RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 LINC00587B1AMM8 73 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 PRSS44E7EML9 344 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 IGHEP01854 428 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 MT-ND4LP03901 98 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 EPHA1P21709 976 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 ATP6V0CP27449 155 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 FOXG1P55316 489 aaPredicted RBP10.6□□□□□ -0.71
VPS33B-201ENST00000333371 UCP2P55851 309 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 IL13RA2Q14627 380 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 GPR157Q5UAW9 335 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 ZNF818PQ6ZRF7 136 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 OR2C3Q8N628 320 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 INTS12Q96CB8 462 aaKnown RBP10.6□□□□□ -0.71
VPS33B-201ENST00000333371 SYT3Q9BQG1 590 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 KCNJ16Q9NPI9 418 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 GLRX2Q9NS18 164 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 DEPPQ9NTK1 212 aa10.6□□□□□ -0.71
VPS33B-201ENST00000333371 PINLYPA6NC86 204 aa10.59□□□□□ -0.71
VPS33B-201ENST00000333371 ZNF727A8MUV8 499 aa10.59□□□□□ -0.71
VPS33B-201ENST00000333371 K7N7A8 449 aa10.59□□□□□ -0.71
VPS33B-201ENST00000333371 HSD17B6O14756 317 aa10.59□□□□□ -0.71
VPS33B-201ENST00000333371 ADAM20O43506 726 aa10.59□□□□□ -0.71
VPS33B-201ENST00000333371 TMEM50AO95807 157 aa10.59□□□□□ -0.71
VPS33B-201ENST00000333371 RAB5AP20339 215 aa10.59□□□□□ -0.71
VPS33B-201ENST00000333371 AGAP20933 346 aa10.59□□□□□ -0.71
VPS33B-201ENST00000333371 FUT3P21217 361 aa10.59□□□□□ -0.71
VPS33B-201ENST00000333371 FUT6P51993 359 aa10.59□□□□□ -0.71
VPS33B-201ENST00000333371 Q0VFX4 171 aa10.59□□□□□ -0.71
VPS33B-201ENST00000333371 GNMTQ14749 295 aa10.59□□□□□ -0.71
VPS33B-201ENST00000333371 ODF3L1Q8IXM7 274 aa10.59□□□□□ -0.71
VPS33B-201ENST00000333371 OR2G3Q8NGZ4 309 aa10.59□□□□□ -0.71
VPS33B-201ENST00000333371 EXTL1Q92935 676 aa10.59□□□□□ -0.71
VPS33B-201ENST00000333371 GPR35Q9HC97 309 aa10.59□□□□□ -0.71
VPS33B-201ENST00000333371 ATPIF1Q9UII2 106 aa10.59□□□□□ -0.71
VPS33B-201ENST00000333371 UBE2J1Q9Y385 318 aaPredicted RBP10.59□□□□□ -0.71
VPS33B-201ENST00000333371 MED13Q9UHV7 2174 aa10.59□□□□□ -0.71
VPS33B-201ENST00000333371 LMO1P25800 156 aa10.59□□□□□ -0.71
VPS33B-201ENST00000333371 HERPUD1Q15011 391 aa10.59□□□□□ -0.71
VPS33B-201ENST00000333371 HAGHQ16775 308 aa10.59□□□□□ -0.71
VPS33B-201ENST00000333371 C6orf15Q6UXA7 325 aaPredicted RBP10.59□□□□□ -0.71
VPS33B-201ENST00000333371 GAPTQ8N292 157 aa10.59□□□□□ -0.71
VPS33B-201ENST00000333371 CPT1CQ8TCG5 803 aa10.59□□□□□ -0.71
VPS33B-201ENST00000333371 SLC35B3Q9H1N7 401 aa10.59□□□□□ -0.71
VPS33B-201ENST00000333371 DOCK11Q5JSL3 2073 aa10.58□□□□□ -0.72
VPS33B-201ENST00000333371 CACNA1DQ01668 2161 aa10.58□□□□□ -0.72
VPS33B-201ENST00000333371 PCSK5Q92824 1860 aa10.58□□□□□ -0.72
VPS33B-201ENST00000333371 PROB1E7EW31 1015 aa10.58□□□□□ -0.72
VPS33B-201ENST00000333371 TXNL1O43396 289 aa10.58□□□□□ -0.72
VPS33B-201ENST00000333371 JMJD7P0C870 316 aa10.58□□□□□ -0.72
VPS33B-201ENST00000333371 SP9P0CG40 484 aa10.58□□□□□ -0.72
VPS33B-201ENST00000333371 NKX2-1P43699 371 aaPredicted RBP10.58□□□□□ -0.72
VPS33B-201ENST00000333371 GPM6AP51674 278 aa10.58□□□□□ -0.72
VPS33B-201ENST00000333371 SRYQ05066 204 aa10.58□□□□□ -0.72
VPS33B-201ENST00000333371 IZUMO4Q1ZYL8 232 aa10.58□□□□□ -0.72
VPS33B-201ENST00000333371 OR56B2PQ8NGI1 322 aa10.58□□□□□ -0.72
VPS33B-201ENST00000333371 TMEM222Q9H0R3 208 aa10.58□□□□□ -0.72
VPS33B-201ENST00000333371 TCFL5Q9UL49 500 aa10.58□□□□□ -0.72
VPS33B-201ENST00000333371 TMED3Q9Y3Q3 217 aa10.58□□□□□ -0.72
VPS33B-201ENST00000333371 R4GN57 208 aa10.58□□□□□ -0.72
VPS33B-201ENST00000333371 ZNF816-ZNF321PA0A0X1KG74 233 aa10.58□□□□□ -0.72
VPS33B-201ENST00000333371 LRRC3CA6NJW4 275 aa10.58□□□□□ -0.72
VPS33B-201ENST00000333371 TRDCB7Z8K6 153 aa10.58□□□□□ -0.72
VPS33B-201ENST00000333371 UBE2CO00762 179 aa10.58□□□□□ -0.72
VPS33B-201ENST00000333371 P04436 131 aa10.58□□□□□ -0.72
VPS33B-201ENST00000333371 ZNF883P0CG24 379 aa10.58□□□□□ -0.72
VPS33B-201ENST00000333371 HAAOP46952 286 aa10.58□□□□□ -0.72
VPS33B-201ENST00000333371 OR8B8Q15620 311 aa10.58□□□□□ -0.72
VPS33B-201ENST00000333371 KRTAP27-1Q3LI81 207 aa10.58□□□□□ -0.72
VPS33B-201ENST00000333371 ZNF695Q8IW36 515 aa10.58□□□□□ -0.72
VPS33B-201ENST00000333371 ZNF561Q8N587 486 aa10.58□□□□□ -0.72
VPS33B-201ENST00000333371 ZNF565Q8N9K5 539 aa10.58□□□□□ -0.72
VPS33B-201ENST00000333371 OR5C1Q8NGR4 320 aa10.58□□□□□ -0.72
VPS33B-201ENST00000333371 LILRB1Q8NHL6 650 aaPredicted RBP10.58□□□□□ -0.72
VPS33B-201ENST00000333371 SF3B5Q9BWJ5 86 aaKnown RBP10.58□□□□□ -0.72
VPS33B-201ENST00000333371 C11orf1Q9H5F2 150 aa10.58□□□□□ -0.72
VPS33B-201ENST00000333371 H3BP45 60 aa10.57□□□□□ -0.72
VPS33B-201ENST00000333371 OR8U8P0C7N1 319 aa10.57□□□□□ -0.72
VPS33B-201ENST00000333371 PAX6P26367 422 aa10.57□□□□□ -0.72
VPS33B-201ENST00000333371 HMGN3Q15651 99 aa10.57□□□□□ -0.72
VPS33B-201ENST00000333371 NCMAPQ5T1S8 102 aa10.57□□□□□ -0.72
VPS33B-201ENST00000333371 SPSB3Q6PJ21 355 aa10.57□□□□□ -0.72
VPS33B-201ENST00000333371 DPPA2Q7Z7J5 298 aa10.57□□□□□ -0.72
VPS33B-201ENST00000333371 MYPOPQ86VE0 399 aaPredicted RBP10.57□□□□□ -0.72
VPS33B-201ENST00000333371 SELENOHQ8IZQ5 122 aaKnown RBP10.57□□□□□ -0.72
VPS33B-201ENST00000333371 CCDC71LQ8N9Z2 235 aa10.57□□□□□ -0.72
VPS33B-201ENST00000333371 CCDC54Q8NEL0 328 aa10.57□□□□□ -0.72
VPS33B-201ENST00000333371 CT55Q8WUE5 264 aa10.57□□□□□ -0.72
VPS33B-201ENST00000333371 ZNF488Q96MN9 340 aa10.57□□□□□ -0.72
VPS33B-201ENST00000333371 NIT2Q9NQR4 276 aa10.57□□□□□ -0.72
VPS33B-201ENST00000333371 CCL28Q9NRJ3 127 aa10.57□□□□□ -0.72
VPS33B-201ENST00000333371 PARPBPQ9NWS1 579 aa10.57□□□□□ -0.72
VPS33B-201ENST00000333371 MMP24Q9Y5R2 645 aa10.57□□□□□ -0.72
VPS33B-201ENST00000333371 LIPGQ9Y5X9 500 aa10.57□□□□□ -0.72
VPS33B-201ENST00000333371 ZNF503-AS2A6NEH8 195 aa10.57□□□□□ -0.72
VPS33B-201ENST00000333371 MMP7P09237 267 aaPredicted RBP10.57□□□□□ -0.72
VPS33B-201ENST00000333371 SRD5A2P31213 254 aa10.57□□□□□ -0.72
VPS33B-201ENST00000333371 DYNLT3P51808 116 aa10.57□□□□□ -0.72
VPS33B-201ENST00000333371 UCP3P55916 312 aa10.57□□□□□ -0.72
VPS33B-201ENST00000333371 RPS23P62266 143 aaKnown RBP10.57□□□□□ -0.72
VPS33B-201ENST00000333371 PPP1R32Q7Z5V6 425 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms