RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 GNRHR2Q96P88 292 aa11.62□□□□□ -0.55
SNED1-201ENST00000310397 NHLH1Q02575 133 aa11.62□□□□□ -0.55
SNED1-201ENST00000310397 NHLH2Q02577 135 aa11.62□□□□□ -0.55
SNED1-201ENST00000310397 ANKRD34CP0C6C1 535 aa11.62□□□□□ -0.55
SNED1-201ENST00000310397 OR2D2Q9H210 308 aa11.62□□□□□ -0.55
SNED1-201ENST00000310397 GPR27Q9NS67 375 aa11.62□□□□□ -0.55
SNED1-201ENST00000310397 SERF2P84101 59 aa11.62□□□□□ -0.55
SNED1-201ENST00000310397 SKP2Q13309 424 aa11.62□□□□□ -0.55
SNED1-201ENST00000310397 ZNF660Q6AZW8 331 aaPredicted RBP11.62□□□□□ -0.55
SNED1-201ENST00000310397 KISS1RQ969F8 398 aaPredicted RBP11.62□□□□□ -0.55
SNED1-201ENST00000310397 SBF1O95248 1867 aa11.62□□□□□ -0.55
SNED1-201ENST00000310397 SMIM17P0DL12 118 aa11.62□□□□□ -0.55
SNED1-201ENST00000310397 DAOP14920 347 aa11.62□□□□□ -0.55
SNED1-201ENST00000310397 VMA21Q3ZAQ7 101 aa11.62□□□□□ -0.55
SNED1-201ENST00000310397 SPATA46Q5T0L3 261 aa11.62□□□□□ -0.55
SNED1-201ENST00000310397 LINC00596Q86U02 117 aa11.62□□□□□ -0.55
SNED1-201ENST00000310397 ZNF383Q8NA42 475 aa11.62□□□□□ -0.55
SNED1-201ENST00000310397 GPA33Q99795 319 aa11.62□□□□□ -0.55
SNED1-201ENST00000310397 A0A1W2PN81 502 aa11.62□□□□□ -0.55
SNED1-201ENST00000310397 MED19A0JLT2 244 aaPredicted RBP11.62□□□□□ -0.55
SNED1-201ENST00000310397 METTL12A8MUP2 240 aa11.62□□□□□ -0.55
SNED1-201ENST00000310397 RPLP1P05386 114 aaKnown RBP11.62□□□□□ -0.55
SNED1-201ENST00000310397 CTGFP29279 349 aa11.62□□□□□ -0.55
SNED1-201ENST00000310397 RNF133Q8WVZ7 376 aa11.62□□□□□ -0.55
SNED1-201ENST00000310397 ADTRPQ96IZ2 230 aa11.62□□□□□ -0.55
SNED1-201ENST00000310397 NRIP2Q9BQI9 281 aa11.62□□□□□ -0.55
SNED1-201ENST00000310397 TMEM204Q9BSN7 226 aa11.62□□□□□ -0.55
SNED1-201ENST00000310397 SEBOXQ9HB31 216 aaPredicted RBP11.62□□□□□ -0.55
SNED1-201ENST00000310397 PRRG2O14669 202 aa11.61□□□□□ -0.55
SNED1-201ENST00000310397 C9orf152Q5JTZ5 239 aa11.61□□□□□ -0.55
SNED1-201ENST00000310397 SLC36A1Q7Z2H8 476 aa11.61□□□□□ -0.55
SNED1-201ENST00000310397 PCNX1Q96RV3 2341 aa11.61□□□□□ -0.55
SNED1-201ENST00000310397 TSPO2Q5TGU0 170 aa11.61□□□□□ -0.55
SNED1-201ENST00000310397 CHST5Q9GZS9 411 aa11.61□□□□□ -0.55
SNED1-201ENST00000310397 NRXN2Q9P2S2 1712 aa11.61□□□□□ -0.55
SNED1-201ENST00000310397 DEDDO75618 318 aa11.61□□□□□ -0.55
SNED1-201ENST00000310397 HOXA6P31267 233 aa11.61□□□□□ -0.55
SNED1-201ENST00000310397 OPRK1P41145 380 aa11.61□□□□□ -0.55
SNED1-201ENST00000310397 TRA2AQ13595 282 aaKnown RBP eCLIP11.61□□□□□ -0.55
SNED1-201ENST00000310397 PABPC1L2AQ5JQF8 200 aa11.61□□□□□ -0.55
SNED1-201ENST00000310397 TMEM230Q96A57 120 aa11.61□□□□□ -0.55
SNED1-201ENST00000310397 TNFRSF1AP19438 455 aa11.61□□□□□ -0.55
SNED1-201ENST00000310397 FSTP19883 344 aa11.61□□□□□ -0.55
SNED1-201ENST00000310397 EWSR1Q01844 656 aaKnown RBP eCLIP11.61□□□□□ -0.55
SNED1-201ENST00000310397 ZFP64Q9NPA5 681 aa11.61□□□□□ -0.55
SNED1-201ENST00000310397 LIPT2A6NK58 231 aa11.61□□□□□ -0.55
SNED1-201ENST00000310397 SHISA8B8ZZ34 492 aa11.61□□□□□ -0.55
SNED1-201ENST00000310397 MMP9P14780 707 aa11.61□□□□□ -0.55
SNED1-201ENST00000310397 LIMS1P48059 325 aa11.61□□□□□ -0.55
SNED1-201ENST00000310397 CEBPEQ15744 281 aa11.61□□□□□ -0.55
SNED1-201ENST00000310397 HOGA1Q86XE5 327 aa11.61□□□□□ -0.55
SNED1-201ENST00000310397 DEFB108BQ8NET1 73 aa11.61□□□□□ -0.55
SNED1-201ENST00000310397 OR6C3Q9NZP0 311 aa11.61□□□□□ -0.55
SNED1-201ENST00000310397 LRRC10Q5BKY1 277 aa11.61□□□□□ -0.55
SNED1-201ENST00000310397 PRSS3P2Q8NHM4 247 aa11.61□□□□□ -0.55
SNED1-201ENST00000310397 POM121Q96HA1 1249 aa11.61□□□□□ -0.55
SNED1-201ENST00000310397 FCGR3BO75015 233 aa11.61□□□□□ -0.55
SNED1-201ENST00000310397 CD226Q15762 336 aa11.61□□□□□ -0.55
SNED1-201ENST00000310397 NHLRC3Q5JS37 347 aa11.61□□□□□ -0.55
SNED1-201ENST00000310397 OR4S2Q8NH73 311 aa11.61□□□□□ -0.55
SNED1-201ENST00000310397 A0A1W2PPV9 198 aa11.6□□□□□ -0.55
SNED1-201ENST00000310397 ANKRD37Q7Z713 158 aa11.6□□□□□ -0.55
SNED1-201ENST00000310397 CES1P1Q9UKY3 287 aa11.6□□□□□ -0.55
SNED1-201ENST00000310397 CYR61O00622 381 aa11.6□□□□□ -0.55
SNED1-201ENST00000310397 TMIGD3P0DMS9 266 aaPredicted RBP11.6□□□□□ -0.55
SNED1-201ENST00000310397 SRD5A2P31213 254 aa11.6□□□□□ -0.55
SNED1-201ENST00000310397 ZNF766Q5HY98 468 aa11.6□□□□□ -0.55
SNED1-201ENST00000310397 SPEM1Q8N4L4 309 aa11.6□□□□□ -0.55
SNED1-201ENST00000310397 ATP23Q9Y6H3 246 aa11.6□□□□□ -0.55
SNED1-201ENST00000310397 CA6P23280 308 aa11.6□□□□□ -0.55
SNED1-201ENST00000310397 ACAA2P42765 397 aaKnown RBP11.6□□□□□ -0.55
SNED1-201ENST00000310397 SMAD4Q13485 552 aaKnown RBP11.6□□□□□ -0.55
SNED1-201ENST00000310397 CXorf65A6NEN9 183 aa11.6□□□□□ -0.55
SNED1-201ENST00000310397 PTP4A3O75365 173 aa11.6□□□□□ -0.55
SNED1-201ENST00000310397 MUC1P15941 1255 aaPredicted RBP11.6□□□□□ -0.55
SNED1-201ENST00000310397 ZMIZ1Q9ULJ6 1067 aa11.6□□□□□ -0.55
SNED1-201ENST00000310397 ITGBL1O95965 494 aaPredicted RBP11.6□□□□□ -0.55
SNED1-201ENST00000310397 SLC25A5P05141 298 aaKnown RBP11.6□□□□□ -0.55
SNED1-201ENST00000310397 SP1P08047 785 aa11.6□□□□□ -0.55
SNED1-201ENST00000310397 VSIG10L2P0DP72 767 aa11.6□□□□□ -0.55
SNED1-201ENST00000310397 HTR1DP28221 377 aa11.6□□□□□ -0.55
SNED1-201ENST00000310397 ZBTB34Q8NCN2 500 aa11.6□□□□□ -0.55
SNED1-201ENST00000310397 OR10AD1Q8NGE0 317 aa11.6□□□□□ -0.55
SNED1-201ENST00000310397 SF3B5Q9BWJ5 86 aaKnown RBP11.6□□□□□ -0.55
SNED1-201ENST00000310397 ROS1P08922 2347 aa11.6□□□□□ -0.55
SNED1-201ENST00000310397 M0R1B8 84 aa11.6□□□□□ -0.55
SNED1-201ENST00000310397 ZFP36L2P47974 494 aaKnown RBP11.6□□□□□ -0.55
SNED1-201ENST00000310397 FZD5Q13467 585 aa11.6□□□□□ -0.55
SNED1-201ENST00000310397 SIPA1L1O43166 1804 aa11.59□□□□□ -0.55
SNED1-201ENST00000310397 M0R2Z0 102 aa11.59□□□□□ -0.55
SNED1-201ENST00000310397 CIDEAO60543 219 aa11.59□□□□□ -0.55
SNED1-201ENST00000310397 VSIG8P0DPA2 414 aa11.59□□□□□ -0.55
SNED1-201ENST00000310397 ACSM6Q6P461 480 aa11.59□□□□□ -0.55
SNED1-201ENST00000310397 OR2Z1Q8NG97 314 aa11.59□□□□□ -0.55
SNED1-201ENST00000310397 OR10D3Q8NH80 312 aa11.59□□□□□ -0.55
SNED1-201ENST00000310397 OR1L3Q8NH93 324 aa11.59□□□□□ -0.55
SNED1-201ENST00000310397 MAP1LC3CQ9BXW4 147 aa11.59□□□□□ -0.55
SNED1-201ENST00000310397 TMEM191AQ9H0A3 160 aa11.59□□□□□ -0.55
SNED1-201ENST00000310397 CTXND1A0A1B0GTU2 59 aa11.59□□□□□ -0.55
SNED1-201ENST00000310397 OOEPA6NGQ2 149 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms