RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 OR6X1Q8NH79 312 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 ANGPTL6Q8NI99 470 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 STARD4Q96DR4 205 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 THYN1Q9P016 225 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 PAFAH1B2P68402 229 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 PRSS42Q7Z5A4 293 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 SIGLECL1Q8N7X8 197 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 NTNG2Q96CW9 530 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 UQCC1Q9NVA1 299 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 FRRS1LQ9P0K9 344 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 STARD6P59095 220 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 PSG4Q00888 419 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 RBPMSQ93062 196 aaKnown RBP6.81□□□□□ -1.32
SCN9A-201ENST00000303354 SRD5A3Q9H8P0 318 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 WIPI2Q9Y4P8 454 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 TRAV34A0A0B4J273 112 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 KIAA1324LA8MWY0 1029 aaPredicted RBP6.81□□□□□ -1.32
SCN9A-201ENST00000303354 KIAA0040Q15053 153 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 GGNBP1Q5YKI7 109 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 SLC51BQ86UW2 128 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 Q8WTZ3 238 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 C16orf92Q96LL3 132 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 GABARAPL3Q9BY60 117 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 SRXN1Q9BYN0 137 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 ZNF275Q9NSD4 429 aaPredicted RBP6.81□□□□□ -1.32
SCN9A-201ENST00000303354 PROB1E7EW31 1015 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 CD24P25063 80 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 MMP15P51511 669 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 ADAD2Q8NCV1 583 aaKnown RBP6.81□□□□□ -1.32
SCN9A-201ENST00000303354 MRGPRFQ96AM1 343 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 UBE2L6O14933 153 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 FUCA1P04066 466 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 RAB7AP51149 207 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 ZBTB44Q8NCP5 570 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 SPSB1Q96BD6 273 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 LTBRP36941 435 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 RPL30P62888 115 aaKnown RBP6.81□□□□□ -1.32
SCN9A-201ENST00000303354 DCAF12L2Q5VW00 463 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 VKORC1L1Q8N0U8 176 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 PRSS3P2Q8NHM4 247 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 TMEM174Q8WUU8 243 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 PP6455Q8WZ26 134 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 CIB3Q96Q77 187 aaPredicted RBP6.81□□□□□ -1.32
SCN9A-201ENST00000303354 UCK1Q9HA47 277 aa6.81□□□□□ -1.32
SCN9A-201ENST00000303354 TGFAP01135 160 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 THY1P04216 161 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 SRSF6Q13247 344 aaKnown RBP6.8□□□□□ -1.32
SCN9A-201ENST00000303354 GBGT1Q8N5D6 347 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 MYH14Q7Z406 1995 aaKnown RBP6.8□□□□□ -1.32
SCN9A-201ENST00000303354 TRPM3Q9HCF6 1732 aaPredicted RBP6.8□□□□□ -1.32
SCN9A-201ENST00000303354 PDZK1IP1Q13113 114 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 TMEM37Q8WXS4 190 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 HGDQ93099 445 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 ZNF552Q9H707 407 aaPredicted RBP6.8□□□□□ -1.32
SCN9A-201ENST00000303354 GAR1Q9NY12 217 aaKnown RBP6.8□□□□□ -1.32
SCN9A-201ENST00000303354 MRM2Q9UI43 246 aaKnown RBP6.8□□□□□ -1.32
SCN9A-201ENST00000303354 CTSSP25774 331 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 MVDP53602 400 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 CDK5Q00535 292 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 PPP1R1AQ13522 171 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 FAM78BQ5VT40 261 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 FAM216AQ8WUB2 273 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.8□□□□□ -1.32
SCN9A-201ENST00000303354 SCN9AQ15858 1988 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 NHLH1Q02575 133 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 NHLH2Q02577 135 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 SNAI3Q3KNW1 292 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 TMEM229BQ8NBD8 167 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 OR10G4Q8NGN3 311 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 OR10G9Q8NGN4 311 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 OR10G7Q8NGN6 311 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 ZNF714Q96N38 554 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 ZDHHC11Q9H8X9 412 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 SCPEP1Q9HB40 452 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 KLK13Q9UKR3 277 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 TJP1Q07157 1748 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 TMEM229AB2RXF0 380 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 TRAPPC2P0DI81 140 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 TRAPPC2BP0DI82 140 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 RANP62826 216 aaKnown RBP6.8□□□□□ -1.32
SCN9A-201ENST00000303354 KRTCAP3Q53RY4 240 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 Q8IYB0 196 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 RAB18Q9NP72 206 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 HTR1DP28221 377 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 MIDNQ504T8 468 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 FAHD1Q6P587 224 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 SLC17A2O00624 439 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 GSTZ1O43708 216 aaPredicted RBP6.8□□□□□ -1.32
SCN9A-201ENST00000303354 ZNF738Q8NE65 137 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 TRAPPC1Q9Y5R8 145 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 PPIAL4CA0A0B4J2A2 164 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 LANCL1O43813 399 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 PPIAL4GP0DN37 164 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 RAB5AP20339 215 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 PJVKQ0ZLH3 352 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 LGALSLQ3ZCW2 172 aaPredicted RBP6.8□□□□□ -1.32
SCN9A-201ENST00000303354 TCTE3Q8IZS6 198 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 ZFAND2BQ8WV99 257 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 BTF3L4Q96K17 158 aa6.8□□□□□ -1.32
SCN9A-201ENST00000303354 TMEM38BQ9NVV0 291 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms