RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 POC1AQ8NBT0 407 aa9.53□□□□□ -0.88
LSM3-201ENST00000306024 SCGB1C1Q8TD33 95 aa9.53□□□□□ -0.88
LSM3-201ENST00000306024 MRPL24Q96A35 216 aaKnown RBP9.53□□□□□ -0.88
LSM3-201ENST00000306024 GPR132Q9UNW8 380 aa9.53□□□□□ -0.88
LSM3-201ENST00000306024 ANKUB1A6NFN9 424 aa9.52□□□□□ -0.88
LSM3-201ENST00000306024 IFNA1P01562 189 aa9.52□□□□□ -0.88
LSM3-201ENST00000306024 HPNP05981 417 aa9.52□□□□□ -0.88
LSM3-201ENST00000306024 BLVRBP30043 206 aaPredicted RBP9.52□□□□□ -0.88
LSM3-201ENST00000306024 APOBEC1P41238 236 aaKnown RBP9.52□□□□□ -0.88
LSM3-201ENST00000306024 P2RY1P47900 373 aa9.52□□□□□ -0.88
LSM3-201ENST00000306024 GLIPR1P48060 266 aa9.52□□□□□ -0.88
LSM3-201ENST00000306024 TMEM41BQ5BJD5 291 aa9.52□□□□□ -0.88
LSM3-201ENST00000306024 TMEM268Q5VZI3 342 aa9.52□□□□□ -0.88
LSM3-201ENST00000306024 LCN15Q6UWW0 184 aa9.52□□□□□ -0.88
LSM3-201ENST00000306024 KCNG3Q8TAE7 436 aa9.52□□□□□ -0.88
LSM3-201ENST00000306024 MS4A10Q96PG2 267 aa9.52□□□□□ -0.88
LSM3-201ENST00000306024 ZNF2Q9BSG1 426 aaPredicted RBP9.52□□□□□ -0.88
LSM3-201ENST00000306024 A0A1W2PNR3 127 aa9.52□□□□□ -0.89
LSM3-201ENST00000306024 OPN1MWP04001 364 aa9.52□□□□□ -0.89
LSM3-201ENST00000306024 OPN1MW2P0DN77 364 aa9.52□□□□□ -0.89
LSM3-201ENST00000306024 OPN1MW3P0DN78 364 aa9.52□□□□□ -0.89
LSM3-201ENST00000306024 GZMBP10144 247 aa9.52□□□□□ -0.89
LSM3-201ENST00000306024 ERVFC1-1P60608 527 aa9.52□□□□□ -0.89
LSM3-201ENST00000306024 HERV-K104P61576 105 aa9.52□□□□□ -0.89
LSM3-201ENST00000306024 DMRTC1Q5HYR2 192 aa9.52□□□□□ -0.89
LSM3-201ENST00000306024 SAPCD1Q5SSQ6 148 aa9.52□□□□□ -0.89
LSM3-201ENST00000306024 IL22RA2Q969J5 263 aa9.52□□□□□ -0.89
LSM3-201ENST00000306024 R3HDM4Q96D70 268 aa9.52□□□□□ -0.89
LSM3-201ENST00000306024 CEP295Q9C0D2 2601 aa9.52□□□□□ -0.89
LSM3-201ENST00000306024 CLPSP04118 112 aa9.52□□□□□ -0.89
LSM3-201ENST00000306024 SUMO3P55854 103 aaPredicted RBP9.52□□□□□ -0.89
LSM3-201ENST00000306024 DNM1P34Q6PK57 102 aa9.52□□□□□ -0.89
LSM3-201ENST00000306024 LGI3Q8N145 548 aa9.52□□□□□ -0.89
LSM3-201ENST00000306024 LRRC18Q8N456 261 aa9.52□□□□□ -0.89
LSM3-201ENST00000306024 OR52N4Q8NGI2 321 aa9.52□□□□□ -0.89
LSM3-201ENST00000306024 OIT3Q8WWZ8 545 aa9.52□□□□□ -0.89
LSM3-201ENST00000306024 TXN2Q99757 166 aa9.52□□□□□ -0.89
LSM3-201ENST00000306024 ABHD6Q9BV23 337 aa9.52□□□□□ -0.89
LSM3-201ENST00000306024 KLF13Q9Y2Y9 288 aaPredicted RBP9.52□□□□□ -0.89
LSM3-201ENST00000306024 VPS13AQ96RL7 3174 aa9.52□□□□□ -0.89
LSM3-201ENST00000306024 CBR3O75828 277 aa9.51□□□□□ -0.89
LSM3-201ENST00000306024 ONECUT2O95948 504 aa9.51□□□□□ -0.89
LSM3-201ENST00000306024 AMBPP02760 352 aa9.51□□□□□ -0.89
LSM3-201ENST00000306024 TMEM225BP0DP42 221 aa9.51□□□□□ -0.89
LSM3-201ENST00000306024 MMP16P51512 607 aa9.51□□□□□ -0.89
LSM3-201ENST00000306024 DNM1P46Q6ZS02 220 aa9.51□□□□□ -0.89
LSM3-201ENST00000306024 OR10J5Q8NHC4 309 aa9.51□□□□□ -0.89
LSM3-201ENST00000306024 REEP6Q96HR9 211 aa9.51□□□□□ -0.89
LSM3-201ENST00000306024 SAMD10Q9BYL1 202 aa9.51□□□□□ -0.89
LSM3-201ENST00000306024 FAM221AA4D161 298 aa9.51□□□□□ -0.89
LSM3-201ENST00000306024 GJE1A6NN92 205 aa9.51□□□□□ -0.89
LSM3-201ENST00000306024 HSPB2A8KAH6 182 aa9.51□□□□□ -0.89
LSM3-201ENST00000306024 OR5AC1P0C628 307 aa9.51□□□□□ -0.89
LSM3-201ENST00000306024 ARF1P84077 181 aaKnown RBP9.51□□□□□ -0.89
LSM3-201ENST00000306024 HSPB2Q16082 182 aa9.51□□□□□ -0.89
LSM3-201ENST00000306024 ZNF74Q16587 644 aa9.51□□□□□ -0.89
LSM3-201ENST00000306024 HIKESHIQ53FT3 197 aa9.51□□□□□ -0.89
LSM3-201ENST00000306024 DNLZQ5SXM8 178 aa9.51□□□□□ -0.89
LSM3-201ENST00000306024 THEM4Q5T1C6 240 aa9.51□□□□□ -0.89
LSM3-201ENST00000306024 CARD17Q5XLA6 110 aa9.51□□□□□ -0.89
LSM3-201ENST00000306024 WDR25Q64LD2 544 aaPredicted RBP9.51□□□□□ -0.89
LSM3-201ENST00000306024 POC1BQ8TC44 478 aa9.51□□□□□ -0.89
LSM3-201ENST00000306024 C22orf15Q8WYQ4 148 aa9.51□□□□□ -0.89
LSM3-201ENST00000306024 AQP3Q92482 292 aa9.51□□□□□ -0.89
LSM3-201ENST00000306024 KTI12Q96EK9 354 aaPredicted RBP9.51□□□□□ -0.89
LSM3-201ENST00000306024 MRGPRX4Q96LA9 322 aa9.51□□□□□ -0.89
LSM3-201ENST00000306024 TBX15Q96SF7 602 aa9.51□□□□□ -0.89
LSM3-201ENST00000306024 SYT3Q9BQG1 590 aa9.51□□□□□ -0.89
LSM3-201ENST00000306024 SMDT1Q9H4I9 107 aa9.51□□□□□ -0.89
LSM3-201ENST00000306024 ASCL3Q9NQ33 180 aa9.51□□□□□ -0.89
LSM3-201ENST00000306024 UBE2J1Q9Y385 318 aaPredicted RBP9.51□□□□□ -0.89
LSM3-201ENST00000306024 LRP12Q9Y561 859 aa9.51□□□□□ -0.89
LSM3-201ENST00000306024 FER1L5A0AVI2 2057 aa9.51□□□□□ -0.89
LSM3-201ENST00000306024 NPIPA2E9PIF3 369 aa9.51□□□□□ -0.89
LSM3-201ENST00000306024 NPIPA3F8WFD2 350 aa9.51□□□□□ -0.89
LSM3-201ENST00000306024 DEDDO75618 318 aa9.51□□□□□ -0.89
LSM3-201ENST00000306024 BPNT1O95861 308 aa9.51□□□□□ -0.89
LSM3-201ENST00000306024 PNPP00491 289 aa9.51□□□□□ -0.89
LSM3-201ENST00000306024 GSTP1P09211 210 aaKnown RBP9.51□□□□□ -0.89
LSM3-201ENST00000306024 ZNF43P17038 809 aa9.51□□□□□ -0.89
LSM3-201ENST00000306024 DCXRQ7Z4W1 244 aa9.51□□□□□ -0.89
LSM3-201ENST00000306024 ABHD12BQ7Z5M8 362 aaPredicted RBP9.51□□□□□ -0.89
LSM3-201ENST00000306024 ZADH2Q8N4Q0 377 aa9.51□□□□□ -0.89
LSM3-201ENST00000306024 OR5L1Q8NGL2 311 aa9.51□□□□□ -0.89
LSM3-201ENST00000306024 SMIM7Q9BQ49 75 aa9.51□□□□□ -0.89
LSM3-201ENST00000306024 NICN1Q9BSH3 213 aa9.51□□□□□ -0.89
LSM3-201ENST00000306024 PAM16Q9Y3D7 125 aa9.51□□□□□ -0.89
LSM3-201ENST00000306024 A0A1W2PNU3 283 aaPredicted RBP9.5□□□□□ -0.89
LSM3-201ENST00000306024 CST7O76096 145 aa9.5□□□□□ -0.89
LSM3-201ENST00000306024 FUT3P21217 361 aa9.5□□□□□ -0.89
LSM3-201ENST00000306024 GABRR1P24046 479 aa9.5□□□□□ -0.89
LSM3-201ENST00000306024 GNRHRP30968 328 aa9.5□□□□□ -0.89
LSM3-201ENST00000306024 POU3F1Q03052 451 aaPredicted RBP9.5□□□□□ -0.89
LSM3-201ENST00000306024 C1QL3Q5VWW1 255 aa9.5□□□□□ -0.89
LSM3-201ENST00000306024 ZNF100Q8IYN0 542 aa9.5□□□□□ -0.89
LSM3-201ENST00000306024 ARHGAP5-AS1Q96IT6 56 aa9.5□□□□□ -0.89
LSM3-201ENST00000306024 DNAJC4Q9NNZ3 241 aa9.5□□□□□ -0.89
LSM3-201ENST00000306024 PLEKHJ1Q9NW61 149 aa9.5□□□□□ -0.89
LSM3-201ENST00000306024 FUT9Q9Y231 359 aa9.5□□□□□ -0.89
LSM3-201ENST00000306024 A0A0U1RQK1 487 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms