RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 OR10G8Q8NGN5 311 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 NCBP2LA6PVI3 153 aaKnown RBP7.79□□□□□ -1.16
COL6A5-202ENST00000312481 HKR1P10072 659 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 SNRPNP63162 240 aaKnown RBP7.79□□□□□ -1.16
COL6A5-202ENST00000312481 SLC25A26Q70HW3 274 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 LRP11Q86VZ4 500 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 ROBO4Q8WZ75 1007 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 MARS2Q96GW9 593 aaKnown RBP7.79□□□□□ -1.16
COL6A5-202ENST00000312481 SFRP2Q96HF1 295 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 P4HTMQ9NXG6 502 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 CLEC5AQ9NY25 188 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 C1RLQ9NZP8 487 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 IL19Q9UHD0 177 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 KCNE5Q9UJ90 142 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 MRPS18CQ9Y3D5 142 aaKnown RBP7.79□□□□□ -1.16
COL6A5-202ENST00000312481 SDCBPO00560 298 aaPredicted RBP7.79□□□□□ -1.16
COL6A5-202ENST00000312481 ZNF207O43670 478 aaKnown RBP7.79□□□□□ -1.16
COL6A5-202ENST00000312481 OR4A8P0C604 315 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 OR13C7P0DN81 318 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 DEFB110Q30KQ9 67 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 MAP1LC3CQ9BXW4 147 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 INO80CQ6PI98 192 aaPredicted RBP7.79□□□□□ -1.16
COL6A5-202ENST00000312481 ETV3LQ6ZN32 361 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 ZNF611Q8N823 705 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 ARHGAP5-AS1Q96IT6 56 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 PACRGQ96M98 296 aaPredicted RBP7.79□□□□□ -1.16
COL6A5-202ENST00000312481 PRDM14Q9GZV8 571 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 A0A1W2PPQ1 181 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 SPANXN5Q5MJ07 72 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 OR11G2Q8NGC1 345 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 OR5R1Q8NH85 324 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 MRPL32Q9BYC8 188 aaKnown RBP7.79□□□□□ -1.16
COL6A5-202ENST00000312481 RNF167Q9H6Y7 350 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 FRRS1LQ9P0K9 344 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 WNT16Q9UBV4 365 aa7.79□□□□□ -1.16
COL6A5-202ENST00000312481 LOC102723971A0A1B0GUV8 181 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 H7C1C5 153 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 CYR61O00622 381 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 COX7A2P2O60397 106 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 PIAS2O75928 621 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 P2RY6Q15077 328 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 OR13C5Q8NGS8 318 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 THAP3Q8WTV1 239 aaPredicted RBP7.78□□□□□ -1.16
COL6A5-202ENST00000312481 SERTM2A0A1B0GWG4 89 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 K7ESM1 405 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 AWAT1Q58HT5 328 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 TMEM215Q68D42 235 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 ZFP62Q8NB50 900 aaPredicted RBP7.78□□□□□ -1.16
COL6A5-202ENST00000312481 TSPAN32Q96QS1 320 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 TINAGL1Q9GZM7 467 aaPredicted RBP7.78□□□□□ -1.16
COL6A5-202ENST00000312481 UQCR10Q9UDW1 63 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 OR7C2O60412 319 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 RPLP1P05386 114 aaKnown RBP7.78□□□□□ -1.16
COL6A5-202ENST00000312481 SP1P08047 785 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 SPNP16150 400 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 HAAOP46952 286 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 ANKRD55Q3KP44 614 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.78□□□□□ -1.16
COL6A5-202ENST00000312481 CLN8Q9UBY8 286 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 OSGIN2Q9Y236 505 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 SIT1Q9Y3P8 196 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 METTL12A8MUP2 240 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 PNPP00491 289 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 NHLH2Q02577 135 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 STUMQ69YW2 141 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 GRAMD2BQ96HH9 432 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 PECRQ9BY49 303 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 A0A0U1RQK1 487 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 ZNF320A2RRD8 509 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 POLR2GP62487 172 aaKnown RBP eCLIP7.78□□□□□ -1.16
COL6A5-202ENST00000312481 RPS4XP62701 263 aaKnown RBP7.78□□□□□ -1.16
COL6A5-202ENST00000312481 FA2HQ7L5A8 372 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 PRR22Q8IZ63 422 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 OR4F17Q8NGA8 305 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 ZNF845Q96IR2 970 aaPredicted RBP7.78□□□□□ -1.16
COL6A5-202ENST00000312481 CNTD2Q9H8S5 307 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 ZFP64Q9NPA5 681 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 PROCRQ9UNN8 238 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 OTOL1A6NHN0 477 aaPredicted RBP7.78□□□□□ -1.16
COL6A5-202ENST00000312481 PRRT4C9JH25 899 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 RUNX2Q13950 521 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 OR5AU1Q8NGC0 362 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 OR10V1Q8NGI7 309 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 PGLYRP3Q96LB9 341 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 FAAP24Q9BTP7 215 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 CRYM-AS1A6NIL9 109 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 GLRA1P23415 457 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 PTGDSP41222 190 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 DEFB103AP81534 67 aa7.78□□□□□ -1.16
COL6A5-202ENST00000312481 RTN4RL1Q86UN2 441 aaPredicted RBP7.78□□□□□ -1.16
COL6A5-202ENST00000312481 BSCL2Q96G97 398 aaPredicted RBP7.78□□□□□ -1.16
COL6A5-202ENST00000312481 RCL1Q9Y2P8 373 aaKnown RBP7.78□□□□□ -1.16
COL6A5-202ENST00000312481 NPIPB9F8W1W9 429 aa7.77□□□□□ -1.16
COL6A5-202ENST00000312481 SMIM17P0DL12 118 aa7.77□□□□□ -1.16
COL6A5-202ENST00000312481 SLC37A1P57057 533 aa7.77□□□□□ -1.16
COL6A5-202ENST00000312481 OR11H7Q8NGC8 314 aa7.77□□□□□ -1.16
COL6A5-202ENST00000312481 TMEM45BQ96B21 275 aa7.77□□□□□ -1.16
COL6A5-202ENST00000312481 MOB3AQ96BX8 217 aa7.77□□□□□ -1.16
COL6A5-202ENST00000312481 FOXB1Q99853 325 aa7.77□□□□□ -1.16
COL6A5-202ENST00000312481 NRIP2Q9BQI9 281 aa7.77□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms