RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 PPP3CBP16298 524 aa10.05□□□□□ -0.8
TRIM40-205ENST00000307859 AKR1C4P17516 323 aa10.05□□□□□ -0.8
TRIM40-205ENST00000307859 HLA-GP17693 338 aa10.05□□□□□ -0.8
TRIM40-205ENST00000307859 DNASE1P24855 282 aa10.05□□□□□ -0.8
TRIM40-205ENST00000307859 CD200P41217 278 aa10.05□□□□□ -0.8
TRIM40-205ENST00000307859 RPS23P62266 143 aaKnown RBP10.05□□□□□ -0.8
TRIM40-205ENST00000307859 IL13RA1P78552 427 aa10.05□□□□□ -0.8
TRIM40-205ENST00000307859 MZT1Q08AG7 82 aa10.05□□□□□ -0.8
TRIM40-205ENST00000307859 RBM39Q14498 530 aaKnown RBP10.05□□□□□ -0.8
TRIM40-205ENST00000307859 SPIN3Q5JUX0 258 aa10.05□□□□□ -0.8
TRIM40-205ENST00000307859 LY6G6FQ5SQ64 297 aa10.05□□□□□ -0.8
TRIM40-205ENST00000307859 DCAF12L2Q5VW00 463 aa10.05□□□□□ -0.8
TRIM40-205ENST00000307859 ALKBH2Q6NS38 261 aa10.05□□□□□ -0.8
TRIM40-205ENST00000307859 LPCAT3Q6P1A2 487 aa10.05□□□□□ -0.8
TRIM40-205ENST00000307859 UXS1Q8NBZ7 420 aa10.05□□□□□ -0.8
TRIM40-205ENST00000307859 ST6GALNAC3Q8NDV1 305 aa10.05□□□□□ -0.8
TRIM40-205ENST00000307859 DPCDQ9BVM2 203 aaPredicted RBP10.05□□□□□ -0.8
TRIM40-205ENST00000307859 CHIAQ9BZP6 476 aa10.05□□□□□ -0.8
TRIM40-205ENST00000307859 LIME1Q9H400 295 aa10.05□□□□□ -0.8
TRIM40-205ENST00000307859 CHMP1AQ9HD42 196 aaPredicted RBP10.05□□□□□ -0.8
TRIM40-205ENST00000307859 OPN4Q9UHM6 478 aa10.05□□□□□ -0.8
TRIM40-205ENST00000307859 POM121CA8CG34 1229 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 C3orf80F5H4A9 247 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 RGS13O14921 159 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 DEGS1O15121 323 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 NXPH2O95156 264 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 SFT2D2O95562 160 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 GSTT2P0CG29 244 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 MDH2P40926 338 aaKnown RBP10.04□□□□□ -0.8
TRIM40-205ENST00000307859 CA7P43166 264 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 KLF3P57682 345 aaPredicted RBP10.04□□□□□ -0.8
TRIM40-205ENST00000307859 SRSF4Q08170 494 aaKnown RBP10.04□□□□□ -0.8
TRIM40-205ENST00000307859 Q5BKY6 102 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 ZNF880Q6PDB4 577 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 WDR82Q6UXN9 313 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 LRP11Q86VZ4 500 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 NUP37Q8NFH4 326 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 OR5M8Q8NGP6 311 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 MRPL30Q8TCC3 161 aaKnown RBP10.04□□□□□ -0.8
TRIM40-205ENST00000307859 NEK7Q8TDX7 302 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 PHB2Q99623 299 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 FXYD6Q9H0Q3 95 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 WDR13Q9H1Z4 485 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 TREM2Q9NZC2 230 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 MGAT4AQ9UM21 535 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 KIAA2026Q5HYC2 2103 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 UTP20O75691 2785 aaKnown RBP10.04□□□□□ -0.8
TRIM40-205ENST00000307859 A0A0B4J2A0 478 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 TRGV8A0A0C4DH27 118 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 A1L4Q6 167 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 DBX1A6NMT0 343 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 SLC33A1O00400 549 aaPredicted RBP10.04□□□□□ -0.8
TRIM40-205ENST00000307859 HSPB6O14558 160 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 RGS11O94810 467 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 SIX6O95475 246 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 OR2H2O95918 312 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 THBDP07204 575 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 CTSDP07339 412 aaPredicted RBP10.04□□□□□ -0.8
TRIM40-205ENST00000307859 ZNF44P15621 663 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 RPS2P15880 293 aaKnown RBP10.04□□□□□ -0.8
TRIM40-205ENST00000307859 VAMP1P23763 118 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 PTAFRP25105 342 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 CASP6P55212 293 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 SUPT4H1P63272 117 aaKnown RBP10.04□□□□□ -0.8
TRIM40-205ENST00000307859 BAMBIQ13145 260 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 PRAMEF6Q5VXH4 476 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 FIP1L1Q6UN15 594 aaKnown RBP10.04□□□□□ -0.8
TRIM40-205ENST00000307859 TMEM108Q6UXF1 575 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 ZNF826PQ6ZT77 177 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 RDH5Q92781 318 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 MOB3AQ96BX8 217 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 WDR89Q96FK6 387 aaPredicted RBP10.04□□□□□ -0.8
TRIM40-205ENST00000307859 TMEM246Q9BRR3 403 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 TMPRSS13Q9BYE2 586 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 SLC23A1Q9UHI7 598 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 SHPKQ9UHJ6 478 aa10.04□□□□□ -0.8
TRIM40-205ENST00000307859 PAIP2BQ9ULR5 123 aaKnown RBP10.04□□□□□ -0.8
TRIM40-205ENST00000307859 F8P00451 2351 aa10.03□□□□□ -0.8
TRIM40-205ENST00000307859 IGHV3-64DA0A0J9YX35 117 aa10.03□□□□□ -0.8
TRIM40-205ENST00000307859 KIR2DS1A0A191URI9 304 aa10.03□□□□□ -0.8
TRIM40-205ENST00000307859 ZSCAN5BA6NJL1 495 aa10.03□□□□□ -0.8
TRIM40-205ENST00000307859 A6NLC8 198 aa10.03□□□□□ -0.8
TRIM40-205ENST00000307859 HS3ST1O14792 307 aa10.03□□□□□ -0.8
TRIM40-205ENST00000307859 SH2D1BO14796 132 aa10.03□□□□□ -0.8
TRIM40-205ENST00000307859 PGAM2P15259 253 aa10.03□□□□□ -0.8
TRIM40-205ENST00000307859 PI3P19957 117 aa10.03□□□□□ -0.8
TRIM40-205ENST00000307859 GNLYP22749 145 aa10.03□□□□□ -0.8
TRIM40-205ENST00000307859 GLRA1P23415 457 aa10.03□□□□□ -0.8
TRIM40-205ENST00000307859 GRNP28799 593 aaKnown RBP10.03□□□□□ -0.8
TRIM40-205ENST00000307859 GLP1RP43220 463 aa10.03□□□□□ -0.8
TRIM40-205ENST00000307859 KIR2DS4P43632 304 aa10.03□□□□□ -0.8
TRIM40-205ENST00000307859 UQCRFS1P47985 274 aa10.03□□□□□ -0.8
TRIM40-205ENST00000307859 UCP3P55916 312 aa10.03□□□□□ -0.8
TRIM40-205ENST00000307859 KIR2DS1Q14954 304 aa10.03□□□□□ -0.8
TRIM40-205ENST00000307859 C11orf88Q6PI97 169 aa10.03□□□□□ -0.8
TRIM40-205ENST00000307859 ACP7Q6ZNF0 438 aa10.03□□□□□ -0.8
TRIM40-205ENST00000307859 GAPTQ8N292 157 aa10.03□□□□□ -0.8
TRIM40-205ENST00000307859 DUSP13Q9UII6 198 aa10.03□□□□□ -0.8
TRIM40-205ENST00000307859 C14orf166Q9Y224 244 aaKnown RBP10.03□□□□□ -0.8
TRIM40-205ENST00000307859 HSPB11Q9Y547 144 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms