RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 MICBQ29980 383 aa13.74□□□□□ -0.21
SHOX-201ENST00000334060 CLEC12BQ2HXU8 276 aa13.74□□□□□ -0.21
SHOX-201ENST00000334060 RNASE12Q5GAN4 147 aaKnown RBP13.74□□□□□ -0.21
SHOX-201ENST00000334060 OR4S1Q8NGB4 309 aa13.74□□□□□ -0.21
SHOX-201ENST00000334060 PLPPR1Q8TBJ4 325 aa13.74□□□□□ -0.21
SHOX-201ENST00000334060 FAM168AQ92567 244 aa13.74□□□□□ -0.21
SHOX-201ENST00000334060 CPNE2Q96FN4 548 aaPredicted RBP13.74□□□□□ -0.21
SHOX-201ENST00000334060 SULT4A1Q9BR01 284 aa13.74□□□□□ -0.21
SHOX-201ENST00000334060 DCTN5Q9BTE1 182 aa13.74□□□□□ -0.21
SHOX-201ENST00000334060 SHARPINQ9H0F6 387 aa13.74□□□□□ -0.21
SHOX-201ENST00000334060 CST11Q9H112 138 aa13.74□□□□□ -0.21
SHOX-201ENST00000334060 UBE2QL1A1L167 161 aa13.74□□□□□ -0.21
SHOX-201ENST00000334060 VWC2LB2RUY7 222 aa13.74□□□□□ -0.21
SHOX-201ENST00000334060 TMPRSS2O15393 492 aa13.74□□□□□ -0.21
SHOX-201ENST00000334060 ZNF737O75373 536 aa13.74□□□□□ -0.21
SHOX-201ENST00000334060 CD83Q01151 205 aa13.74□□□□□ -0.21
SHOX-201ENST00000334060 ATXN7L3Q14CW9 347 aaPredicted RBP13.74□□□□□ -0.21
SHOX-201ENST00000334060 SMIM21Q3B7S5 101 aa13.74□□□□□ -0.21
SHOX-201ENST00000334060 LRRC28Q86X40 367 aaPredicted RBP13.74□□□□□ -0.21
SHOX-201ENST00000334060 CIARTQ8N365 385 aaPredicted RBP13.74□□□□□ -0.21
SHOX-201ENST00000334060 FYTTD1Q96QD9 318 aaKnown RBP13.74□□□□□ -0.21
SHOX-201ENST00000334060 FAAP24Q9BTP7 215 aa13.74□□□□□ -0.21
SHOX-201ENST00000334060 TM2D1Q9BX74 207 aa13.74□□□□□ -0.21
SHOX-201ENST00000334060 FLNAP21333 2647 aaKnown RBP13.74□□□□□ -0.21
SHOX-201ENST00000334060 A0A096LNT2 108 aa13.73□□□□□ -0.21
SHOX-201ENST00000334060 A0A0X1KG70 313 aa13.73□□□□□ -0.21
SHOX-201ENST00000334060 FABP12A6NFH5 140 aa13.73□□□□□ -0.21
SHOX-201ENST00000334060 PHF1O43189 567 aaPredicted RBP13.73□□□□□ -0.21
SHOX-201ENST00000334060 BLVRBP30043 206 aaPredicted RBP13.73□□□□□ -0.21
SHOX-201ENST00000334060 RRAS2P62070 204 aaPredicted RBP13.73□□□□□ -0.21
SHOX-201ENST00000334060 MRPS11P82912 194 aaKnown RBP13.73□□□□□ -0.21
SHOX-201ENST00000334060 GUCA2AQ02747 115 aa13.73□□□□□ -0.21
SHOX-201ENST00000334060 ZNF79Q15937 498 aa13.73□□□□□ -0.21
SHOX-201ENST00000334060 TOR2AQ5JU69 321 aa13.73□□□□□ -0.21
SHOX-201ENST00000334060 CNIH2Q6PI25 160 aa13.73□□□□□ -0.21
SHOX-201ENST00000334060 FAM131AQ6UXB0 335 aa13.73□□□□□ -0.21
SHOX-201ENST00000334060 OR2W3Q7Z3T1 314 aa13.73□□□□□ -0.21
SHOX-201ENST00000334060 FAM89BQ8N5H3 189 aa13.73□□□□□ -0.21
SHOX-201ENST00000334060 BEX4Q9NWD9 120 aaPredicted RBP13.73□□□□□ -0.21
SHOX-201ENST00000334060 FBLN5Q9UBX5 448 aa13.73□□□□□ -0.21
SHOX-201ENST00000334060 GLS2Q9UI32 602 aa13.73□□□□□ -0.21
SHOX-201ENST00000334060 RAB22AQ9UL26 194 aa13.73□□□□□ -0.21
SHOX-201ENST00000334060 RABL2BQ9UNT1 228 aa13.73□□□□□ -0.21
SHOX-201ENST00000334060 ADAM20O43506 726 aa13.72□□□□□ -0.21
SHOX-201ENST00000334060 SLC22A5O76082 557 aa13.72□□□□□ -0.21
SHOX-201ENST00000334060 KNG1P01042 644 aa13.72□□□□□ -0.21
SHOX-201ENST00000334060 UBBP0CG47 229 aa13.72□□□□□ -0.21
SHOX-201ENST00000334060 CHATP28329 748 aa13.72□□□□□ -0.21
SHOX-201ENST00000334060 OR3A1P47881 315 aa13.72□□□□□ -0.21
SHOX-201ENST00000334060 PDLIM4P50479 330 aa13.72□□□□□ -0.21
SHOX-201ENST00000334060 ART1P52961 327 aa13.72□□□□□ -0.21
SHOX-201ENST00000334060 ERVFRD-1P60508 538 aa13.72□□□□□ -0.21
SHOX-201ENST00000334060 BAK1Q16611 211 aa13.72□□□□□ -0.21
SHOX-201ENST00000334060 UBE2NLQ5JXB2 153 aa13.72□□□□□ -0.21
SHOX-201ENST00000334060 ZNF788Q6ZQV5 615 aa13.72□□□□□ -0.21
SHOX-201ENST00000334060 SUMF2Q8NBJ7 301 aa13.72□□□□□ -0.21
SHOX-201ENST00000334060 CLDND2Q8NHS1 167 aa13.72□□□□□ -0.21
SHOX-201ENST00000334060 MARVELD1Q9BSK0 173 aa13.72□□□□□ -0.21
SHOX-201ENST00000334060 GHRLQ9UBU3 117 aa13.72□□□□□ -0.21
SHOX-201ENST00000334060 MALRD1Q5VYJ5 2156 aa13.72□□□□□ -0.21
SHOX-201ENST00000334060 MEIS3P1A6NDR6 274 aa13.72□□□□□ -0.21
SHOX-201ENST00000334060 TMEM235A6NFC5 223 aa13.72□□□□□ -0.21
SHOX-201ENST00000334060 C4BPBP20851 252 aa13.72□□□□□ -0.21
SHOX-201ENST00000334060 PITPNBP48739 271 aa13.72□□□□□ -0.21
SHOX-201ENST00000334060 ZNF841Q6ZN19 808 aa13.72□□□□□ -0.21
SHOX-201ENST00000334060 C1orf87Q8N0U7 546 aa13.72□□□□□ -0.21
SHOX-201ENST00000334060 UBALD1Q8TB05 177 aa13.72□□□□□ -0.21
SHOX-201ENST00000334060 MAFIPQ8WZ33 124 aa13.72□□□□□ -0.21
SHOX-201ENST00000334060 CREB3L1Q96BA8 519 aa13.72□□□□□ -0.21
SHOX-201ENST00000334060 KCTD12Q96CX2 325 aaKnown RBP13.72□□□□□ -0.21
SHOX-201ENST00000334060 MBD6Q96DN6 1003 aa13.72□□□□□ -0.21
SHOX-201ENST00000334060 Q96MF0 132 aa13.72□□□□□ -0.21
SHOX-201ENST00000334060 C11orf54Q9H0W9 315 aaPredicted RBP13.72□□□□□ -0.21
SHOX-201ENST00000334060 EXTL2Q9UBQ6 330 aa13.72□□□□□ -0.21
SHOX-201ENST00000334060 FBXO9Q9UK97 447 aaPredicted RBP13.72□□□□□ -0.21
SHOX-201ENST00000334060 ADAM30Q9UKF2 790 aa13.72□□□□□ -0.21
SHOX-201ENST00000334060 MRPS7Q9Y2R9 242 aaKnown RBP13.72□□□□□ -0.21
SHOX-201ENST00000334060 ACANP16112 2415 aa13.72□□□□□ -0.21
SHOX-201ENST00000334060 TRAV18A0A075B6X5 111 aa13.71□□□□□ -0.21
SHOX-201ENST00000334060 A8MV72 311 aaPredicted RBP13.71□□□□□ -0.21
SHOX-201ENST00000334060 DEGS1O15121 323 aa13.71□□□□□ -0.21
SHOX-201ENST00000334060 IFNA7P01567 189 aa13.71□□□□□ -0.21
SHOX-201ENST00000334060 GIFP27352 417 aa13.71□□□□□ -0.21
SHOX-201ENST00000334060 MDH2P40926 338 aaKnown RBP13.71□□□□□ -0.21
SHOX-201ENST00000334060 DLX1P56177 255 aa13.71□□□□□ -0.21
SHOX-201ENST00000334060 TMEM33P57088 247 aa13.71□□□□□ -0.21
SHOX-201ENST00000334060 PRB3Q04118 309 aaPredicted RBP13.71□□□□□ -0.21
SHOX-201ENST00000334060 EDDM3AQ14507 147 aa13.71□□□□□ -0.21
SHOX-201ENST00000334060 TATDN3Q17R31 274 aa13.71□□□□□ -0.21
SHOX-201ENST00000334060 NHLRC3Q5JS37 347 aa13.71□□□□□ -0.21
SHOX-201ENST00000334060 TRIQKQ629K1 86 aa13.71□□□□□ -0.21
SHOX-201ENST00000334060 RAB12Q6IQ22 244 aa13.71□□□□□ -0.21
SHOX-201ENST00000334060 FAM53AQ6NSI3 398 aaPredicted RBP13.71□□□□□ -0.21
SHOX-201ENST00000334060 CLEC2AQ6UVW9 174 aa13.71□□□□□ -0.21
SHOX-201ENST00000334060 Q8IYB0 196 aa13.71□□□□□ -0.21
SHOX-201ENST00000334060 CHST4Q8NCG5 386 aa13.71□□□□□ -0.21
SHOX-201ENST00000334060 TMEM185AQ8NFB2 350 aa13.71□□□□□ -0.21
SHOX-201ENST00000334060 OR4M2Q8NGB6 313 aa13.71□□□□□ -0.21
SHOX-201ENST00000334060 OR10R2Q8NGX6 335 aa13.71□□□□□ -0.21
SHOX-201ENST00000334060 NUDCD2Q8WVJ2 157 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms