RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 A0A1B0GV50 99 aa13.63□□□□□ -0.23
PDGFB-201ENST00000331163 BCL3P20749 454 aa13.63□□□□□ -0.23
PDGFB-201ENST00000331163 TLE1Q04724 770 aa13.63□□□□□ -0.23
PDGFB-201ENST00000331163 ETV3LQ6ZN32 361 aa13.63□□□□□ -0.23
PDGFB-201ENST00000331163 LINC00469Q8N7U9 141 aa13.63□□□□□ -0.23
PDGFB-201ENST00000331163 PHYHIPQ92561 330 aa13.63□□□□□ -0.23
PDGFB-201ENST00000331163 MBD2Q9UBB5 411 aa13.63□□□□□ -0.23
PDGFB-201ENST00000331163 RAB22AQ9UL26 194 aa13.63□□□□□ -0.23
PDGFB-201ENST00000331163 RAB19A4D1S5 217 aa13.63□□□□□ -0.23
PDGFB-201ENST00000331163 H7C417 338 aa13.63□□□□□ -0.23
PDGFB-201ENST00000331163 EIF3GO75821 320 aaKnown RBP eCLIP13.63□□□□□ -0.23
PDGFB-201ENST00000331163 MPPED2Q15777 294 aa13.63□□□□□ -0.23
PDGFB-201ENST00000331163 AVPI1Q5T686 147 aa13.63□□□□□ -0.23
PDGFB-201ENST00000331163 RXFP4Q8TDU9 374 aa13.63□□□□□ -0.23
PDGFB-201ENST00000331163 DCUN1D4Q92564 292 aa13.63□□□□□ -0.23
PDGFB-201ENST00000331163 PRR13Q9NZ81 148 aa13.63□□□□□ -0.23
PDGFB-201ENST00000331163 MTFP1Q9UDX5 166 aa13.63□□□□□ -0.23
PDGFB-201ENST00000331163 FABP1P07148 127 aa13.63□□□□□ -0.23
PDGFB-201ENST00000331163 CSF1P09603 554 aa13.63□□□□□ -0.23
PDGFB-201ENST00000331163 GLRA1P23415 457 aa13.63□□□□□ -0.23
PDGFB-201ENST00000331163 TMEM108Q6UXF1 575 aa13.63□□□□□ -0.23
PDGFB-201ENST00000331163 GTF3AQ92664 365 aaKnown RBP13.63□□□□□ -0.23
PDGFB-201ENST00000331163 NEUROG1Q92886 237 aa13.63□□□□□ -0.23
PDGFB-201ENST00000331163 TMEM45BQ96B21 275 aa13.63□□□□□ -0.23
PDGFB-201ENST00000331163 C20orf24Q9BUV8 137 aa13.63□□□□□ -0.23
PDGFB-201ENST00000331163 SLC17A5Q9NRA2 495 aa13.63□□□□□ -0.23
PDGFB-201ENST00000331163 MED9Q9NWA0 146 aa13.63□□□□□ -0.23
PDGFB-201ENST00000331163 WNT9BO14905 357 aa13.62□□□□□ -0.23
PDGFB-201ENST00000331163 MMP7P09237 267 aaPredicted RBP13.62□□□□□ -0.23
PDGFB-201ENST00000331163 DHODHQ02127 395 aa13.62□□□□□ -0.23
PDGFB-201ENST00000331163 KRBOX4Q5JUW0 171 aa13.62□□□□□ -0.23
PDGFB-201ENST00000331163 SEM1Q6ZVN7 128 aa13.62□□□□□ -0.23
PDGFB-201ENST00000331163 POM121L2Q96KW2 1035 aa13.62□□□□□ -0.23
PDGFB-201ENST00000331163 CHST5Q9GZS9 411 aa13.62□□□□□ -0.23
PDGFB-201ENST00000331163 KCNS2Q9ULS6 477 aa13.62□□□□□ -0.23
PDGFB-201ENST00000331163 VSTM5A8MXK1 200 aa13.62□□□□□ -0.23
PDGFB-201ENST00000331163 TNFSF13O75888 250 aa13.62□□□□□ -0.23
PDGFB-201ENST00000331163 CPT2P23786 658 aa13.62□□□□□ -0.23
PDGFB-201ENST00000331163 THBS4P35443 961 aa13.62□□□□□ -0.23
PDGFB-201ENST00000331163 PPT1P50897 306 aa13.62□□□□□ -0.23
PDGFB-201ENST00000331163 GABRG1Q8N1C3 465 aa13.62□□□□□ -0.23
PDGFB-201ENST00000331163 CNTNAP3BQ96NU0 1288 aa13.62□□□□□ -0.23
PDGFB-201ENST00000331163 FAM234AQ9H0X4 552 aa13.62□□□□□ -0.23
PDGFB-201ENST00000331163 SS18L1O75177 396 aaPredicted RBP13.62□□□□□ -0.23
PDGFB-201ENST00000331163 HRH1P35367 487 aa13.62□□□□□ -0.23
PDGFB-201ENST00000331163 PSG7Q13046 419 aa13.62□□□□□ -0.23
PDGFB-201ENST00000331163 IGFL3Q6UXB1 125 aa13.62□□□□□ -0.23
PDGFB-201ENST00000331163 OR5H2Q8NGV7 314 aa13.62□□□□□ -0.23
PDGFB-201ENST00000331163 RSRP1Q9BUV0 290 aa13.62□□□□□ -0.23
PDGFB-201ENST00000331163 PIGMQ9H3S5 423 aa13.62□□□□□ -0.23
PDGFB-201ENST00000331163 DECR2Q9NUI1 292 aa13.62□□□□□ -0.23
PDGFB-201ENST00000331163 A0A0D9SG52 128 aa13.61□□□□□ -0.23
PDGFB-201ENST00000331163 TEX13DA0A0J9YY54 714 aaPredicted RBP13.61□□□□□ -0.23
PDGFB-201ENST00000331163 DHRS2Q13268 280 aa13.61□□□□□ -0.23
PDGFB-201ENST00000331163 MOGAT3Q86VF5 341 aa13.61□□□□□ -0.23
PDGFB-201ENST00000331163 C14orf79Q96F83 325 aa13.61□□□□□ -0.23
PDGFB-201ENST00000331163 TRBV5-7A0A0A0MS05 114 aa13.61□□□□□ -0.23
PDGFB-201ENST00000331163 ASPHD2Q6ICH7 369 aa13.61□□□□□ -0.23
PDGFB-201ENST00000331163 IGFL2Q6UWQ7 119 aa13.61□□□□□ -0.23
PDGFB-201ENST00000331163 OR56B1Q8NGI3 324 aa13.61□□□□□ -0.23
PDGFB-201ENST00000331163 GPHA2Q96T91 129 aa13.61□□□□□ -0.23
PDGFB-201ENST00000331163 GSKIPQ9P0R6 139 aa13.61□□□□□ -0.23
PDGFB-201ENST00000331163 CEACAM4O75871 244 aa13.6□□□□□ -0.23
PDGFB-201ENST00000331163 IL13RA1P78552 427 aa13.6□□□□□ -0.23
PDGFB-201ENST00000331163 P2RY6Q15077 328 aa13.6□□□□□ -0.23
PDGFB-201ENST00000331163 UNQ9370/PRO34162Q6UXP9 181 aa13.6□□□□□ -0.23
PDGFB-201ENST00000331163 C22orf34Q6ZV56 151 aa13.6□□□□□ -0.23
PDGFB-201ENST00000331163 STOML3Q8TAV4 291 aa13.6□□□□□ -0.23
PDGFB-201ENST00000331163 CNTNAP3Q9BZ76 1288 aa13.6□□□□□ -0.23
PDGFB-201ENST00000331163 ZNF391Q9UJN7 358 aa13.6□□□□□ -0.23
PDGFB-201ENST00000331163 TRAPPC2LQ9UL33 140 aa13.6□□□□□ -0.23
PDGFB-201ENST00000331163 HSPB2A8KAH6 182 aa13.6□□□□□ -0.23
PDGFB-201ENST00000331163 IRF2P14316 349 aa13.6□□□□□ -0.23
PDGFB-201ENST00000331163 ADCYAP1P18509 176 aa13.6□□□□□ -0.23
PDGFB-201ENST00000331163 FUT6P51993 359 aa13.6□□□□□ -0.23
PDGFB-201ENST00000331163 POLR2GP62487 172 aaKnown RBP eCLIP13.6□□□□□ -0.23
PDGFB-201ENST00000331163 MRPS10P82664 201 aaKnown RBP13.6□□□□□ -0.23
PDGFB-201ENST00000331163 HSPB2Q16082 182 aa13.6□□□□□ -0.23
PDGFB-201ENST00000331163 RTL8AQ9BWD3 113 aa13.6□□□□□ -0.23
PDGFB-201ENST00000331163 LINC00470Q9BZP3 86 aa13.6□□□□□ -0.23
PDGFB-201ENST00000331163 C1orf123Q9NWV4 160 aa13.6□□□□□ -0.23
PDGFB-201ENST00000331163 COL5A1P20908 1838 aaPredicted RBP13.6□□□□□ -0.23
PDGFB-201ENST00000331163 LRBAP50851 2863 aa13.6□□□□□ -0.23
PDGFB-201ENST00000331163 F8VVB4 439 aa13.6□□□□□ -0.23
PDGFB-201ENST00000331163 F8VWA3 439 aa13.6□□□□□ -0.23
PDGFB-201ENST00000331163 DEGS1O15121 323 aa13.6□□□□□ -0.23
PDGFB-201ENST00000331163 XRCC3O43542 346 aa13.6□□□□□ -0.23
PDGFB-201ENST00000331163 FBXO24O75426 580 aa13.6□□□□□ -0.23
PDGFB-201ENST00000331163 RBMXL2O75526 392 aaKnown RBP13.6□□□□□ -0.23
PDGFB-201ENST00000331163 LY6HO94772 140 aa13.6□□□□□ -0.23
PDGFB-201ENST00000331163 CNOT4O95628 575 aaKnown RBP13.6□□□□□ -0.23
PDGFB-201ENST00000331163 KLF3P57682 345 aaPredicted RBP13.6□□□□□ -0.23
PDGFB-201ENST00000331163 BSPH1Q075Z2 132 aa13.6□□□□□ -0.23
PDGFB-201ENST00000331163 C11orf87Q6NUJ2 197 aa13.6□□□□□ -0.23
PDGFB-201ENST00000331163 IGF2-ASQ6U949 168 aa13.6□□□□□ -0.23
PDGFB-201ENST00000331163 OSR2Q8N2R0 312 aa13.6□□□□□ -0.23
PDGFB-201ENST00000331163 H1FXQ92522 213 aaKnown RBP13.6□□□□□ -0.23
PDGFB-201ENST00000331163 RNF166Q96A37 237 aaPredicted RBP13.6□□□□□ -0.23
PDGFB-201ENST00000331163 ISOC2Q96AB3 205 aa13.6□□□□□ -0.23
PDGFB-201ENST00000331163 ERRFI1Q9UJM3 462 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms