RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 SLC35G3Q8N808 338 aa17.6■□□□□ 0.41
TTC39C-202ENST00000317571 TREM1Q9NP99 234 aa17.6■□□□□ 0.41
TTC39C-202ENST00000317571 CACNA1HO95180 2353 aa17.6■□□□□ 0.41
TTC39C-202ENST00000317571 A0A1W2PR80 420 aa17.6■□□□□ 0.41
TTC39C-202ENST00000317571 TRAPPC2LH3BP13 241 aa17.6■□□□□ 0.41
TTC39C-202ENST00000317571 RHBDL1O75783 438 aa17.6■□□□□ 0.41
TTC39C-202ENST00000317571 H2AFB1P0C5Y9 115 aa17.6■□□□□ 0.41
TTC39C-202ENST00000317571 MEX3BQ6ZN04 569 aaKnown RBP17.6■□□□□ 0.41
TTC39C-202ENST00000317571 SMIM8Q96KF7 97 aa17.6■□□□□ 0.41
TTC39C-202ENST00000317571 PRRC2CQ9Y520 2896 aaKnown RBP17.59■□□□□ 0.41
TTC39C-202ENST00000317571 CFAP47Q6ZTR5 3102 aa17.59■□□□□ 0.41
TTC39C-202ENST00000317571 TAAR5O14804 337 aa17.59■□□□□ 0.41
TTC39C-202ENST00000317571 APLNRP35414 380 aa17.59■□□□□ 0.41
TTC39C-202ENST00000317571 ZNF818PQ6ZRF7 136 aa17.59■□□□□ 0.41
TTC39C-202ENST00000317571 HRH4Q9H3N8 390 aa17.59■□□□□ 0.41
TTC39C-202ENST00000317571 WFDC1Q9HC57 220 aa17.59■□□□□ 0.41
TTC39C-202ENST00000317571 CARHSP1Q9Y2V2 147 aaKnown RBP17.59■□□□□ 0.41
TTC39C-202ENST00000317571 MPPED1O15442 326 aa17.59■□□□□ 0.41
TTC39C-202ENST00000317571 FBXO24O75426 580 aa17.59■□□□□ 0.41
TTC39C-202ENST00000317571 ID4P47928 161 aa17.59■□□□□ 0.41
TTC39C-202ENST00000317571 FLI1Q01543 452 aaPredicted RBP17.59■□□□□ 0.41
TTC39C-202ENST00000317571 PJVKQ0ZLH3 352 aa17.59■□□□□ 0.41
TTC39C-202ENST00000317571 MPV17LQ2QL34 196 aa17.59■□□□□ 0.41
TTC39C-202ENST00000317571 LGI3Q8N145 548 aa17.59■□□□□ 0.41
TTC39C-202ENST00000317571 TRAV24A0A0B4J272 114 aa17.58■□□□□ 0.41
TTC39C-202ENST00000317571 NUDT19A8MXV4 375 aa17.58■□□□□ 0.41
TTC39C-202ENST00000317571 NKX2-8O15522 239 aa17.58■□□□□ 0.41
TTC39C-202ENST00000317571 CA6P23280 308 aa17.58■□□□□ 0.41
TTC39C-202ENST00000317571 SMCO1Q147U7 214 aa17.58■□□□□ 0.41
TTC39C-202ENST00000317571 HFEQ30201 348 aa17.58■□□□□ 0.41
TTC39C-202ENST00000317571 WDR86Q86TI4 376 aa17.58■□□□□ 0.41
TTC39C-202ENST00000317571 MKXQ8IYA7 352 aa17.58■□□□□ 0.41
TTC39C-202ENST00000317571 SUMF2Q8NBJ7 301 aa17.58■□□□□ 0.41
TTC39C-202ENST00000317571 DMBX1Q8NFW5 382 aa17.58■□□□□ 0.41
TTC39C-202ENST00000317571 OR10Z1Q8NGY1 313 aa17.58■□□□□ 0.41
TTC39C-202ENST00000317571 MRPL30Q8TCC3 161 aaKnown RBP17.58■□□□□ 0.41
TTC39C-202ENST00000317571 UQCC1Q9NVA1 299 aa17.58■□□□□ 0.41
TTC39C-202ENST00000317571 PRELID3BQ9Y3B1 194 aa17.58■□□□□ 0.41
TTC39C-202ENST00000317571 FAM96BQ9Y3D0 163 aa17.58■□□□□ 0.41
TTC39C-202ENST00000317571 TTC28Q96AY4 2481 aa17.58■□□□□ 0.4
TTC39C-202ENST00000317571 C3orf85A0A1B0GTC6 90 aa17.58■□□□□ 0.4
TTC39C-202ENST00000317571 IL34Q6ZMJ4 242 aa17.58■□□□□ 0.4
TTC39C-202ENST00000317571 SECTM1Q8WVN6 248 aa17.58■□□□□ 0.4
TTC39C-202ENST00000317571 SYT3Q9BQG1 590 aa17.58■□□□□ 0.4
TTC39C-202ENST00000317571 TUSC2O75896 110 aa17.57■□□□□ 0.4
TTC39C-202ENST00000317571 NPBWR1P48145 328 aa17.57■□□□□ 0.4
TTC39C-202ENST00000317571 TNFSF10P50591 281 aa17.57■□□□□ 0.4
TTC39C-202ENST00000317571 ERVS71-1P61550 626 aa17.57■□□□□ 0.4
TTC39C-202ENST00000317571 TBC1D26Q86UD7 250 aa17.57■□□□□ 0.4
TTC39C-202ENST00000317571 OR4D5Q8NGN0 318 aa17.57■□□□□ 0.4
TTC39C-202ENST00000317571 SAV1Q9H4B6 383 aaPredicted RBP17.57■□□□□ 0.4
TTC39C-202ENST00000317571 NDRG3Q9UGV2 375 aa17.57■□□□□ 0.4
TTC39C-202ENST00000317571 ANKRD30BLA7E2S9 258 aa17.57■□□□□ 0.4
TTC39C-202ENST00000317571 GAPDHP04406 335 aaKnown RBP17.57■□□□□ 0.4
TTC39C-202ENST00000317571 WT1P19544 449 aaPredicted RBP17.57■□□□□ 0.4
TTC39C-202ENST00000317571 SRSF7Q16629 238 aaKnown RBP eCLIP17.57■□□□□ 0.4
TTC39C-202ENST00000317571 GAPTQ8N292 157 aa17.57■□□□□ 0.4
TTC39C-202ENST00000317571 CCDC71LQ8N9Z2 235 aa17.57■□□□□ 0.4
TTC39C-202ENST00000317571 NEK7Q8TDX7 302 aa17.57■□□□□ 0.4
TTC39C-202ENST00000317571 RDH5Q92781 318 aa17.57■□□□□ 0.4
TTC39C-202ENST00000317571 RCL1Q9Y2P8 373 aaKnown RBP17.57■□□□□ 0.4
TTC39C-202ENST00000317571 NKX2-6A6NCS4 301 aa17.56■□□□□ 0.4
TTC39C-202ENST00000317571 E5RGE8 158 aa17.56■□□□□ 0.4
TTC39C-202ENST00000317571 H7C2Y5 167 aa17.56■□□□□ 0.4
TTC39C-202ENST00000317571 SULT1A2P50226 295 aa17.56■□□□□ 0.4
TTC39C-202ENST00000317571 PCSK4Q6UW60 755 aa17.56■□□□□ 0.4
TTC39C-202ENST00000317571 FBXW12Q6X9E4 464 aa17.56■□□□□ 0.4
TTC39C-202ENST00000317571 DPPA2Q7Z7J5 298 aa17.56■□□□□ 0.4
TTC39C-202ENST00000317571 GCNT2Q8N0V5 402 aa17.56■□□□□ 0.4
TTC39C-202ENST00000317571 HIST1H2AAQ96QV6 131 aa17.56■□□□□ 0.4
TTC39C-202ENST00000317571 TMEM222Q9H0R3 208 aa17.56■□□□□ 0.4
TTC39C-202ENST00000317571 OR51I2Q9H344 312 aa17.56■□□□□ 0.4
TTC39C-202ENST00000317571 OPA3Q9H6K4 179 aa17.56■□□□□ 0.4
TTC39C-202ENST00000317571 RHOFQ9HBH0 211 aa17.56■□□□□ 0.4
TTC39C-202ENST00000317571 NSG2Q9Y328 171 aa17.56■□□□□ 0.4
TTC39C-202ENST00000317571 MPC1Q9Y5U8 109 aa17.56■□□□□ 0.4
TTC39C-202ENST00000317571 HS3ST1O14792 307 aa17.56■□□□□ 0.4
TTC39C-202ENST00000317571 MED6O75586 246 aa17.56■□□□□ 0.4
TTC39C-202ENST00000317571 MUC1P15941 1255 aaPredicted RBP17.56■□□□□ 0.4
TTC39C-202ENST00000317571 ZNF14P17017 642 aaPredicted RBP17.56■□□□□ 0.4
TTC39C-202ENST00000317571 GNG3P63215 75 aa17.56■□□□□ 0.4
TTC39C-202ENST00000317571 DHRS7BQ6IAN0 325 aaPredicted RBP17.56■□□□□ 0.4
TTC39C-202ENST00000317571 LILRB1Q8NHL6 650 aaPredicted RBP17.56■□□□□ 0.4
TTC39C-202ENST00000317571 PLEKHA2Q9HB19 425 aa17.56■□□□□ 0.4
TTC39C-202ENST00000317571 FAM86C1Q9NVL1 165 aa17.56■□□□□ 0.4
TTC39C-202ENST00000317571 ATP23Q9Y6H3 246 aa17.56■□□□□ 0.4
TTC39C-202ENST00000317571 TRDCB7Z8K6 153 aa17.55■□□□□ 0.4
TTC39C-202ENST00000317571 SOX8P57073 446 aa17.55■□□□□ 0.4
TTC39C-202ENST00000317571 ALKBH6Q3KRA9 238 aa17.55■□□□□ 0.4
TTC39C-202ENST00000317571 PIP4P1Q86T03 277 aa17.55■□□□□ 0.4
TTC39C-202ENST00000317571 SAT2Q96F10 170 aaPredicted RBP17.55■□□□□ 0.4
TTC39C-202ENST00000317571 SEC11CQ9BY50 192 aa17.55■□□□□ 0.4
TTC39C-202ENST00000317571 C11orf1Q9H5F2 150 aa17.55■□□□□ 0.4
TTC39C-202ENST00000317571 PARD6AQ9NPB6 346 aa17.55■□□□□ 0.4
TTC39C-202ENST00000317571 CCL28Q9NRJ3 127 aa17.55■□□□□ 0.4
TTC39C-202ENST00000317571 IGHV1-2P23083 117 aa17.55■□□□□ 0.4
TTC39C-202ENST00000317571 IL24Q13007 206 aa17.55■□□□□ 0.4
TTC39C-202ENST00000317571 SUMF1Q8NBK3 374 aa17.55■□□□□ 0.4
TTC39C-202ENST00000317571 NRIP2Q9BQI9 281 aa17.55■□□□□ 0.4
TTC39C-202ENST00000317571 ARV1Q9H2C2 271 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms