RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 ALDOBP05062 364 aa15.65■□□□□ 0.1
LIME1-201ENST00000309546 DCKP27707 260 aa15.65■□□□□ 0.1
LIME1-201ENST00000309546 OR3A4PP47883 348 aa15.65■□□□□ 0.1
LIME1-201ENST00000309546 LRRC36Q1X8D7 754 aa15.65■□□□□ 0.1
LIME1-201ENST00000309546 C17orf58Q2M2W7 97 aa15.65■□□□□ 0.1
LIME1-201ENST00000309546 HLA-DRB5Q30154 266 aa15.65■□□□□ 0.1
LIME1-201ENST00000309546 PIGYQ3MUY2 71 aa15.65■□□□□ 0.1
LIME1-201ENST00000309546 ELP2Q6IA86 826 aa15.65■□□□□ 0.1
LIME1-201ENST00000309546 ZNF529Q6P280 563 aa15.65■□□□□ 0.1
LIME1-201ENST00000309546 CYGBQ8WWM9 190 aa15.65■□□□□ 0.1
LIME1-201ENST00000309546 TRAV24A0A0B4J272 114 aa15.64■□□□□ 0.09
LIME1-201ENST00000309546 HTR3BO95264 441 aa15.64■□□□□ 0.09
LIME1-201ENST00000309546 IGLV1-47P01700 117 aa15.64■□□□□ 0.09
LIME1-201ENST00000309546 MYL12AP19105 171 aa15.64■□□□□ 0.09
LIME1-201ENST00000309546 CD34P28906 385 aa15.64■□□□□ 0.09
LIME1-201ENST00000309546 CEACAM3P40198 252 aa15.64■□□□□ 0.09
LIME1-201ENST00000309546 PRRX1P54821 245 aa15.64■□□□□ 0.09
LIME1-201ENST00000309546 PPP3R1P63098 170 aa15.64■□□□□ 0.09
LIME1-201ENST00000309546 PRKDCP78527 4128 aaKnown RBP15.64■□□□□ 0.09
LIME1-201ENST00000309546 CCDC58Q4VC31 144 aa15.64■□□□□ 0.09
LIME1-201ENST00000309546 UTF1Q5T230 341 aa15.64■□□□□ 0.09
LIME1-201ENST00000309546 TPTE2P1Q5T6R2 138 aa15.64■□□□□ 0.09
LIME1-201ENST00000309546 OR51T1Q8NGJ9 327 aa15.64■□□□□ 0.09
LIME1-201ENST00000309546 OR13A1Q8NGR1 328 aa15.64■□□□□ 0.09
LIME1-201ENST00000309546 TMEM106AQ96A25 262 aa15.64■□□□□ 0.09
LIME1-201ENST00000309546 AKR1E2Q96JD6 320 aa15.64■□□□□ 0.09
LIME1-201ENST00000309546 CITED2Q99967 270 aaPredicted RBP15.64■□□□□ 0.09
LIME1-201ENST00000309546 SLC25A33Q9BSK2 321 aa15.64■□□□□ 0.09
LIME1-201ENST00000309546 ING4Q9UNL4 249 aa15.64■□□□□ 0.09
LIME1-201ENST00000309546 KBTBD11-OT1A0A1B0GTJ5 212 aa15.63■□□□□ 0.09
LIME1-201ENST00000309546 IRGMA1A4Y4 181 aa15.63■□□□□ 0.09
LIME1-201ENST00000309546 BUB1B-PAK6H3BSN5 160 aa15.63■□□□□ 0.09
LIME1-201ENST00000309546 CDRT1O95170 752 aa15.63■□□□□ 0.09
LIME1-201ENST00000309546 IL13RA2Q14627 380 aa15.63■□□□□ 0.09
LIME1-201ENST00000309546 LTC4SQ16873 150 aa15.63■□□□□ 0.09
LIME1-201ENST00000309546 FBLN7Q53RD9 439 aa15.63■□□□□ 0.09
LIME1-201ENST00000309546 DDI2Q5TDH0 399 aa15.63■□□□□ 0.09
LIME1-201ENST00000309546 C16orf82Q7Z2V1 217 aa15.63■□□□□ 0.09
LIME1-201ENST00000309546 OR13C5Q8NGS8 318 aa15.63■□□□□ 0.09
LIME1-201ENST00000309546 CREB3L1Q96BA8 519 aa15.63■□□□□ 0.09
LIME1-201ENST00000309546 ORAI1Q96D31 301 aa15.63■□□□□ 0.09
LIME1-201ENST00000309546 R3HDM4Q96D70 268 aa15.63■□□□□ 0.09
LIME1-201ENST00000309546 KIRREL1Q96J84 757 aa15.63■□□□□ 0.09
LIME1-201ENST00000309546 BARHL1Q9BZE3 327 aa15.63■□□□□ 0.09
LIME1-201ENST00000309546 WNT10AQ9GZT5 417 aa15.63■□□□□ 0.09
LIME1-201ENST00000309546 MMP28Q9H239 520 aa15.63■□□□□ 0.09
LIME1-201ENST00000309546 CALYQ9NYX4 217 aa15.63■□□□□ 0.09
LIME1-201ENST00000309546 SIRT4Q9Y6E7 314 aaPredicted RBP15.63■□□□□ 0.09
LIME1-201ENST00000309546 A0A087X0M5 115 aa15.62■□□□□ 0.09
LIME1-201ENST00000309546 A0A1B0GX30 115 aa15.62■□□□□ 0.09
LIME1-201ENST00000309546 IGHV3-7P01780 117 aa15.62■□□□□ 0.09
LIME1-201ENST00000309546 NDUFA11Q86Y39 141 aa15.62■□□□□ 0.09
LIME1-201ENST00000309546 ZNF565Q8N9K5 539 aa15.62■□□□□ 0.09
LIME1-201ENST00000309546 OR9G1Q8NH87 305 aa15.62■□□□□ 0.09
LIME1-201ENST00000309546 PLPPR1Q8TBJ4 325 aa15.62■□□□□ 0.09
LIME1-201ENST00000309546 MRGPRDQ8TDS7 321 aa15.62■□□□□ 0.09
LIME1-201ENST00000309546 WIPF2Q8TF74 440 aaPredicted RBP15.62■□□□□ 0.09
LIME1-201ENST00000309546 LEAP2Q969E1 77 aa15.62■□□□□ 0.09
LIME1-201ENST00000309546 SMIM19Q96E16 107 aa15.62■□□□□ 0.09
LIME1-201ENST00000309546 LIN7BQ9HAP6 207 aa15.62■□□□□ 0.09
LIME1-201ENST00000309546 TMEM138Q9NPI0 162 aa15.62■□□□□ 0.09
LIME1-201ENST00000309546 DIMT1Q9UNQ2 313 aaKnown RBP15.62■□□□□ 0.09
LIME1-201ENST00000309546 EXOSC1Q9Y3B2 195 aaKnown RBP15.62■□□□□ 0.09
LIME1-201ENST00000309546 A0A1W2PRX2 142 aa15.61■□□□□ 0.09
LIME1-201ENST00000309546 SH2D7A6NKC9 451 aaPredicted RBP15.61■□□□□ 0.09
LIME1-201ENST00000309546 OR2F2O95006 317 aa15.61■□□□□ 0.09
LIME1-201ENST00000309546 CSTBP04080 98 aaKnown RBP15.61■□□□□ 0.09
LIME1-201ENST00000309546 SERPINA2P20848 420 aa15.61■□□□□ 0.09
LIME1-201ENST00000309546 C21orf33P30042 268 aaPredicted RBP15.61■□□□□ 0.09
LIME1-201ENST00000309546 BDKRB2P30411 391 aa15.61■□□□□ 0.09
LIME1-201ENST00000309546 ZNF93P35789 620 aaPredicted RBP15.61■□□□□ 0.09
LIME1-201ENST00000309546 MNDAP41218 407 aa15.61■□□□□ 0.09
LIME1-201ENST00000309546 EMX1Q04741 257 aaPredicted RBP15.61■□□□□ 0.09
LIME1-201ENST00000309546 ABCA11PQ4W5N1 156 aa15.61■□□□□ 0.09
LIME1-201ENST00000309546 RSBN1Q5VWQ0 802 aaPredicted RBP15.61■□□□□ 0.09
LIME1-201ENST00000309546 SETD9Q8NE22 299 aa15.61■□□□□ 0.09
LIME1-201ENST00000309546 OR4F17Q8NGA8 305 aa15.61■□□□□ 0.09
LIME1-201ENST00000309546 TOMM40LQ969M1 308 aa15.61■□□□□ 0.09
LIME1-201ENST00000309546 RPEQ96AT9 228 aa15.61■□□□□ 0.09
LIME1-201ENST00000309546 OR4F4Q96R69 305 aa15.61■□□□□ 0.09
LIME1-201ENST00000309546 S100A13Q99584 98 aa15.61■□□□□ 0.09
LIME1-201ENST00000309546 OCSTAMPQ9BR26 566 aa15.61■□□□□ 0.09
LIME1-201ENST00000309546 METTL9Q9H1A3 318 aa15.61■□□□□ 0.09
LIME1-201ENST00000309546 CHCHD3Q9NX63 227 aaKnown RBP15.61■□□□□ 0.09
LIME1-201ENST00000309546 BABAM2Q9NXR7 383 aa15.61■□□□□ 0.09
LIME1-201ENST00000309546 IDI2-AS1Q9NZ38 188 aa15.61■□□□□ 0.09
LIME1-201ENST00000309546 ZNF581Q9P0T4 197 aa15.61■□□□□ 0.09
LIME1-201ENST00000309546 CLEC2DQ9UHP7 191 aa15.61■□□□□ 0.09
LIME1-201ENST00000309546 ST3GAL6Q9Y274 331 aa15.61■□□□□ 0.09
LIME1-201ENST00000309546 ZNF281Q9Y2X9 895 aa15.61■□□□□ 0.09
LIME1-201ENST00000309546 TRAV39A0A0B4J263 110 aa15.6■□□□□ 0.09
LIME1-201ENST00000309546 OR7C1O76099 320 aaPredicted RBP15.6■□□□□ 0.09
LIME1-201ENST00000309546 LALBAP00709 142 aa15.6■□□□□ 0.09
LIME1-201ENST00000309546 IL1AP01583 271 aa15.6■□□□□ 0.09
LIME1-201ENST00000309546 LPLP06858 475 aa15.6■□□□□ 0.09
LIME1-201ENST00000309546 GNG10P50151 68 aa15.6■□□□□ 0.09
LIME1-201ENST00000309546 MED21Q13503 144 aa15.6■□□□□ 0.09
LIME1-201ENST00000309546 BEAN1Q3B7T3 259 aa15.6■□□□□ 0.09
LIME1-201ENST00000309546 C9orf152Q5JTZ5 239 aa15.6■□□□□ 0.09
LIME1-201ENST00000309546 SAMD5Q5TGI4 173 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms