RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 DUXBA0A1W2PPF3 345 aa11.86□□□□□ -0.51
VAMP2-201ENST00000316509 DLL1O00548 723 aa11.86□□□□□ -0.51
VAMP2-201ENST00000316509 MPPED1O15442 326 aa11.86□□□□□ -0.51
VAMP2-201ENST00000316509 ZNHIT1O43257 154 aa11.86□□□□□ -0.51
VAMP2-201ENST00000316509 PGA5P0DJD9 388 aa11.86□□□□□ -0.51
VAMP2-201ENST00000316509 TIMP3P35625 211 aa11.86□□□□□ -0.51
VAMP2-201ENST00000316509 RAB32Q13637 225 aa11.86□□□□□ -0.51
VAMP2-201ENST00000316509 ZNF718Q3SXZ3 478 aa11.86□□□□□ -0.51
VAMP2-201ENST00000316509 PAN3Q58A45 887 aaKnown RBP11.86□□□□□ -0.51
VAMP2-201ENST00000316509 SPATA46Q5T0L3 261 aa11.86□□□□□ -0.51
VAMP2-201ENST00000316509 HSD17B13Q7Z5P4 300 aaPredicted RBP11.86□□□□□ -0.51
VAMP2-201ENST00000316509 MYPOPQ86VE0 399 aaPredicted RBP11.86□□□□□ -0.51
VAMP2-201ENST00000316509 ZNF610Q8N9Z0 462 aa11.86□□□□□ -0.51
VAMP2-201ENST00000316509 OR5T2Q8NGG2 359 aa11.86□□□□□ -0.51
VAMP2-201ENST00000316509 NRIP2Q9BQI9 281 aa11.86□□□□□ -0.51
VAMP2-201ENST00000316509 CXXC4Q9H2H0 198 aa11.86□□□□□ -0.51
VAMP2-201ENST00000316509 GSKIPQ9P0R6 139 aa11.86□□□□□ -0.51
VAMP2-201ENST00000316509 PURGQ9UJV8 347 aaKnown RBP11.86□□□□□ -0.51
VAMP2-201ENST00000316509 MFSD2BA6NFX1 497 aa11.85□□□□□ -0.51
VAMP2-201ENST00000316509 OR5H1A6NKK0 313 aa11.85□□□□□ -0.51
VAMP2-201ENST00000316509 NPIPB11E5RHQ5 1161 aa11.85□□□□□ -0.51
VAMP2-201ENST00000316509 GPR31O00270 319 aa11.85□□□□□ -0.51
VAMP2-201ENST00000316509 SH2D1BO14796 132 aa11.85□□□□□ -0.51
VAMP2-201ENST00000316509 KLK10O43240 276 aa11.85□□□□□ -0.51
VAMP2-201ENST00000316509 WISP2O76076 250 aa11.85□□□□□ -0.51
VAMP2-201ENST00000316509 OR5AC1P0C628 307 aa11.85□□□□□ -0.51
VAMP2-201ENST00000316509 S100GP29377 79 aa11.85□□□□□ -0.51
VAMP2-201ENST00000316509 LUMP51884 338 aaPredicted RBP11.85□□□□□ -0.51
VAMP2-201ENST00000316509 FOXF2Q12947 444 aa11.85□□□□□ -0.51
VAMP2-201ENST00000316509 IGSF11Q5DX21 431 aa11.85□□□□□ -0.51
VAMP2-201ENST00000316509 MBNL2Q5VZF2 373 aaKnown RBP11.85□□□□□ -0.51
VAMP2-201ENST00000316509 CXorf67Q86X51 503 aaPredicted RBP11.85□□□□□ -0.51
VAMP2-201ENST00000316509 GAPTQ8N292 157 aa11.85□□□□□ -0.51
VAMP2-201ENST00000316509 MSI2Q96DH6 328 aaKnown RBP11.85□□□□□ -0.51
VAMP2-201ENST00000316509 PLEKHA2Q9HB19 425 aa11.85□□□□□ -0.51
VAMP2-201ENST00000316509 MPTX1A8MV57 137 aa11.85□□□□□ -0.51
VAMP2-201ENST00000316509 WNT2P09544 360 aa11.85□□□□□ -0.51
VAMP2-201ENST00000316509 DUSP1P28562 367 aa11.85□□□□□ -0.51
VAMP2-201ENST00000316509 SNTB1Q13884 538 aaKnown RBP11.85□□□□□ -0.51
VAMP2-201ENST00000316509 C1orf185Q5T7R7 199 aa11.85□□□□□ -0.51
VAMP2-201ENST00000316509 CCDC28AQ8IWP9 274 aa11.85□□□□□ -0.51
VAMP2-201ENST00000316509 GLYATL2Q8WU03 294 aa11.85□□□□□ -0.51
VAMP2-201ENST00000316509 CABLES2Q9BTV7 478 aa11.85□□□□□ -0.51
VAMP2-201ENST00000316509 REG4Q9BYZ8 158 aa11.85□□□□□ -0.51
VAMP2-201ENST00000316509 SDHAF2Q9NX18 166 aa11.85□□□□□ -0.51
VAMP2-201ENST00000316509 PRR13Q9NZ81 148 aa11.85□□□□□ -0.51
VAMP2-201ENST00000316509 EP300Q09472 2414 aaPredicted RBP11.84□□□□□ -0.51
VAMP2-201ENST00000316509 C3orf85A0A1B0GTC6 90 aa11.84□□□□□ -0.51
VAMP2-201ENST00000316509 A0A1B0GWJ7 208 aa11.84□□□□□ -0.51
VAMP2-201ENST00000316509 A0A1W2PR80 420 aa11.84□□□□□ -0.51
VAMP2-201ENST00000316509 I3L521 148 aa11.84□□□□□ -0.51
VAMP2-201ENST00000316509 SCTP09683 121 aa11.84□□□□□ -0.51
VAMP2-201ENST00000316509 ZNF44P15621 663 aa11.84□□□□□ -0.51
VAMP2-201ENST00000316509 GNRHRP30968 328 aa11.84□□□□□ -0.51
VAMP2-201ENST00000316509 HLA-DRB3P79483 266 aa11.84□□□□□ -0.51
VAMP2-201ENST00000316509 TOR2AQ5JU69 321 aa11.84□□□□□ -0.51
VAMP2-201ENST00000316509 EIF5AL1Q6IS14 154 aaKnown RBP11.84□□□□□ -0.51
VAMP2-201ENST00000316509 BAP18Q8IXM2 172 aa11.84□□□□□ -0.51
VAMP2-201ENST00000316509 RBMXL3Q8N7X1 1067 aaKnown RBP11.84□□□□□ -0.51
VAMP2-201ENST00000316509 OR1S1Q8NH92 325 aa11.84□□□□□ -0.51
VAMP2-201ENST00000316509 TMEM56Q96MV1 263 aa11.84□□□□□ -0.51
VAMP2-201ENST00000316509 TLNRD1Q9H1K6 362 aa11.84□□□□□ -0.51
VAMP2-201ENST00000316509 SSUH2Q9Y2M2 353 aa11.84□□□□□ -0.51
VAMP2-201ENST00000316509 TMEM56-RWDD3S4R434 201 aa11.84□□□□□ -0.51
VAMP2-201ENST00000316509 MKRN2OSH3BPM6 223 aa11.84□□□□□ -0.51
VAMP2-201ENST00000316509 HS3ST1O14792 307 aa11.84□□□□□ -0.51
VAMP2-201ENST00000316509 DEDDO75618 318 aa11.84□□□□□ -0.51
VAMP2-201ENST00000316509 RHBDL1O75783 438 aa11.84□□□□□ -0.51
VAMP2-201ENST00000316509 GCH1P30793 250 aa11.84□□□□□ -0.51
VAMP2-201ENST00000316509 ZNF154Q13106 437 aa11.84□□□□□ -0.51
VAMP2-201ENST00000316509 PHLDA2Q53GA4 152 aa11.84□□□□□ -0.51
VAMP2-201ENST00000316509 BEX5Q5H9J7 111 aa11.84□□□□□ -0.51
VAMP2-201ENST00000316509 TIMM23BQ5SRD1 257 aa11.84□□□□□ -0.51
VAMP2-201ENST00000316509 SEM1Q6ZVN7 128 aa11.84□□□□□ -0.51
VAMP2-201ENST00000316509 WDR86Q86TI4 376 aa11.84□□□□□ -0.51
VAMP2-201ENST00000316509 CMTM1Q8IZ96 169 aa11.84□□□□□ -0.51
VAMP2-201ENST00000316509 BATF2Q8N1L9 274 aa11.84□□□□□ -0.51
VAMP2-201ENST00000316509 LILRB1Q8NHL6 650 aaPredicted RBP11.84□□□□□ -0.51
VAMP2-201ENST00000316509 IL22RA2Q969J5 263 aa11.84□□□□□ -0.51
VAMP2-201ENST00000316509 MRPL24Q96A35 216 aaKnown RBP11.84□□□□□ -0.51
VAMP2-201ENST00000316509 CCDC120Q96HB5 630 aa11.84□□□□□ -0.51
VAMP2-201ENST00000316509 ZNF488Q96MN9 340 aa11.84□□□□□ -0.51
VAMP2-201ENST00000316509 HES4Q9HCC6 221 aa11.84□□□□□ -0.51
VAMP2-201ENST00000316509 OR5AC2Q9NZP5 309 aa11.84□□□□□ -0.51
VAMP2-201ENST00000316509 IL36RNQ9UBH0 155 aa11.84□□□□□ -0.51
VAMP2-201ENST00000316509 SLC25A15Q9Y619 301 aa11.84□□□□□ -0.51
VAMP2-201ENST00000316509 MED12LQ86YW9 2145 aa11.83□□□□□ -0.52
VAMP2-201ENST00000316509 KRBOX1C9JBD0 128 aa11.83□□□□□ -0.52
VAMP2-201ENST00000316509 E5RGE8 158 aa11.83□□□□□ -0.52
VAMP2-201ENST00000316509 CDS2O95674 445 aa11.83□□□□□ -0.52
VAMP2-201ENST00000316509 CECR9P0C854 216 aa11.83□□□□□ -0.52
VAMP2-201ENST00000316509 LMO1P25800 156 aa11.83□□□□□ -0.52
VAMP2-201ENST00000316509 TSC22D1Q15714 1073 aa11.83□□□□□ -0.52
VAMP2-201ENST00000316509 RRNAD1Q96FB5 475 aaKnown RBP11.83□□□□□ -0.52
VAMP2-201ENST00000316509 ABHD14BQ96IU4 210 aa11.83□□□□□ -0.52
VAMP2-201ENST00000316509 KIRREL1Q96J84 757 aa11.83□□□□□ -0.52
VAMP2-201ENST00000316509 SPIN2AQ99865 258 aa11.83□□□□□ -0.52
VAMP2-201ENST00000316509 SPIN2BQ9BPZ2 258 aa11.83□□□□□ -0.52
VAMP2-201ENST00000316509 SFXN3Q9BWM7 321 aa11.83□□□□□ -0.52
VAMP2-201ENST00000316509 SLC5A7Q9GZV3 580 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms