RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 SCGB1D4Q6XE38 83 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 NANOGP1Q8N7R0 232 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 CMBLQ96DG6 245 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 LYRM2Q9NU23 88 aaPredicted RBP7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 RABAC1Q9UI14 185 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 TNXAQ16473 311 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 UNQ9370/PRO34162Q6UXP9 181 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 DUSP18Q8NEJ0 188 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 OR2G2Q8NGZ5 317 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 ADGRL4Q9HBW9 690 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 ZDHHC8Q9ULC8 765 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 FAM157AC9JC47 383 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 BMPR1BO00238 502 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 CTDSP2O14595 271 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 HMGA2P52926 109 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 ZBTB37Q5TC79 503 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 TMEM99Q8N816 258 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 LRRC29Q8WV35 223 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 MCHR2Q969V1 340 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 C4orf45Q96LM5 186 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 SH2D2AQ9NP31 389 aa7.36□□□□□ -1.23
PCDHB1-201ENST00000306549 SONP18583 2426 aaKnown RBP7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 LIPT2A6NK58 231 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 FCGR3BO75015 233 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 SKP2Q13309 424 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 COL19A1Q14993 1142 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 TGIF2LXQ8IUE1 241 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 OR10V1Q8NGI7 309 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 RAB40CQ96S21 281 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 ANGPTL4Q9BY76 406 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 PRR19A6NJB7 356 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 SS18L1O75177 396 aaPredicted RBP7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 VDAC1P21796 283 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 CCR6P51684 374 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 AMMECR1LQ6DCA0 310 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 LAMTOR1Q6IAA8 161 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 HGDQ93099 445 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 SLC25A22Q9H936 323 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 MED29Q9NX70 200 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 MRPS16Q9Y3D3 137 aaKnown RBP7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 HELTA6NFD8 242 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 NPIPB6E9PJ23 425 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 LYZL6O75951 148 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 MYF5P13349 255 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 JUNBP17275 347 aaPredicted RBP7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 PTGFRP43088 359 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 PMP22Q01453 160 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 FAM214BQ7L5A3 538 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 SYT8Q8NBV8 401 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 AKR7LQ8NHP1 331 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 TIMP4Q99727 224 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 SEC11CQ9BY50 192 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 A0A0B4J293 547 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 SLC2A10O95528 541 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 HRH1P35367 487 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 GP2P55259 537 aaKnown RBP7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 CD226Q15762 336 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 FFAR4Q5NUL3 377 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 WDR73Q6P4I2 378 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 SLC26A10Q8NG04 563 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 ARHGAP21Q5T5U3 1957 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 TMPRSS2O15393 492 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 ICMTO60725 284 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 CXorf67Q86X51 503 aaPredicted RBP7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 OR10C1Q96KK4 312 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 SLC22A13Q9Y226 551 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 VSIG4Q9Y279 399 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 FAM221AA4D161 298 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 HIST1H1BP16401 226 aaKnown RBP7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 ZNF658BQ4V348 819 aaPredicted RBP7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 SLC25A46Q96AG3 418 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 PACRGQ96M98 296 aaPredicted RBP7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 VAMP8Q9BV40 100 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 SLC25A32Q9H2D1 315 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 PCDH15Q96QU1 1955 aa7.35□□□□□ -1.23
PCDHB1-201ENST00000306549 CDRT15L2A8MXV6 281 aa7.34□□□□□ -1.23
PCDHB1-201ENST00000306549 TAGLNQ01995 201 aaKnown RBP7.34□□□□□ -1.23
PCDHB1-201ENST00000306549 REC114Q7Z4M0 266 aa7.34□□□□□ -1.23
PCDHB1-201ENST00000306549 TGIF2LYQ8IUE0 185 aa7.34□□□□□ -1.23
PCDHB1-201ENST00000306549 FAAP24Q9BTP7 215 aa7.34□□□□□ -1.23
PCDHB1-201ENST00000306549 PILRAQ9UKJ1 303 aa7.34□□□□□ -1.23
PCDHB1-201ENST00000306549 CD37P11049 281 aa7.34□□□□□ -1.23
PCDHB1-201ENST00000306549 ASCL1P50553 236 aa7.34□□□□□ -1.23
PCDHB1-201ENST00000306549 TAS2R60P59551 318 aa7.34□□□□□ -1.23
PCDHB1-201ENST00000306549 GAMTQ14353 236 aa7.34□□□□□ -1.23
PCDHB1-201ENST00000306549 RHOUQ7L0Q8 258 aa7.34□□□□□ -1.23
PCDHB1-201ENST00000306549 OR1B1Q8NGR6 318 aa7.34□□□□□ -1.23
PCDHB1-201ENST00000306549 ZNF552Q9H707 407 aaPredicted RBP7.34□□□□□ -1.23
PCDHB1-201ENST00000306549 A0A1W2PPQ1 181 aa7.34□□□□□ -1.23
PCDHB1-201ENST00000306549 A0A1W2PS18 150 aa7.34□□□□□ -1.23
PCDHB1-201ENST00000306549 GYPAP02724 150 aa7.34□□□□□ -1.23
PCDHB1-201ENST00000306549 BCL3P20749 454 aa7.34□□□□□ -1.23
PCDHB1-201ENST00000306549 UBE2MP61081 183 aaKnown RBP7.34□□□□□ -1.23
PCDHB1-201ENST00000306549 NIPSNAP1Q9BPW8 284 aa7.34□□□□□ -1.23
PCDHB1-201ENST00000306549 ASB1Q9Y576 335 aa7.34□□□□□ -1.23
PCDHB1-201ENST00000306549 MYO18BQ8IUG5 2567 aa7.34□□□□□ -1.23
PCDHB1-201ENST00000306549 SOX15O60248 233 aa7.34□□□□□ -1.23
PCDHB1-201ENST00000306549 CFHR1Q03591 330 aa7.34□□□□□ -1.23
PCDHB1-201ENST00000306549 ZP4Q12836 540 aa7.34□□□□□ -1.23
PCDHB1-201ENST00000306549 ATP6V1FQ16864 119 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms