RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 NOXO1Q8NFA2 376 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 SMOC1Q9H4F8 434 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 FSCN3Q9NQT6 498 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 MS4A18H0YCH9 400 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 ADAP1O75689 374 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 FUT3P21217 361 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 FUT7Q11130 342 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 MS4A18Q3C1V0 323 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 TBC1D26Q86UD7 250 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 WFDC3Q8IUB2 231 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 OR2C3Q8N628 320 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 GNRHR2Q96P88 292 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 CNTD2Q9H8S5 307 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 CBLN4Q9NTU7 201 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 MPZL1O95297 269 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 RBM11P57052 281 aaKnown RBP7.02□□□□□ -1.29
CIITA-201ENST00000324288 MRGPRDQ8TDS7 321 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 BEX4Q9NWD9 120 aaPredicted RBP7.02□□□□□ -1.29
CIITA-201ENST00000324288 MMP17Q9ULZ9 603 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 VMA21Q3ZAQ7 101 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 ZNF343Q6P1L6 599 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 ATOH7Q8N100 152 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 SYS1Q8N2H4 156 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 ZNF502Q8TBZ5 544 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 VSIG4Q9Y279 399 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 B4E171 279 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 SNRPCP09234 159 aaKnown RBP7.02□□□□□ -1.29
CIITA-201ENST00000324288 SBK3P0C264 359 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 SLC6A1P30531 599 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 BSGP35613 385 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 SMAD4Q13485 552 aaKnown RBP7.02□□□□□ -1.29
CIITA-201ENST00000324288 SPICQ8N5J4 248 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 OR10A7Q8NGE5 316 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 OR1N2Q8NGR9 330 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 MYEOVQ96EZ4 313 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 GPA33Q99795 319 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 UBTD1Q9HAC8 227 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 PCOLCE2Q9UKZ9 415 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 IGHV3-21A0A0B4J1V1 117 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 GAGE10A6NGK3 116 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 HMSDA8MTL9 139 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 SNURFLB1AK76 121 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 SRSF10O75494 262 aaKnown RBP7.02□□□□□ -1.29
CIITA-201ENST00000324288 SOD3P08294 240 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 PATE4P0C8F1 98 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 METAP1P53582 386 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 UBE2L3P68036 154 aaKnown RBP7.02□□□□□ -1.29
CIITA-201ENST00000324288 RNFT1Q5M7Z0 435 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 RSPO2Q6UXX9 243 aaPredicted RBP7.02□□□□□ -1.29
CIITA-201ENST00000324288 C6orf201Q7Z4U5 140 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 OR11H7Q8NGC8 314 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 OR4C3Q8NH37 302 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 EAF1Q96JC9 268 aaPredicted RBP7.02□□□□□ -1.29
CIITA-201ENST00000324288 OR2J1Q9GZK6 312 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 ZNF766Q5HY98 468 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 MKRN2OSH3BPM6 223 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 EIF3GO75821 320 aaKnown RBP eCLIP7.02□□□□□ -1.29
CIITA-201ENST00000324288 TMEM33P57088 247 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 DUSP8Q13202 625 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 MORN4Q8NDC4 146 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 OR4D9Q8NGE8 314 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 ZNF646O15015 1829 aaPredicted RBP7.02□□□□□ -1.29
CIITA-201ENST00000324288 EML6Q6ZMW3 1958 aa7.02□□□□□ -1.29
CIITA-201ENST00000324288 CTAG2O75638 210 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 GABRA1P14867 456 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 SLC25A1P53007 311 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 ZNF738Q8NE65 137 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 C17orf47Q8NEP4 570 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 OR2V1Q8NHB1 315 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 H3BQ15 152 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 K7ESF4 209 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 HLA-BQ31612 363 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 CYB561D1Q8N8Q1 229 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 CRYGNQ8WXF5 182 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 ST8SIA1Q92185 356 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 ELSPBP1Q96BH3 223 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 MRGPRX1Q96LB2 322 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 ERVH48-1M5A8F1 160 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 INHBBP09529 407 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 TMEM128Q5BJH2 165 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 PRNTQ86SH4 94 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 WDFY1Q8IWB7 410 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 SFTPA2Q8IWL1 248 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 SFTPA1Q8IWL2 248 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 RAB40CQ96S21 281 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 MPLP40238 635 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 ZNF628Q5EBL2 1059 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 GMPPAQ96IJ6 420 aaPredicted RBP7.01□□□□□ -1.29
CIITA-201ENST00000324288 ABHD1Q96SE0 405 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 BDP1A6H8Y1 2624 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 OR2T8A6NH00 312 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 RER1O15258 196 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 OR3A1P47881 315 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 TTC32Q5I0X7 151 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 DMRTA1Q5VZB9 504 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 CST9Q5W186 159 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 LRRC75AQ8NAA5 344 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 ZNF784Q8NCA9 323 aaPredicted RBP7.01□□□□□ -1.29
CIITA-201ENST00000324288 TMED3Q9Y3Q3 217 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 FUT6P51993 359 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms