RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 CXorf66Q5JRM2 361 aaPredicted RBP11.92□□□□□ -0.5
SYNE3-201ENST00000334258 ZNF880Q6PDB4 577 aa11.92□□□□□ -0.5
SYNE3-201ENST00000334258 SLC35E3Q7Z769 313 aa11.92□□□□□ -0.5
SYNE3-201ENST00000334258 BATF2Q8N1L9 274 aa11.92□□□□□ -0.5
SYNE3-201ENST00000334258 CABLES2Q9BTV7 478 aa11.92□□□□□ -0.5
SYNE3-201ENST00000334258 BOD1L1Q8NFC6 3051 aa11.92□□□□□ -0.5
SYNE3-201ENST00000334258 SDK2Q58EX2 2172 aa11.92□□□□□ -0.5
SYNE3-201ENST00000334258 A6NNC1 897 aa11.91□□□□□ -0.5
SYNE3-201ENST00000334258 ZNF814B7Z6K7 855 aa11.91□□□□□ -0.5
SYNE3-201ENST00000334258 TRAF3IP2O43734 574 aaPredicted RBP11.91□□□□□ -0.5
SYNE3-201ENST00000334258 CA11O75493 328 aa11.91□□□□□ -0.5
SYNE3-201ENST00000334258 ALDH3B1P43353 468 aa11.91□□□□□ -0.5
SYNE3-201ENST00000334258 SLC25A47Q6Q0C1 308 aa11.91□□□□□ -0.5
SYNE3-201ENST00000334258 SLC16A14Q7RTX9 510 aa11.91□□□□□ -0.5
SYNE3-201ENST00000334258 OR13D1Q8NGV5 346 aa11.91□□□□□ -0.5
SYNE3-201ENST00000334258 GNPNAT1Q96EK6 184 aaPredicted RBP11.91□□□□□ -0.5
SYNE3-201ENST00000334258 GPHA2Q96T91 129 aa11.91□□□□□ -0.5
SYNE3-201ENST00000334258 HIST1H2BLQ99880 126 aa11.91□□□□□ -0.5
SYNE3-201ENST00000334258 RBM24Q9BX46 236 aaKnown RBP11.91□□□□□ -0.5
SYNE3-201ENST00000334258 METTL7AQ9H8H3 244 aa11.91□□□□□ -0.5
SYNE3-201ENST00000334258 ZNF286AQ9HBT8 521 aa11.91□□□□□ -0.5
SYNE3-201ENST00000334258 ASCL3Q9NQ33 180 aa11.91□□□□□ -0.5
SYNE3-201ENST00000334258 DECR2Q9NUI1 292 aa11.91□□□□□ -0.5
SYNE3-201ENST00000334258 KLHL13Q9P2N7 655 aa11.91□□□□□ -0.5
SYNE3-201ENST00000334258 CLDN34H7C241 214 aa11.91□□□□□ -0.5
SYNE3-201ENST00000334258 MSTNO14793 375 aa11.91□□□□□ -0.5
SYNE3-201ENST00000334258 OR2AE1Q8NHA4 323 aa11.91□□□□□ -0.5
SYNE3-201ENST00000334258 CCDC74BQ96LY2 380 aa11.91□□□□□ -0.5
SYNE3-201ENST00000334258 PRO3102Q9H379 93 aa11.91□□□□□ -0.5
SYNE3-201ENST00000334258 HBE1P02100 147 aa11.91□□□□□ -0.5
SYNE3-201ENST00000334258 AADACP22760 399 aa11.91□□□□□ -0.5
SYNE3-201ENST00000334258 GNRHRP30968 328 aa11.91□□□□□ -0.5
SYNE3-201ENST00000334258 MPV17LQ2QL34 196 aa11.91□□□□□ -0.5
SYNE3-201ENST00000334258 PIGYQ3MUY2 71 aa11.91□□□□□ -0.5
SYNE3-201ENST00000334258 CRIP3Q6Q6R5 217 aa11.91□□□□□ -0.5
SYNE3-201ENST00000334258 GJC3Q8NFK1 279 aa11.91□□□□□ -0.5
SYNE3-201ENST00000334258 OR1L3Q8NH93 324 aa11.91□□□□□ -0.5
SYNE3-201ENST00000334258 GUCD1Q96NT3 240 aa11.91□□□□□ -0.5
SYNE3-201ENST00000334258 ZNF442Q9H7R0 627 aa11.91□□□□□ -0.5
SYNE3-201ENST00000334258 C3orf85A0A1B0GTC6 90 aa11.9□□□□□ -0.5
SYNE3-201ENST00000334258 BCAT2O15382 392 aaPredicted RBP11.9□□□□□ -0.5
SYNE3-201ENST00000334258 PITX3O75364 302 aa11.9□□□□□ -0.5
SYNE3-201ENST00000334258 CARD18P57730 90 aa11.9□□□□□ -0.5
SYNE3-201ENST00000334258 ZNF506Q5JVG8 444 aa11.9□□□□□ -0.5
SYNE3-201ENST00000334258 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.9□□□□□ -0.5
SYNE3-201ENST00000334258 FAM69BQ5VUD6 431 aa11.9□□□□□ -0.5
SYNE3-201ENST00000334258 LCN15Q6UWW0 184 aa11.9□□□□□ -0.5
SYNE3-201ENST00000334258 DTX1Q86Y01 620 aa11.9□□□□□ -0.5
SYNE3-201ENST00000334258 THNSL2Q86YJ6 484 aa11.9□□□□□ -0.5
SYNE3-201ENST00000334258 LRTM2Q8N967 370 aa11.9□□□□□ -0.5
SYNE3-201ENST00000334258 RBMXL1Q96E39 390 aaKnown RBP11.9□□□□□ -0.5
SYNE3-201ENST00000334258 TMEM208Q9BTX3 173 aa11.9□□□□□ -0.5
SYNE3-201ENST00000334258 PARD6GQ9BYG4 376 aaPredicted RBP11.9□□□□□ -0.5
SYNE3-201ENST00000334258 NCOA6Q14686 2063 aaPredicted RBP11.9□□□□□ -0.5
SYNE3-201ENST00000334258 A0A1W2PNV4 684 aa11.9□□□□□ -0.5
SYNE3-201ENST00000334258 H3BP45 60 aa11.9□□□□□ -0.5
SYNE3-201ENST00000334258 M0R135 149 aa11.9□□□□□ -0.5
SYNE3-201ENST00000334258 HLA-HP01893 362 aa11.9□□□□□ -0.5
SYNE3-201ENST00000334258 FUT3P21217 361 aa11.9□□□□□ -0.5
SYNE3-201ENST00000334258 S100A7P31151 101 aa11.9□□□□□ -0.5
SYNE3-201ENST00000334258 ZNF154Q13106 437 aa11.9□□□□□ -0.5
SYNE3-201ENST00000334258 ZNF441Q8N8Z8 693 aa11.9□□□□□ -0.5
SYNE3-201ENST00000334258 OR4D5Q8NGN0 318 aa11.9□□□□□ -0.5
SYNE3-201ENST00000334258 ZNF799Q96GE5 643 aa11.9□□□□□ -0.5
SYNE3-201ENST00000334258 SPIN2AQ99865 258 aa11.9□□□□□ -0.5
SYNE3-201ENST00000334258 SPIN2BQ9BPZ2 258 aa11.9□□□□□ -0.5
SYNE3-201ENST00000334258 HSF4Q9ULV5 492 aa11.9□□□□□ -0.5
SYNE3-201ENST00000334258 RALGAPA1Q6GYQ0 2036 aa11.9□□□□□ -0.51
SYNE3-201ENST00000334258 MPPED1O15442 326 aa11.89□□□□□ -0.51
SYNE3-201ENST00000334258 ADAM20O43506 726 aa11.89□□□□□ -0.51
SYNE3-201ENST00000334258 OR2J2O76002 312 aa11.89□□□□□ -0.51
SYNE3-201ENST00000334258 MSR1P21757 451 aa11.89□□□□□ -0.51
SYNE3-201ENST00000334258 FASLGP48023 281 aa11.89□□□□□ -0.51
SYNE3-201ENST00000334258 CD81P60033 236 aa11.89□□□□□ -0.51
SYNE3-201ENST00000334258 Q8NFD4 153 aa11.89□□□□□ -0.51
SYNE3-201ENST00000334258 CLDND2Q8NHS1 167 aa11.89□□□□□ -0.51
SYNE3-201ENST00000334258 BORCS8Q96FH0 119 aa11.89□□□□□ -0.51
SYNE3-201ENST00000334258 GLRX2Q9NS18 164 aa11.89□□□□□ -0.51
SYNE3-201ENST00000334258 THADAQ6YHU6 1953 aa11.89□□□□□ -0.51
SYNE3-201ENST00000334258 PROB1E7EW31 1015 aa11.89□□□□□ -0.51
SYNE3-201ENST00000334258 GDF9O60383 454 aa11.89□□□□□ -0.51
SYNE3-201ENST00000334258 FGF7P21781 194 aa11.89□□□□□ -0.51
SYNE3-201ENST00000334258 DTYMKP23919 212 aa11.89□□□□□ -0.51
SYNE3-201ENST00000334258 MVB12AQ96EY5 273 aa11.89□□□□□ -0.51
SYNE3-201ENST00000334258 OXGR1Q96P68 337 aa11.89□□□□□ -0.51
SYNE3-201ENST00000334258 GAB2Q9UQC2 676 aa11.89□□□□□ -0.51
SYNE3-201ENST00000334258 PTPRZ1P23471 2315 aaPredicted RBP11.89□□□□□ -0.51
SYNE3-201ENST00000334258 GVINP1Q7Z2Y8 2422 aa11.89□□□□□ -0.51
SYNE3-201ENST00000334258 CDS2O95674 445 aa11.89□□□□□ -0.51
SYNE3-201ENST00000334258 NKAIN1Q4KMZ8 207 aa11.89□□□□□ -0.51
SYNE3-201ENST00000334258 ZNF100Q8IYN0 542 aa11.89□□□□□ -0.51
SYNE3-201ENST00000334258 IL22RA1Q8N6P7 574 aa11.89□□□□□ -0.51
SYNE3-201ENST00000334258 MRGPRX4Q96LA9 322 aa11.89□□□□□ -0.51
SYNE3-201ENST00000334258 GPR87Q9BY21 358 aa11.89□□□□□ -0.51
SYNE3-201ENST00000334258 ANGPTL4Q9BY76 406 aa11.89□□□□□ -0.51
SYNE3-201ENST00000334258 PITPNC1Q9UKF7 332 aa11.89□□□□□ -0.51
SYNE3-201ENST00000334258 SIT1Q9Y3P8 196 aa11.89□□□□□ -0.51
SYNE3-201ENST00000334258 CPAMD8Q8IZJ3 1885 aa11.88□□□□□ -0.51
SYNE3-201ENST00000334258 MMP9P14780 707 aa11.88□□□□□ -0.51
SYNE3-201ENST00000334258 PNLIPP16233 465 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms