM1-204ENST00000334895 SLC36A1Q7Z2H8 476 aa17.87■□□□□ 0.45
TPM1-204ENST00000334895 GAPTQ8N292 157 aa17.87■□□□□ 0.45
TPM1-204ENST00000334895 Q8N402 240 aa17.87■□□□□ 0.45
TPM1-204ENST00000334895 GDPD1Q8N9F7 314 aa17.87■□□□□ 0.45
TPM1-204ENST00000334895 MED30Q96HR3 178 aa17.87■□□□□ 0.45
TPM1-204ENST00000334895 CMSS1Q9BQ75 279 aaKnown RBP17.87■□□□□ 0.45
TPM1-204ENST00000334895 FAM234AQ9H0X4 552 aa17.87■□□□□ 0.45
TPM1-204ENST00000334895 SCPEP1Q9HB40 452 aa17.87■□□□□ 0.45
TPM1-204ENST00000334895 ING3Q9NXR8 418 aa17.87■□□□□ 0.45
TPM1-204ENST00000334895 PRRC2AP48634 2157 aaKnown RBP17.87■□□□□ 0.45
TPM1-204ENST00000334895 IGHV4-30-2A0A087WSY4 118 aa17.87■□□□□ 0.45
TPM1-204ENST00000334895 GABARAPH6UMI1 98 aa17.87■□□□□ 0.45
TPM1-204ENST00000334895 CD3GP09693 182 aa17.87■□□□□ 0.45
TPM1-204ENST00000334895 MRPS10P82664 201 aaKnown RBP17.87■□□□□ 0.45
TPM1-204ENST00000334895 AESQ08117 197 aa17.87■□□□□ 0.45
TPM1-204ENST00000334895 ZNF497Q6ZNH5 498 aa17.87■□□□□ 0.45
TPM1-204ENST00000334895 TRAPPC6BQ86SZ2 158 aa17.87■□□□□ 0.45
TPM1-204ENST00000334895 TRIM63Q969Q1 353 aa17.87■□□□□ 0.45
TPM1-204ENST00000334895 VPS13CQ709C8 3753 aa17.86■□□□□ 0.45
TPM1-204ENST00000334895 NDUFS8O00217 210 aa17.86■□□□□ 0.45
TPM1-204ENST00000334895 LPLP06858 475 aa17.86■□□□□ 0.45
TPM1-204ENST00000334895 KCNJ3P48549 501 aa17.86■□□□□ 0.45
TPM1-204ENST00000334895 PAX5Q02548 391 aa17.86■□□□□ 0.45
TPM1-204ENST00000334895 ZNF841Q6ZN19 808 aa17.86■□□□□ 0.45
TPM1-204ENST00000334895 SPICQ8N5J4 248 aa17.86■□□□□ 0.45
TPM1-204ENST00000334895 TPRX1Q8N7U7 411 aa17.86■□□□□ 0.45
TPM1-204ENST00000334895 MRPL30Q8TCC3 161 aaKnown RBP17.86■□□□□ 0.45
TPM1-204ENST00000334895 PIMREGQ9BSJ6 248 aa17.86■□□□□ 0.45
TPM1-204ENST00000334895 C12orf4Q9NQ89 552 aa17.86■□□□□ 0.45
TPM1-204ENST00000334895 KLK11Q9UBX7 282 aa17.86■□□□□ 0.45
TPM1-204ENST00000334895 ZNF230Q9UIE0 474 aaPredicted RBP17.86■□□□□ 0.45
TPM1-204ENST00000334895 RBMX2Q9Y388 322 aaKnown RBP17.86■□□□□ 0.45
TPM1-204ENST00000334895 SULT1C2O00338 296 aa17.85■□□□□ 0.45
TPM1-204ENST00000334895 DVL1O14640 695 aa17.85■□□□□ 0.45
TPM1-204ENST00000334895 MGST3O14880 152 aa17.85■□□□□ 0.45
TPM1-204ENST00000334895 WNT2P09544 360 aa17.85■□□□□ 0.45
TPM1-204ENST00000334895 RPS2P15880 293 aaKnown RBP17.85■□□□□ 0.45
TPM1-204ENST00000334895 SEC61A1P61619 476 aaKnown RBP17.85■□□□□ 0.45
TPM1-204ENST00000334895 GVQW1Q8N7I0 195 aa17.85■□□□□ 0.45
TPM1-204ENST00000334895 PPP1R35Q8TAP8 253 aa17.85■□□□□ 0.45
TPM1-204ENST00000334895 FCAMRQ8WWV6 532 aa17.85■□□□□ 0.45
TPM1-204ENST00000334895 THAP7Q9BT49 309 aaPredicted RBP17.85■□□□□ 0.45
TPM1-204ENST00000334895 PATZ1Q9HBE1 687 aaKnown RBP17.85■□□□□ 0.45
TPM1-204ENST00000334895 SLC25A10Q9UBX3 287 aaPredicted RBP17.85■□□□□ 0.45
TPM1-204ENST00000334895 ITGB1BP2Q9UKP3 347 aa17.85■□□□□ 0.45
TPM1-204ENST00000334895 DSCAML1Q8TD84 2053 aa17.84■□□□□ 0.45
TPM1-204ENST00000334895 F5H0A9 414 aaPredicted RBP17.84■□□□□ 0.45
TPM1-204ENST00000334895 MT-ND4P03905 459 aa17.84■□□□□ 0.45
TPM1-204ENST00000334895 FCER2P06734 321 aa17.84■□□□□ 0.45
TPM1-204ENST00000334895 GLIPR1P48060 266 aa17.84■□□□□ 0.45
TPM1-204ENST00000334895 EDDM3AQ14507 147 aa17.84■□□□□ 0.45
TPM1-204ENST00000334895 CLEC12BQ2HXU8 276 aa17.84■□□□□ 0.45
TPM1-204ENST00000334895 KRTAP1-3Q8IUG1 177 aa17.84■□□□□ 0.45
TPM1-204ENST00000334895 CCDC32Q9BV29 185 aa17.84■□□□□ 0.45
TPM1-204ENST00000334895 MTFP1Q9UDX5 166 aa17.84■□□□□ 0.45
TPM1-204ENST00000334895 MIOXQ9UGB7 285 aa17.84■□□□□ 0.45
TPM1-204ENST00000334895 KIF25Q9UIL4 384 aa17.84■□□□□ 0.45
TPM1-204ENST00000334895 ANAPC10Q9UM13 185 aa17.84■□□□□ 0.45
TPM1-204ENST00000334895 NDUFB3O43676 98 aa17.83■□□□□ 0.45
TPM1-204ENST00000334895 ORC5O43913 435 aa17.83■□□□□ 0.45
TPM1-204ENST00000334895 FCGR3AP08637 254 aa17.83■□□□□ 0.45
TPM1-204ENST00000334895 DSCR9P59020 149 aa17.83■□□□□ 0.45
TPM1-204ENST00000334895 KRBOX4Q5JUW0 171 aa17.83■□□□□ 0.45
TPM1-204ENST00000334895 SLC35E4Q6ICL7 350 aa17.83■□□□□ 0.45
TPM1-204ENST00000334895 OR5D13Q8NGL4 314 aa17.83■□□□□ 0.45
TPM1-204ENST00000334895 OR4K15Q8NH41 348 aa17.83■□□□□ 0.45
TPM1-204ENST00000334895 MAFIPQ8WZ33 124 aa17.83■□□□□ 0.45
TPM1-204ENST00000334895 OCSTAMPQ9BR26 566 aa17.83■□□□□ 0.45
TPM1-204ENST00000334895 CREBBPQ92793 2442 aa17.83■□□□□ 0.44
TPM1-204ENST00000334895 TRBV6-6A0A0A6YYG2 114 aa17.83■□□□□ 0.44
TPM1-204ENST00000334895 TRAV39A0A0B4J263 110 aa17.83■□□□□ 0.44
TPM1-204ENST00000334895 TMEM30CPA0ZSE6 113 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms