RNA–Protein interactions for RNA: ENST00000315732.2

LSM10-201, Transcript of LSM10, U7 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM10, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM10-201ENST00000315732 RAB40BQ12829 278 aa11.73□□□□□ -0.53
LSM10-201ENST00000315732 ATXN7L3Q14CW9 347 aaPredicted RBP11.73□□□□□ -0.53
LSM10-201ENST00000315732 TCTEX1D4Q5JR98 221 aa11.73□□□□□ -0.53
LSM10-201ENST00000315732 ZNF691Q5VV52 312 aa11.73□□□□□ -0.53
LSM10-201ENST00000315732 ELP2Q6IA86 826 aa11.73□□□□□ -0.53
LSM10-201ENST00000315732 THNSL2Q86YJ6 484 aa11.73□□□□□ -0.53
LSM10-201ENST00000315732 C10orf67Q8IYJ2 551 aa11.73□□□□□ -0.53
LSM10-201ENST00000315732 PXT1Q8NFP0 134 aa11.73□□□□□ -0.53
LSM10-201ENST00000315732 OR51T1Q8NGJ9 327 aa11.73□□□□□ -0.53
LSM10-201ENST00000315732 OR9G1Q8NH87 305 aa11.73□□□□□ -0.53
LSM10-201ENST00000315732 RHOXF1Q8NHV9 184 aa11.73□□□□□ -0.53
LSM10-201ENST00000315732 DSCAML1Q8TD84 2053 aa11.73□□□□□ -0.53
LSM10-201ENST00000315732 HAVCR2Q8TDQ0 301 aa11.73□□□□□ -0.53
LSM10-201ENST00000315732 CPNE2Q96FN4 548 aaPredicted RBP11.73□□□□□ -0.53
LSM10-201ENST00000315732 NR1H4Q96RI1 486 aaPredicted RBP11.73□□□□□ -0.53
LSM10-201ENST00000315732 PCDHB16Q9NRJ7 776 aa11.73□□□□□ -0.53
LSM10-201ENST00000315732 ERVK13-1Q9NX77 482 aa11.73□□□□□ -0.53
LSM10-201ENST00000315732 DHDHQ9UQ10 334 aa11.73□□□□□ -0.53
LSM10-201ENST00000315732 E9PI62 339 aa11.72□□□□□ -0.53
LSM10-201ENST00000315732 AMY1AP04745 511 aa11.72□□□□□ -0.53
LSM10-201ENST00000315732 AMY2AP04746 511 aa11.72□□□□□ -0.53
LSM10-201ENST00000315732 CGB3P0DN86 165 aa11.72□□□□□ -0.53
LSM10-201ENST00000315732 CGB7P0DN87 165 aa11.72□□□□□ -0.53
LSM10-201ENST00000315732 RAB3AP20336 220 aa11.72□□□□□ -0.53
LSM10-201ENST00000315732 RBM39Q14498 530 aaKnown RBP11.72□□□□□ -0.53
LSM10-201ENST00000315732 FOXB2Q5VYV0 432 aa11.72□□□□□ -0.53
LSM10-201ENST00000315732 CCDC121Q6ZUS5 278 aa11.72□□□□□ -0.53
LSM10-201ENST00000315732 OR4X2Q8NGF9 303 aa11.72□□□□□ -0.53
LSM10-201ENST00000315732 MYDGFQ969H8 173 aa11.72□□□□□ -0.53
LSM10-201ENST00000315732 KIRREL1Q96J84 757 aa11.72□□□□□ -0.53
LSM10-201ENST00000315732 PDCD1LG2Q9BQ51 273 aa11.72□□□□□ -0.53
LSM10-201ENST00000315732 ZNF649Q9BS31 505 aa11.72□□□□□ -0.53
LSM10-201ENST00000315732 PPIL3Q9H2H8 161 aaKnown RBP11.72□□□□□ -0.53
LSM10-201ENST00000315732 LINC00574Q9H8X3 128 aa11.72□□□□□ -0.53
LSM10-201ENST00000315732 MRPS18AQ9NVS2 196 aaKnown RBP11.72□□□□□ -0.53
LSM10-201ENST00000315732 AURKAIP1Q9NWT8 199 aaPredicted RBP11.72□□□□□ -0.53
LSM10-201ENST00000315732 AMMECR1Q9Y4X0 333 aaPredicted RBP11.72□□□□□ -0.53
LSM10-201ENST00000315732 MEIKINA0A087WXM9 373 aa11.71□□□□□ -0.53
LSM10-201ENST00000315732 J3QR06 171 aa11.71□□□□□ -0.53
LSM10-201ENST00000315732 IGLL1P15814 213 aa11.71□□□□□ -0.53
LSM10-201ENST00000315732 KLHL22Q53GT1 634 aa11.71□□□□□ -0.53
LSM10-201ENST00000315732 PAN3Q58A45 887 aaKnown RBP11.71□□□□□ -0.53
LSM10-201ENST00000315732 SATL1Q86VE3 508 aa11.71□□□□□ -0.53
LSM10-201ENST00000315732 CNIH3Q8TBE1 160 aa11.71□□□□□ -0.53
LSM10-201ENST00000315732 TSEN15Q8WW01 171 aaKnown RBP11.71□□□□□ -0.53
LSM10-201ENST00000315732 RPEQ96AT9 228 aa11.71□□□□□ -0.53
LSM10-201ENST00000315732 GPER1Q99527 375 aa11.71□□□□□ -0.53
LSM10-201ENST00000315732 C9orf16Q9BUW7 83 aa11.71□□□□□ -0.53
LSM10-201ENST00000315732 AMBNQ9NP70 447 aa11.71□□□□□ -0.53
LSM10-201ENST00000315732 CALYQ9NYX4 217 aa11.71□□□□□ -0.53
LSM10-201ENST00000315732 RPL36Q9Y3U8 105 aaKnown RBP11.71□□□□□ -0.53
LSM10-201ENST00000315732 TRAV24A0A0B4J272 114 aa11.7□□□□□ -0.54
LSM10-201ENST00000315732 LOC100130705A0A1B0GUX0 176 aa11.7□□□□□ -0.54
LSM10-201ENST00000315732 FAM90A18PA6NE21 464 aa11.7□□□□□ -0.54
LSM10-201ENST00000315732 FAM90A16PA6NEW6 464 aa11.7□□□□□ -0.54
LSM10-201ENST00000315732 FAM90A20PA6NIJ5 464 aa11.7□□□□□ -0.54
LSM10-201ENST00000315732 FAM90A9PA6NNJ1 464 aa11.7□□□□□ -0.54
LSM10-201ENST00000315732 FAM90A12PA8MX19 464 aa11.7□□□□□ -0.54
LSM10-201ENST00000315732 FAM90A5PA8MXJ8 464 aa11.7□□□□□ -0.54
LSM10-201ENST00000315732 HSPB6O14558 160 aa11.7□□□□□ -0.54
LSM10-201ENST00000315732 PF4P02776 101 aa11.7□□□□□ -0.54
LSM10-201ENST00000315732 FAM90A15PP0C7V4 464 aa11.7□□□□□ -0.54
LSM10-201ENST00000315732 FAM90A13PP0C7W8 464 aa11.7□□□□□ -0.54
LSM10-201ENST00000315732 FAM90A14PP0C7W9 464 aa11.7□□□□□ -0.54
LSM10-201ENST00000315732 FAM90A24PP0C7X0 464 aa11.7□□□□□ -0.54
LSM10-201ENST00000315732 GLP1RP43220 463 aa11.7□□□□□ -0.54
LSM10-201ENST00000315732 KCNJ3P48549 501 aa11.7□□□□□ -0.54
LSM10-201ENST00000315732 SLC35A2P78381 396 aa11.7□□□□□ -0.54
LSM10-201ENST00000315732 PAX5Q02548 391 aa11.7□□□□□ -0.54
LSM10-201ENST00000315732 IL13RA2Q14627 380 aa11.7□□□□□ -0.54
LSM10-201ENST00000315732 RSU1Q15404 277 aa11.7□□□□□ -0.54
LSM10-201ENST00000315732 C9orf152Q5JTZ5 239 aa11.7□□□□□ -0.54
LSM10-201ENST00000315732 UTF1Q5T230 341 aa11.7□□□□□ -0.54
LSM10-201ENST00000315732 ZNF529Q6P280 563 aa11.7□□□□□ -0.54
LSM10-201ENST00000315732 SLC16A12Q6ZSM3 486 aa11.7□□□□□ -0.54
LSM10-201ENST00000315732 OSR2Q8N2R0 312 aa11.7□□□□□ -0.54
LSM10-201ENST00000315732 Q8NFD4 153 aa11.7□□□□□ -0.54
LSM10-201ENST00000315732 OR10A7Q8NGE5 316 aa11.7□□□□□ -0.54
LSM10-201ENST00000315732 OR52I1Q8NGK6 324 aa11.7□□□□□ -0.54
LSM10-201ENST00000315732 OR13A1Q8NGR1 328 aa11.7□□□□□ -0.54
LSM10-201ENST00000315732 TNFAIP8L1Q8WVP5 186 aa11.7□□□□□ -0.54
LSM10-201ENST00000315732 TOMM40LQ969M1 308 aa11.7□□□□□ -0.54
LSM10-201ENST00000315732 IDI2-AS1Q9NZ38 188 aa11.7□□□□□ -0.54
LSM10-201ENST00000315732 KIF25Q9UIL4 384 aa11.7□□□□□ -0.54
LSM10-201ENST00000315732 ZNF281Q9Y2X9 895 aa11.7□□□□□ -0.54
LSM10-201ENST00000315732 SH2D7A6NKC9 451 aaPredicted RBP11.69□□□□□ -0.54
LSM10-201ENST00000315732 NPIPB11E5RHQ5 1161 aa11.69□□□□□ -0.54
LSM10-201ENST00000315732 DUS4LO95620 317 aaKnown RBP11.69□□□□□ -0.54
LSM10-201ENST00000315732 CLIC3O95833 236 aa11.69□□□□□ -0.54
LSM10-201ENST00000315732 IL1AP01583 271 aa11.69□□□□□ -0.54
LSM10-201ENST00000315732 MADCAM1Q13477 382 aa11.69□□□□□ -0.54
LSM10-201ENST00000315732 ZSCAN26Q16670 478 aa11.69□□□□□ -0.54
LSM10-201ENST00000315732 LPCAT4Q643R3 524 aa11.69□□□□□ -0.54
LSM10-201ENST00000315732 ASCL4Q6XD76 172 aa11.69□□□□□ -0.54
LSM10-201ENST00000315732 GPR148Q8TDV2 347 aa11.69□□□□□ -0.54
LSM10-201ENST00000315732 RCC1LQ96I51 464 aaKnown RBP11.69□□□□□ -0.54
LSM10-201ENST00000315732 SLC29A1Q99808 456 aa11.69□□□□□ -0.54
LSM10-201ENST00000315732 FAM118AQ9NWS6 357 aa11.69□□□□□ -0.54
LSM10-201ENST00000315732 PSG11Q9UQ72 335 aa11.69□□□□□ -0.54
LSM10-201ENST00000315732 MOB4Q9Y3A3 225 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms