RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 TXNDC17Q9BRA2 123 aa13.77□□□□□ -0.21
HCFC1-201ENST00000310441 MBNL1Q9NR56 388 aaKnown RBP13.77□□□□□ -0.21
HCFC1-201ENST00000310441 FBXL17Q9UF56 701 aa13.77□□□□□ -0.21
HCFC1-201ENST00000310441 OR8B3Q8NGG8 313 aa13.76□□□□□ -0.21
HCFC1-201ENST00000310441 SLC25A40Q8TBP6 338 aa13.76□□□□□ -0.21
HCFC1-201ENST00000310441 OR8B2Q96RD0 313 aa13.76□□□□□ -0.21
HCFC1-201ENST00000310441 SHISA7A6NL88 538 aa13.76□□□□□ -0.21
HCFC1-201ENST00000310441 MT-ND6P03923 174 aa13.76□□□□□ -0.21
HCFC1-201ENST00000310441 FADS6Q8N9I5 356 aa13.76□□□□□ -0.21
HCFC1-201ENST00000310441 GMPPAQ96IJ6 420 aaPredicted RBP13.76□□□□□ -0.21
HCFC1-201ENST00000310441 SAP30LQ9HAJ7 183 aa13.76□□□□□ -0.21
HCFC1-201ENST00000310441 PDFQ9HBH1 243 aa13.76□□□□□ -0.21
HCFC1-201ENST00000310441 ST6GAL1P15907 406 aa13.76□□□□□ -0.21
HCFC1-201ENST00000310441 VDAC1P21796 283 aa13.76□□□□□ -0.21
HCFC1-201ENST00000310441 OR2D3Q8NGH3 330 aa13.76□□□□□ -0.21
HCFC1-201ENST00000310441 RBM14Q96PK6 669 aaKnown RBP13.76□□□□□ -0.21
HCFC1-201ENST00000310441 WDR81Q562E7 1941 aa13.76□□□□□ -0.21
HCFC1-201ENST00000310441 ZNF345Q14585 488 aa13.76□□□□□ -0.21
HCFC1-201ENST00000310441 C21orf62-AS1Q17RA5 79 aa13.76□□□□□ -0.21
HCFC1-201ENST00000310441 CCSMST1Q4G0I0 132 aa13.76□□□□□ -0.21
HCFC1-201ENST00000310441 C19orf54Q5BKX5 351 aa13.76□□□□□ -0.21
HCFC1-201ENST00000310441 PAQR9Q6ZVX9 377 aa13.76□□□□□ -0.21
HCFC1-201ENST00000310441 GBGT1Q8N5D6 347 aa13.76□□□□□ -0.21
HCFC1-201ENST00000310441 SHISA4Q96DD7 197 aa13.76□□□□□ -0.21
HCFC1-201ENST00000310441 KLKB1P03952 638 aa13.76□□□□□ -0.21
HCFC1-201ENST00000310441 AVPR2P30518 371 aa13.76□□□□□ -0.21
HCFC1-201ENST00000310441 CLEC5AQ9NY25 188 aa13.76□□□□□ -0.21
HCFC1-201ENST00000310441 EXOGQ9Y2C4 368 aaKnown RBP13.76□□□□□ -0.21
HCFC1-201ENST00000310441 DHRS7CA6NNS2 312 aa13.76□□□□□ -0.21
HCFC1-201ENST00000310441 NPIPB6E9PJ23 425 aa13.76□□□□□ -0.21
HCFC1-201ENST00000310441 OR4A8P0C604 315 aa13.76□□□□□ -0.21
HCFC1-201ENST00000310441 FBXO17Q96EF6 278 aa13.76□□□□□ -0.21
HCFC1-201ENST00000310441 IGSF11Q5DX21 431 aa13.76□□□□□ -0.21
HCFC1-201ENST00000310441 DLK2Q6UY11 383 aa13.76□□□□□ -0.21
HCFC1-201ENST00000310441 MRAP2Q96G30 205 aa13.76□□□□□ -0.21
HCFC1-201ENST00000310441 PIPOXQ9P0Z9 390 aa13.76□□□□□ -0.21
HCFC1-201ENST00000310441 CA11O75493 328 aa13.75□□□□□ -0.21
HCFC1-201ENST00000310441 HTRA3P83110 453 aa13.75□□□□□ -0.21
HCFC1-201ENST00000310441 HYAL1Q12794 435 aa13.75□□□□□ -0.21
HCFC1-201ENST00000310441 ETFBKMTQ8IXQ9 262 aa13.75□□□□□ -0.21
HCFC1-201ENST00000310441 PCNX1Q96RV3 2341 aa13.75□□□□□ -0.21
HCFC1-201ENST00000310441 OR8I2Q8N0Y5 310 aa13.75□□□□□ -0.21
HCFC1-201ENST00000310441 VN1R1Q9GZP7 353 aa13.75□□□□□ -0.21
HCFC1-201ENST00000310441 OR8A1Q8NGG7 326 aa13.75□□□□□ -0.21
HCFC1-201ENST00000310441 GNG10P50151 68 aa13.75□□□□□ -0.21
HCFC1-201ENST00000310441 C12orf73Q69YU5 71 aa13.75□□□□□ -0.21
HCFC1-201ENST00000310441 ZNF275Q9NSD4 429 aaPredicted RBP13.75□□□□□ -0.21
HCFC1-201ENST00000310441 ING1Q9UK53 422 aaPredicted RBP13.75□□□□□ -0.21
HCFC1-201ENST00000310441 FOXF1Q12946 379 aa13.75□□□□□ -0.21
HCFC1-201ENST00000310441 C4orf45Q96LM5 186 aa13.75□□□□□ -0.21
HCFC1-201ENST00000310441 CDX2Q99626 313 aaPredicted RBP13.75□□□□□ -0.21
HCFC1-201ENST00000310441 SLIRPQ9GZT3 109 aaKnown RBP13.75□□□□□ -0.21
HCFC1-201ENST00000310441 SS18L1O75177 396 aaPredicted RBP13.75□□□□□ -0.21
HCFC1-201ENST00000310441 SSPNQ14714 243 aa13.75□□□□□ -0.21
HCFC1-201ENST00000310441 DOCK4Q8N1I0 1966 aa13.75□□□□□ -0.21
HCFC1-201ENST00000310441 SIPA1L3O60292 1781 aaPredicted RBP13.74□□□□□ -0.21
HCFC1-201ENST00000310441 TMEM33P57088 247 aa13.74□□□□□ -0.21
HCFC1-201ENST00000310441 RAC3P60763 192 aa13.74□□□□□ -0.21
HCFC1-201ENST00000310441 GAMTQ14353 236 aa13.74□□□□□ -0.21
HCFC1-201ENST00000310441 OR4A47Q6IF82 309 aa13.74□□□□□ -0.21
HCFC1-201ENST00000310441 CACNA1BQ00975 2339 aa13.74□□□□□ -0.21
HCFC1-201ENST00000310441 ACACAQ13085 2346 aa13.74□□□□□ -0.21
HCFC1-201ENST00000310441 SIGLEC7Q9Y286 467 aa13.74□□□□□ -0.21
HCFC1-201ENST00000310441 HPXP02790 462 aa13.74□□□□□ -0.21
HCFC1-201ENST00000310441 ST3GAL2Q16842 350 aa13.74□□□□□ -0.21
HCFC1-201ENST00000310441 LINC01553A4QN01 128 aa13.74□□□□□ -0.21
HCFC1-201ENST00000310441 IGLV3-27P01718 113 aa13.74□□□□□ -0.21
HCFC1-201ENST00000310441 KIRREL2Q6UWL6 708 aa13.74□□□□□ -0.21
HCFC1-201ENST00000310441 NHSQ6T4R5 1651 aa13.74□□□□□ -0.21
HCFC1-201ENST00000310441 RALGAPA2Q2PPJ7 1873 aa13.74□□□□□ -0.21
HCFC1-201ENST00000310441 NCKAP5O14513 1909 aa13.74□□□□□ -0.21
HCFC1-201ENST00000310441 SPINK4O60575 86 aa13.74□□□□□ -0.21
HCFC1-201ENST00000310441 DNAL4O96015 105 aa13.74□□□□□ -0.21
HCFC1-201ENST00000310441 VEGFBP49765 207 aa13.74□□□□□ -0.21
HCFC1-201ENST00000310441 RRN3P1Q2M238 152 aa13.74□□□□□ -0.21
HCFC1-201ENST00000310441 SPPL3Q8TCT6 385 aa13.74□□□□□ -0.21
HCFC1-201ENST00000310441 GPR61Q9BZJ8 451 aa13.74□□□□□ -0.21
HCFC1-201ENST00000310441 TRBV5-4A0A0C4DH59 114 aa13.74□□□□□ -0.21
HCFC1-201ENST00000310441 OR4C46A6NHA9 309 aa13.74□□□□□ -0.21
HCFC1-201ENST00000310441 AWAT1Q58HT5 328 aa13.74□□□□□ -0.21
HCFC1-201ENST00000310441 R3HDM4Q96D70 268 aa13.74□□□□□ -0.21
HCFC1-201ENST00000310441 SRSF10O75494 262 aaKnown RBP13.74□□□□□ -0.21
HCFC1-201ENST00000310441 CA6P23280 308 aa13.74□□□□□ -0.21
HCFC1-201ENST00000310441 SPEM1Q8N4L4 309 aa13.74□□□□□ -0.21
HCFC1-201ENST00000310441 KCNMB1Q16558 191 aa13.73□□□□□ -0.21
HCFC1-201ENST00000310441 TEPPQ6URK8 271 aa13.73□□□□□ -0.21
HCFC1-201ENST00000310441 OR11G2Q8NGC1 345 aa13.73□□□□□ -0.21
HCFC1-201ENST00000310441 VSIG4Q9Y279 399 aa13.73□□□□□ -0.21
HCFC1-201ENST00000310441 VCX2Q9H322 139 aa13.73□□□□□ -0.21
HCFC1-201ENST00000310441 ZFPL1O95159 310 aa13.73□□□□□ -0.21
HCFC1-201ENST00000310441 CA2P00918 260 aa13.73□□□□□ -0.21
HCFC1-201ENST00000310441 CRYBB2P43320 205 aa13.73□□□□□ -0.21
HCFC1-201ENST00000310441 PMCHL1Q16048 86 aa13.73□□□□□ -0.21
HCFC1-201ENST00000310441 ZNF764Q96H86 408 aaPredicted RBP13.73□□□□□ -0.21
HCFC1-201ENST00000310441 SARGQ9BW04 601 aa13.73□□□□□ -0.21
HCFC1-201ENST00000310441 C6orf106Q9H6K1 298 aaPredicted RBP13.73□□□□□ -0.21
HCFC1-201ENST00000310441 MPV17LQ2QL34 196 aa13.73□□□□□ -0.21
HCFC1-201ENST00000310441 OR6X1Q8NH79 312 aa13.73□□□□□ -0.21
HCFC1-201ENST00000310441 CDAP32320 146 aa13.73□□□□□ -0.21
HCFC1-201ENST00000310441 SPANXN1Q5VSR9 72 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms