RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 ARHGDIBP52566 201 aa6.58□□□□□ -1.36
CNOT4-201ENST00000315544 IGSF11Q5DX21 431 aa6.58□□□□□ -1.36
CNOT4-201ENST00000315544 PYY3Q5JQD4 70 aa6.58□□□□□ -1.36
CNOT4-201ENST00000315544 LUZP2Q86TE4 346 aa6.58□□□□□ -1.36
CNOT4-201ENST00000315544 RARRES2Q99969 163 aa6.58□□□□□ -1.36
CNOT4-201ENST00000315544 ZDHHC11Q9H8X9 412 aa6.58□□□□□ -1.36
CNOT4-201ENST00000315544 C3orf80F5H4A9 247 aa6.57□□□□□ -1.36
CNOT4-201ENST00000315544 IGLV1-44P01699 117 aa6.57□□□□□ -1.36
CNOT4-201ENST00000315544 TYMSP04818 313 aa6.57□□□□□ -1.36
CNOT4-201ENST00000315544 TMEM225BP0DP42 221 aa6.57□□□□□ -1.36
CNOT4-201ENST00000315544 PLA2G2AP14555 144 aa6.57□□□□□ -1.36
CNOT4-201ENST00000315544 PI3P19957 117 aa6.57□□□□□ -1.36
CNOT4-201ENST00000315544 SRD5A2P31213 254 aa6.57□□□□□ -1.36
CNOT4-201ENST00000315544 CD81P60033 236 aa6.57□□□□□ -1.36
CNOT4-201ENST00000315544 RNASE10Q5GAN6 216 aaKnown RBP6.57□□□□□ -1.36
CNOT4-201ENST00000315544 BEX5Q5H9J7 111 aa6.57□□□□□ -1.36
CNOT4-201ENST00000315544 DPPA3Q6W0C5 159 aa6.57□□□□□ -1.36
CNOT4-201ENST00000315544 ZNF611Q8N823 705 aa6.57□□□□□ -1.36
CNOT4-201ENST00000315544 Q8WTZ3 238 aa6.57□□□□□ -1.36
CNOT4-201ENST00000315544 DNAJA3Q96EY1 480 aa6.57□□□□□ -1.36
CNOT4-201ENST00000315544 KIRREL1Q96J84 757 aa6.57□□□□□ -1.36
CNOT4-201ENST00000315544 CLEC4MQ9H2X3 399 aaPredicted RBP6.57□□□□□ -1.36
CNOT4-201ENST00000315544 RAXQ9Y2V3 346 aa6.57□□□□□ -1.36
CNOT4-201ENST00000315544 G3V3Y1 287 aa6.57□□□□□ -1.36
CNOT4-201ENST00000315544 H3BSH0 61 aa6.57□□□□□ -1.36
CNOT4-201ENST00000315544 TPT1P13693 172 aaKnown RBP6.57□□□□□ -1.36
CNOT4-201ENST00000315544 IGFBP2P18065 325 aa6.57□□□□□ -1.36
CNOT4-201ENST00000315544 MEOX2P50222 304 aa6.57□□□□□ -1.36
CNOT4-201ENST00000315544 TAS2R46P59540 309 aa6.57□□□□□ -1.36
CNOT4-201ENST00000315544 RPL15P61313 204 aaKnown RBP6.57□□□□□ -1.36
CNOT4-201ENST00000315544 SLC35A1P78382 337 aa6.57□□□□□ -1.36
CNOT4-201ENST00000315544 TMEM88Q6PEY1 159 aa6.57□□□□□ -1.36
CNOT4-201ENST00000315544 ZNF101Q8IZC7 436 aa6.57□□□□□ -1.36
CNOT4-201ENST00000315544 SVBPQ8N300 66 aa6.57□□□□□ -1.36
CNOT4-201ENST00000315544 MR1Q95460 341 aa6.57□□□□□ -1.36
CNOT4-201ENST00000315544 VSIRQ9H7M9 311 aa6.57□□□□□ -1.36
CNOT4-201ENST00000315544 IGHEP01854 428 aa6.57□□□□□ -1.36
CNOT4-201ENST00000315544 IFNA4P05014 189 aa6.57□□□□□ -1.36
CNOT4-201ENST00000315544 GZMHP20718 246 aa6.57□□□□□ -1.36
CNOT4-201ENST00000315544 SKP1P63208 163 aa6.57□□□□□ -1.36
CNOT4-201ENST00000315544 IL24Q13007 206 aa6.57□□□□□ -1.36
CNOT4-201ENST00000315544 Q6ZS92 163 aa6.57□□□□□ -1.36
CNOT4-201ENST00000315544 PARP12Q9H0J9 701 aaKnown RBP6.57□□□□□ -1.36
CNOT4-201ENST00000315544 RGCCQ9H4X1 137 aa6.57□□□□□ -1.36
CNOT4-201ENST00000315544 PATZ1Q9HBE1 687 aaKnown RBP6.57□□□□□ -1.36
CNOT4-201ENST00000315544 OR10H1Q9Y4A9 318 aa6.57□□□□□ -1.36
CNOT4-201ENST00000315544 ARGFXA6NJG6 315 aa6.56□□□□□ -1.36
CNOT4-201ENST00000315544 ZFP92A6NM28 416 aa6.56□□□□□ -1.36
CNOT4-201ENST00000315544 GPR137BO60478 399 aa6.56□□□□□ -1.36
CNOT4-201ENST00000315544 VAMP5O95183 116 aa6.56□□□□□ -1.36
CNOT4-201ENST00000315544 LHBP01229 141 aa6.56□□□□□ -1.36
CNOT4-201ENST00000315544 COX5AP20674 150 aa6.56□□□□□ -1.36
CNOT4-201ENST00000315544 CA6P23280 308 aa6.56□□□□□ -1.36
CNOT4-201ENST00000315544 IL12BP29460 328 aa6.56□□□□□ -1.36
CNOT4-201ENST00000315544 EWSR1Q01844 656 aaKnown RBP eCLIP6.56□□□□□ -1.36
CNOT4-201ENST00000315544 SSPNQ14714 243 aa6.56□□□□□ -1.36
CNOT4-201ENST00000315544 CEACAM21Q3KPI0 293 aa6.56□□□□□ -1.36
CNOT4-201ENST00000315544 RNFT1Q5M7Z0 435 aa6.56□□□□□ -1.36
CNOT4-201ENST00000315544 TMED4Q7Z7H5 227 aa6.56□□□□□ -1.36
CNOT4-201ENST00000315544 LINC00596Q86U02 117 aa6.56□□□□□ -1.36
CNOT4-201ENST00000315544 IGFBPL1Q8WX77 278 aa6.56□□□□□ -1.36
CNOT4-201ENST00000315544 TECTBQ96PL2 329 aa6.56□□□□□ -1.36
CNOT4-201ENST00000315544 SUCNR1Q9BXA5 334 aa6.56□□□□□ -1.36
CNOT4-201ENST00000315544 C7orf69Q9H7B7 122 aa6.56□□□□□ -1.36
CNOT4-201ENST00000315544 ATP23Q9Y6H3 246 aa6.56□□□□□ -1.36
CNOT4-201ENST00000315544 H0Y980 276 aa6.56□□□□□ -1.36
CNOT4-201ENST00000315544 AHSA1O95433 338 aa6.56□□□□□ -1.36
CNOT4-201ENST00000315544 CYCSP99999 105 aaKnown RBP6.56□□□□□ -1.36
CNOT4-201ENST00000315544 GJC3Q8NFK1 279 aa6.56□□□□□ -1.36
CNOT4-201ENST00000315544 OR1F12Q8NHA8 337 aa6.56□□□□□ -1.36
CNOT4-201ENST00000315544 TSEN15Q8WW01 171 aaKnown RBP6.56□□□□□ -1.36
CNOT4-201ENST00000315544 OR6C1Q96RD1 312 aa6.56□□□□□ -1.36
CNOT4-201ENST00000315544 LOC102723971A0A1B0GUV8 181 aa6.56□□□□□ -1.36
CNOT4-201ENST00000315544 SLC33A1O00400 549 aaPredicted RBP6.56□□□□□ -1.36
CNOT4-201ENST00000315544 SDCBPO00560 298 aaPredicted RBP6.56□□□□□ -1.36
CNOT4-201ENST00000315544 H2BFMP0C1H6 154 aa6.56□□□□□ -1.36
CNOT4-201ENST00000315544 AADACP22760 399 aa6.56□□□□□ -1.36
CNOT4-201ENST00000315544 RPL12P30050 165 aaKnown RBP6.56□□□□□ -1.36
CNOT4-201ENST00000315544 SRSF6Q13247 344 aaKnown RBP6.56□□□□□ -1.36
CNOT4-201ENST00000315544 C4orf46Q504U0 113 aa6.56□□□□□ -1.36
CNOT4-201ENST00000315544 C1orf189Q5VU69 101 aa6.56□□□□□ -1.36
CNOT4-201ENST00000315544 SEM1Q6ZVN7 128 aa6.56□□□□□ -1.36
CNOT4-201ENST00000315544 TMEM17Q86X19 198 aa6.56□□□□□ -1.36
CNOT4-201ENST00000315544 ZNF525Q8N782 197 aa6.56□□□□□ -1.36
CNOT4-201ENST00000315544 RBMXL3Q8N7X1 1067 aaKnown RBP6.56□□□□□ -1.36
CNOT4-201ENST00000315544 ZNF596Q8TC21 504 aa6.56□□□□□ -1.36
CNOT4-201ENST00000315544 SECTM1Q8WVN6 248 aa6.56□□□□□ -1.36
CNOT4-201ENST00000315544 ZNF251Q9BRH9 671 aa6.56□□□□□ -1.36
CNOT4-201ENST00000315544 PCDHB16Q9NRJ7 776 aa6.56□□□□□ -1.36
CNOT4-201ENST00000315544 NXT1Q9UKK6 140 aaKnown RBP6.56□□□□□ -1.36
CNOT4-201ENST00000315544 IKZF2Q9UKS7 526 aa6.56□□□□□ -1.36
CNOT4-201ENST00000315544 LSM4Q9Y4Z0 139 aaKnown RBP6.56□□□□□ -1.36
CNOT4-201ENST00000315544 DOCK11Q5JSL3 2073 aa6.55□□□□□ -1.36
CNOT4-201ENST00000315544 TRBV24-1A0A075B6N3 115 aa6.55□□□□□ -1.36
CNOT4-201ENST00000315544 A0A1B0GU03 582 aa6.55□□□□□ -1.36
CNOT4-201ENST00000315544 CXorf65A6NEN9 183 aa6.55□□□□□ -1.36
CNOT4-201ENST00000315544 ZNF891A8MT65 544 aaPredicted RBP6.55□□□□□ -1.36
CNOT4-201ENST00000315544 SEC14L6B5MCN3 397 aa6.55□□□□□ -1.36
CNOT4-201ENST00000315544 MPPED1O15442 326 aa6.55□□□□□ -1.36
CNOT4-201ENST00000315544 SMIM6P0DI80 62 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms