RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 BMP5P22003 454 aa11.59□□□□□ -0.55
DDX54-201ENST00000306014 SRD5A2P31213 254 aa11.59□□□□□ -0.55
DDX54-201ENST00000306014 ZNF90Q03938 601 aa11.59□□□□□ -0.55
DDX54-201ENST00000306014 UBE2V2Q15819 145 aa11.59□□□□□ -0.55
DDX54-201ENST00000306014 ACOT6Q3I5F7 207 aaPredicted RBP11.59□□□□□ -0.55
DDX54-201ENST00000306014 ACER2Q5QJU3 275 aa11.59□□□□□ -0.55
DDX54-201ENST00000306014 C1QL2Q7Z5L3 287 aa11.59□□□□□ -0.55
DDX54-201ENST00000306014 MSI2Q96DH6 328 aaKnown RBP11.59□□□□□ -0.55
DDX54-201ENST00000306014 GPHA2Q96T91 129 aa11.59□□□□□ -0.55
DDX54-201ENST00000306014 RYDENQ9NUL5 291 aaKnown RBP11.59□□□□□ -0.55
DDX54-201ENST00000306014 A0A1B0GTI1 187 aa11.59□□□□□ -0.55
DDX54-201ENST00000306014 A0A1W2PR80 420 aa11.59□□□□□ -0.55
DDX54-201ENST00000306014 ZNHIT1O43257 154 aa11.59□□□□□ -0.55
DDX54-201ENST00000306014 TRAF3IP2O43734 574 aaPredicted RBP11.59□□□□□ -0.55
DDX54-201ENST00000306014 EIF3GO75821 320 aaKnown RBP eCLIP11.59□□□□□ -0.55
DDX54-201ENST00000306014 CELA2AP08217 269 aa11.59□□□□□ -0.55
DDX54-201ENST00000306014 MGST1P10620 155 aaKnown RBP11.59□□□□□ -0.55
DDX54-201ENST00000306014 SLC25A6P12236 298 aa11.59□□□□□ -0.55
DDX54-201ENST00000306014 ZNF708P17019 499 aa11.59□□□□□ -0.55
DDX54-201ENST00000306014 EPHA8P29322 1005 aaPredicted RBP11.59□□□□□ -0.55
DDX54-201ENST00000306014 IL11RAQ14626 422 aa11.59□□□□□ -0.55
DDX54-201ENST00000306014 TMEM241Q24JQ0 296 aa11.59□□□□□ -0.55
DDX54-201ENST00000306014 POC1AQ8NBT0 407 aa11.59□□□□□ -0.55
DDX54-201ENST00000306014 OR10V1Q8NGI7 309 aa11.59□□□□□ -0.55
DDX54-201ENST00000306014 GALMQ96C23 342 aa11.59□□□□□ -0.55
DDX54-201ENST00000306014 SNX22Q96L94 193 aa11.59□□□□□ -0.55
DDX54-201ENST00000306014 ZNF737O75373 536 aa11.58□□□□□ -0.55
DDX54-201ENST00000306014 BCL3P20749 454 aa11.58□□□□□ -0.55
DDX54-201ENST00000306014 ABHD3Q8WU67 409 aa11.58□□□□□ -0.55
DDX54-201ENST00000306014 ATP5SQ99766 215 aa11.58□□□□□ -0.55
DDX54-201ENST00000306014 PLA2G3Q9NZ20 509 aa11.58□□□□□ -0.55
DDX54-201ENST00000306014 LOXL2Q9Y4K0 774 aa11.58□□□□□ -0.55
DDX54-201ENST00000306014 V9GYS6 101 aa11.58□□□□□ -0.55
DDX54-201ENST00000306014 RALGAPA1Q6GYQ0 2036 aa11.58□□□□□ -0.56
DDX54-201ENST00000306014 GPR12P47775 334 aa11.58□□□□□ -0.56
DDX54-201ENST00000306014 SLC10A1Q14973 349 aa11.58□□□□□ -0.56
DDX54-201ENST00000306014 DHRS7BQ6IAN0 325 aaPredicted RBP11.58□□□□□ -0.56
DDX54-201ENST00000306014 TMEM211Q6ICI0 200 aa11.58□□□□□ -0.56
DDX54-201ENST00000306014 CYB561D1Q8N8Q1 229 aa11.58□□□□□ -0.56
DDX54-201ENST00000306014 SLX1AQ9BQ83 275 aa11.58□□□□□ -0.56
DDX54-201ENST00000306014 PRDM6Q9NQX0 595 aa11.58□□□□□ -0.56
DDX54-201ENST00000306014 A0A0J9YW62 118 aa11.58□□□□□ -0.56
DDX54-201ENST00000306014 TRDCB7Z8K6 153 aa11.58□□□□□ -0.56
DDX54-201ENST00000306014 SYNGR2O43760 224 aa11.58□□□□□ -0.56
DDX54-201ENST00000306014 CCL4P13236 92 aa11.58□□□□□ -0.56
DDX54-201ENST00000306014 IGFBP3P17936 291 aaPredicted RBP11.58□□□□□ -0.56
DDX54-201ENST00000306014 MST1P26927 711 aa11.58□□□□□ -0.56
DDX54-201ENST00000306014 PPP1CCP36873 323 aaKnown RBP11.58□□□□□ -0.56
DDX54-201ENST00000306014 FABP6P51161 128 aa11.58□□□□□ -0.56
DDX54-201ENST00000306014 RFESDQ8TAC1 157 aa11.58□□□□□ -0.56
DDX54-201ENST00000306014 REG4Q9BYZ8 158 aa11.58□□□□□ -0.56
DDX54-201ENST00000306014 SH3BGRL3Q9H299 93 aa11.58□□□□□ -0.56
DDX54-201ENST00000306014 ZMAT5Q9UDW3 170 aaKnown RBP11.58□□□□□ -0.56
DDX54-201ENST00000306014 SCN8AQ9UQD0 1980 aa11.58□□□□□ -0.56
DDX54-201ENST00000306014 CRYM-AS1A6NIL9 109 aa11.58□□□□□ -0.56
DDX54-201ENST00000306014 M0R296 226 aa11.58□□□□□ -0.56
DDX54-201ENST00000306014 MELTFP08582 738 aa11.58□□□□□ -0.56
DDX54-201ENST00000306014 TMEM50BP56557 158 aa11.58□□□□□ -0.56
DDX54-201ENST00000306014 STPG1Q5TH74 334 aa11.58□□□□□ -0.56
DDX54-201ENST00000306014 GCNT2Q8N0V5 402 aa11.58□□□□□ -0.56
DDX54-201ENST00000306014 FER1L6-AS2Q96M78 137 aa11.58□□□□□ -0.56
DDX54-201ENST00000306014 CIB3Q96Q77 187 aaPredicted RBP11.58□□□□□ -0.56
DDX54-201ENST00000306014 OR2H1Q9GZK4 316 aa11.58□□□□□ -0.56
DDX54-201ENST00000306014 TMEM38BQ9NVV0 291 aa11.58□□□□□ -0.56
DDX54-201ENST00000306014 RPH3ALQ9UNE2 315 aa11.58□□□□□ -0.56
DDX54-201ENST00000306014 SPTA1P02549 2419 aa11.57□□□□□ -0.56
DDX54-201ENST00000306014 F6UZH7 168 aa11.57□□□□□ -0.56
DDX54-201ENST00000306014 TOX3O15405 576 aaPredicted RBP11.57□□□□□ -0.56
DDX54-201ENST00000306014 RAMP1O60894 148 aa11.57□□□□□ -0.56
DDX54-201ENST00000306014 CST2P09228 141 aa11.57□□□□□ -0.56
DDX54-201ENST00000306014 PRF1P14222 555 aa11.57□□□□□ -0.56
DDX54-201ENST00000306014 KLK2P20151 261 aa11.57□□□□□ -0.56
DDX54-201ENST00000306014 SRSF3P84103 164 aaKnown RBP11.57□□□□□ -0.56
DDX54-201ENST00000306014 FFAR4Q5NUL3 377 aa11.57□□□□□ -0.56
DDX54-201ENST00000306014 TMEM252Q8N6L7 170 aa11.57□□□□□ -0.56
DDX54-201ENST00000306014 OR52M1Q8NGK5 317 aa11.57□□□□□ -0.56
DDX54-201ENST00000306014 VOPP1Q96AW1 172 aa11.57□□□□□ -0.56
DDX54-201ENST00000306014 KLHDC3Q9BQ90 382 aa11.57□□□□□ -0.56
DDX54-201ENST00000306014 PLXND1Q9Y4D7 1925 aa11.57□□□□□ -0.56
DDX54-201ENST00000306014 ZNF735P0CB33 412 aa11.57□□□□□ -0.56
DDX54-201ENST00000306014 SNAI3Q3KNW1 292 aa11.57□□□□□ -0.56
DDX54-201ENST00000306014 SPINK9Q5DT21 86 aa11.57□□□□□ -0.56
DDX54-201ENST00000306014 FAM27BQ5VT28 67 aa11.57□□□□□ -0.56
DDX54-201ENST00000306014 OR10AD1Q8NGE0 317 aa11.57□□□□□ -0.56
DDX54-201ENST00000306014 IP6K3Q96PC2 410 aa11.57□□□□□ -0.56
DDX54-201ENST00000306014 NGFP01138 241 aa11.57□□□□□ -0.56
DDX54-201ENST00000306014 IGHMP01871 453 aa11.57□□□□□ -0.56
DDX54-201ENST00000306014 LIFP15018 202 aa11.57□□□□□ -0.56
DDX54-201ENST00000306014 CHRNA7P36544 502 aa11.57□□□□□ -0.56
DDX54-201ENST00000306014 GALR1P47211 349 aa11.57□□□□□ -0.56
DDX54-201ENST00000306014 ERVS71-1P61550 626 aa11.57□□□□□ -0.56
DDX54-201ENST00000306014 NSUN5P2Q63ZY6 315 aa11.57□□□□□ -0.56
DDX54-201ENST00000306014 SF3B5Q9BWJ5 86 aaKnown RBP11.57□□□□□ -0.56
DDX54-201ENST00000306014 TWSG1Q9GZX9 223 aa11.57□□□□□ -0.56
DDX54-201ENST00000306014 CACFD1Q9UGQ2 172 aa11.57□□□□□ -0.56
DDX54-201ENST00000306014 XKRY2A2RUG3 117 aa11.56□□□□□ -0.56
DDX54-201ENST00000306014 G3V3Q6 166 aa11.56□□□□□ -0.56
DDX54-201ENST00000306014 CXorf66Q5JRM2 361 aaPredicted RBP11.56□□□□□ -0.56
DDX54-201ENST00000306014 ETV3LQ6ZN32 361 aa11.56□□□□□ -0.56
DDX54-201ENST00000306014 HIST1H2BAQ96A08 127 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms