RNA–Protein interactions for RNA: ENST00000308482.13

LRRFIP1-203, Transcript of LRR binding FLII interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRRFIP1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-203ENST00000308482 TIAF1O95411 115 aa12.45□□□□□ -0.42
LRRFIP1-203ENST00000308482 CD38P28907 300 aa12.45□□□□□ -0.42
LRRFIP1-203ENST00000308482 UCP3P55916 312 aa12.45□□□□□ -0.42
LRRFIP1-203ENST00000308482 LCN15Q6UWW0 184 aa12.45□□□□□ -0.42
LRRFIP1-203ENST00000308482 RNF138Q8WVD3 245 aa12.45□□□□□ -0.42
LRRFIP1-203ENST00000308482 SPSB1Q96BD6 273 aa12.45□□□□□ -0.42
LRRFIP1-203ENST00000308482 RSG1Q9BU20 258 aa12.45□□□□□ -0.42
LRRFIP1-203ENST00000308482 CHD3Q12873 2000 aaKnown RBP12.45□□□□□ -0.42
LRRFIP1-203ENST00000308482 ZNF407Q9C0G0 2248 aa12.45□□□□□ -0.42
LRRFIP1-203ENST00000308482 DHHO43323 396 aa12.45□□□□□ -0.42
LRRFIP1-203ENST00000308482 MSX1P28360 303 aa12.45□□□□□ -0.42
LRRFIP1-203ENST00000308482 TLE4Q04727 773 aa12.45□□□□□ -0.42
LRRFIP1-203ENST00000308482 DAZAP2Q15038 168 aaPredicted RBP12.45□□□□□ -0.42
LRRFIP1-203ENST00000308482 IZUMO4Q1ZYL8 232 aa12.45□□□□□ -0.42
LRRFIP1-203ENST00000308482 KIAA2026Q5HYC2 2103 aa12.45□□□□□ -0.42
LRRFIP1-203ENST00000308482 ZNF774Q6NX45 483 aa12.45□□□□□ -0.42
LRRFIP1-203ENST00000308482 GAPTQ8N292 157 aa12.45□□□□□ -0.42
LRRFIP1-203ENST00000308482 PLPPR1Q8TBJ4 325 aa12.45□□□□□ -0.42
LRRFIP1-203ENST00000308482 RBMXL1Q96E39 390 aaKnown RBP12.45□□□□□ -0.42
LRRFIP1-203ENST00000308482 GNPNAT1Q96EK6 184 aaPredicted RBP12.45□□□□□ -0.42
LRRFIP1-203ENST00000308482 MYOTQ9UBF9 498 aa12.45□□□□□ -0.42
LRRFIP1-203ENST00000308482 IGKV1D-13A0A0B4J2D9 117 aa12.44□□□□□ -0.42
LRRFIP1-203ENST00000308482 C9J4A7 227 aa12.44□□□□□ -0.42
LRRFIP1-203ENST00000308482 CLDN34H7C241 214 aa12.44□□□□□ -0.42
LRRFIP1-203ENST00000308482 LCATP04180 440 aa12.44□□□□□ -0.42
LRRFIP1-203ENST00000308482 IGKV1-13P0DP09 117 aa12.44□□□□□ -0.42
LRRFIP1-203ENST00000308482 FAM180AQ6UWF9 173 aa12.44□□□□□ -0.42
LRRFIP1-203ENST00000308482 Q6ZSR3 168 aa12.44□□□□□ -0.42
LRRFIP1-203ENST00000308482 SSX7Q7RTT5 188 aa12.44□□□□□ -0.42
LRRFIP1-203ENST00000308482 SPTSSAQ969W0 71 aa12.44□□□□□ -0.42
LRRFIP1-203ENST00000308482 POM121Q96HA1 1249 aa12.44□□□□□ -0.42
LRRFIP1-203ENST00000308482 CA14Q9ULX7 337 aa12.44□□□□□ -0.42
LRRFIP1-203ENST00000308482 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.44□□□□□ -0.42
LRRFIP1-203ENST00000308482 A0A1B0GU03 582 aa12.44□□□□□ -0.42
LRRFIP1-203ENST00000308482 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.44□□□□□ -0.42
LRRFIP1-203ENST00000308482 APLNRP35414 380 aa12.44□□□□□ -0.42
LRRFIP1-203ENST00000308482 NPBWR2P48146 333 aa12.44□□□□□ -0.42
LRRFIP1-203ENST00000308482 PAX9P55771 341 aa12.44□□□□□ -0.42
LRRFIP1-203ENST00000308482 TMEM267Q0VDI3 215 aaPredicted RBP12.44□□□□□ -0.42
LRRFIP1-203ENST00000308482 WDR25Q64LD2 544 aaPredicted RBP12.44□□□□□ -0.42
LRRFIP1-203ENST00000308482 TMEM56Q96MV1 263 aa12.44□□□□□ -0.42
LRRFIP1-203ENST00000308482 CABLES2Q9BTV7 478 aa12.44□□□□□ -0.42
LRRFIP1-203ENST00000308482 MTCH2Q9Y6C9 303 aa12.44□□□□□ -0.42
LRRFIP1-203ENST00000308482 TMEM56-RWDD3S4R434 201 aa12.44□□□□□ -0.42
LRRFIP1-203ENST00000308482 LMO7DNF2Z398 122 aa12.43□□□□□ -0.42
LRRFIP1-203ENST00000308482 PDCD6O75340 191 aa12.43□□□□□ -0.42
LRRFIP1-203ENST00000308482 NRASP01111 189 aa12.43□□□□□ -0.42
LRRFIP1-203ENST00000308482 IGLV3-19P01714 112 aa12.43□□□□□ -0.42
LRRFIP1-203ENST00000308482 GZMBP10144 247 aa12.43□□□□□ -0.42
LRRFIP1-203ENST00000308482 TAS2R30P59541 319 aa12.43□□□□□ -0.42
LRRFIP1-203ENST00000308482 HIST1H3AP68431 136 aa12.43□□□□□ -0.42
LRRFIP1-203ENST00000308482 MALLQ13021 153 aa12.43□□□□□ -0.42
LRRFIP1-203ENST00000308482 USF2Q15853 346 aaPredicted RBP12.43□□□□□ -0.42
LRRFIP1-203ENST00000308482 SSX2Q16385 188 aa12.43□□□□□ -0.42
LRRFIP1-203ENST00000308482 C10orf128Q5T292 105 aa12.43□□□□□ -0.42
LRRFIP1-203ENST00000308482 PLXDC1Q8IUK5 500 aa12.43□□□□□ -0.42
LRRFIP1-203ENST00000308482 NECAP1Q8NC96 275 aa12.43□□□□□ -0.42
LRRFIP1-203ENST00000308482 OR4X1Q8NH49 305 aa12.43□□□□□ -0.42
LRRFIP1-203ENST00000308482 RPRMQ9NS64 109 aa12.43□□□□□ -0.42
LRRFIP1-203ENST00000308482 A0A1W2PR77 199 aa12.43□□□□□ -0.42
LRRFIP1-203ENST00000308482 ZNHIT1O43257 154 aa12.43□□□□□ -0.42
LRRFIP1-203ENST00000308482 SCTP09683 121 aa12.43□□□□□ -0.42
LRRFIP1-203ENST00000308482 TCN2P20062 427 aa12.43□□□□□ -0.42
LRRFIP1-203ENST00000308482 CLEC12BQ2HXU8 276 aa12.43□□□□□ -0.42
LRRFIP1-203ENST00000308482 CALHM1Q8IU99 346 aa12.43□□□□□ -0.42
LRRFIP1-203ENST00000308482 TGIF2LXQ8IUE1 241 aa12.43□□□□□ -0.42
LRRFIP1-203ENST00000308482 ZNF664Q8N3J9 261 aa12.43□□□□□ -0.42
LRRFIP1-203ENST00000308482 TMEM54Q969K7 222 aa12.43□□□□□ -0.42
LRRFIP1-203ENST00000308482 C10orf35Q96D05 121 aa12.43□□□□□ -0.42
LRRFIP1-203ENST00000308482 CDCA3Q99618 268 aaPredicted RBP12.43□□□□□ -0.42
LRRFIP1-203ENST00000308482 ATP5SQ99766 215 aa12.43□□□□□ -0.42
LRRFIP1-203ENST00000308482 ULBP2Q9BZM5 246 aa12.43□□□□□ -0.42
LRRFIP1-203ENST00000308482 FAM86C1Q9NVL1 165 aa12.43□□□□□ -0.42
LRRFIP1-203ENST00000308482 ARHGAP21Q5T5U3 1957 aa12.43□□□□□ -0.42
LRRFIP1-203ENST00000308482 A0A0G2JRQ6 117 aa12.42□□□□□ -0.42
LRRFIP1-203ENST00000308482 ARGFXA6NJG6 315 aa12.42□□□□□ -0.42
LRRFIP1-203ENST00000308482 G3V3Y1 287 aa12.42□□□□□ -0.42
LRRFIP1-203ENST00000308482 HSPB6O14558 160 aa12.42□□□□□ -0.42
LRRFIP1-203ENST00000308482 CYB5R3P00387 301 aaPredicted RBP12.42□□□□□ -0.42
LRRFIP1-203ENST00000308482 AMBPP02760 352 aa12.42□□□□□ -0.42
LRRFIP1-203ENST00000308482 CRYGSP22914 178 aa12.42□□□□□ -0.42
LRRFIP1-203ENST00000308482 RND2P52198 227 aa12.42□□□□□ -0.42
LRRFIP1-203ENST00000308482 RPS18P62269 152 aaKnown RBP12.42□□□□□ -0.42
LRRFIP1-203ENST00000308482 H3F3AP84243 136 aa12.42□□□□□ -0.42
LRRFIP1-203ENST00000308482 ID3Q02535 119 aa12.42□□□□□ -0.42
LRRFIP1-203ENST00000308482 CNN3Q15417 329 aaKnown RBP12.42□□□□□ -0.42
LRRFIP1-203ENST00000308482 EXT1Q16394 746 aa12.42□□□□□ -0.42
LRRFIP1-203ENST00000308482 NMSQ5H8A3 153 aa12.42□□□□□ -0.42
LRRFIP1-203ENST00000308482 ZNF468Q5VIY5 522 aaPredicted RBP12.42□□□□□ -0.42
LRRFIP1-203ENST00000308482 SLC25A24Q6NUK1 477 aa12.42□□□□□ -0.42
LRRFIP1-203ENST00000308482 RNASE11Q8TAA1 199 aaKnown RBP12.42□□□□□ -0.42
LRRFIP1-203ENST00000308482 SPIN2AQ99865 258 aa12.42□□□□□ -0.42
LRRFIP1-203ENST00000308482 SPIN2BQ9BPZ2 258 aa12.42□□□□□ -0.42
LRRFIP1-203ENST00000308482 MTIF3Q9H2K0 278 aaKnown RBP12.42□□□□□ -0.42
LRRFIP1-203ENST00000308482 LRFN1Q9P244 771 aa12.42□□□□□ -0.42
LRRFIP1-203ENST00000308482 IGLV3-32A0A0A0MS00 114 aa12.42□□□□□ -0.42
LRRFIP1-203ENST00000308482 NPIPA2E9PIF3 369 aa12.42□□□□□ -0.42
LRRFIP1-203ENST00000308482 NPIPA3F8WFD2 350 aa12.42□□□□□ -0.42
LRRFIP1-203ENST00000308482 HBE1P02100 147 aa12.42□□□□□ -0.42
LRRFIP1-203ENST00000308482 ZNF726P1Q15940 193 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms