RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 ST6GALNAC3Q8NDV1 305 aa18.82■□□□□ 0.6
SMAD1-201ENST00000302085 PLPPR1Q8TBJ4 325 aa18.82■□□□□ 0.6
SMAD1-201ENST00000302085 GON7Q9BXV9 100 aa18.82■□□□□ 0.6
SMAD1-201ENST00000302085 MRPL37Q9BZE1 423 aaKnown RBP18.82■□□□□ 0.6
SMAD1-201ENST00000302085 CLEC4MQ9H2X3 399 aaPredicted RBP18.82■□□□□ 0.6
SMAD1-201ENST00000302085 TMEM165Q9HC07 324 aa18.82■□□□□ 0.6
SMAD1-201ENST00000302085 C1orf123Q9NWV4 160 aa18.82■□□□□ 0.6
SMAD1-201ENST00000302085 ATP23Q9Y6H3 246 aa18.82■□□□□ 0.6
SMAD1-201ENST00000302085 SHANK1Q9Y566 2161 aa18.81■□□□□ 0.6
SMAD1-201ENST00000302085 RGS11O94810 467 aa18.81■□□□□ 0.6
SMAD1-201ENST00000302085 HAND1O96004 215 aa18.81■□□□□ 0.6
SMAD1-201ENST00000302085 AADACP22760 399 aa18.81■□□□□ 0.6
SMAD1-201ENST00000302085 CA7P43166 264 aa18.81■□□□□ 0.6
SMAD1-201ENST00000302085 GLP1RP43220 463 aa18.81■□□□□ 0.6
SMAD1-201ENST00000302085 CEBPDP49716 269 aaPredicted RBP18.81■□□□□ 0.6
SMAD1-201ENST00000302085 FXYD4P59646 89 aa18.81■□□□□ 0.6
SMAD1-201ENST00000302085 RPS23P62266 143 aaKnown RBP18.81■□□□□ 0.6
SMAD1-201ENST00000302085 HERPUD1Q15011 391 aa18.81■□□□□ 0.6
SMAD1-201ENST00000302085 ANKRD55Q3KP44 614 aa18.81■□□□□ 0.6
SMAD1-201ENST00000302085 SPRNQ5BIV9 151 aa18.81■□□□□ 0.6
SMAD1-201ENST00000302085 LPCAT3Q6P1A2 487 aa18.81■□□□□ 0.6
SMAD1-201ENST00000302085 TMEM108Q6UXF1 575 aa18.81■□□□□ 0.6
SMAD1-201ENST00000302085 ACP7Q6ZNF0 438 aa18.81■□□□□ 0.6
SMAD1-201ENST00000302085 TOMM40LQ969M1 308 aa18.81■□□□□ 0.6
SMAD1-201ENST00000302085 MOB3AQ96BX8 217 aa18.81■□□□□ 0.6
SMAD1-201ENST00000302085 A0A0B4J2A0 478 aa18.81■□□□□ 0.6
SMAD1-201ENST00000302085 PTBP3O95758 552 aaKnown RBP18.81■□□□□ 0.6
SMAD1-201ENST00000302085 PTAFRP25105 342 aa18.81■□□□□ 0.6
SMAD1-201ENST00000302085 CASP6P55212 293 aa18.81■□□□□ 0.6
SMAD1-201ENST00000302085 OR14J1Q9UGF5 321 aa18.81■□□□□ 0.6
SMAD1-201ENST00000302085 SHPKQ9UHJ6 478 aa18.81■□□□□ 0.6
SMAD1-201ENST00000302085 IGKV1-6A0A0C4DH72 117 aa18.8■□□□□ 0.6
SMAD1-201ENST00000302085 KIR2DS1A0A191URI9 304 aa18.8■□□□□ 0.6
SMAD1-201ENST00000302085 RCC1P18754 421 aaPredicted RBP18.8■□□□□ 0.6
SMAD1-201ENST00000302085 KIR2DS4P43632 304 aa18.8■□□□□ 0.6
SMAD1-201ENST00000302085 KIR2DS1Q14954 304 aa18.8■□□□□ 0.6
SMAD1-201ENST00000302085 SHEQ5VZ18 495 aa18.8■□□□□ 0.6
SMAD1-201ENST00000302085 FIP1L1Q6UN15 594 aaKnown RBP18.8■□□□□ 0.6
SMAD1-201ENST00000302085 NUP37Q8NFH4 326 aa18.8■□□□□ 0.6
SMAD1-201ENST00000302085 ELMOD3Q96FG2 381 aa18.8■□□□□ 0.6
SMAD1-201ENST00000302085 SEC22AQ96IW7 307 aa18.8■□□□□ 0.6
SMAD1-201ENST00000302085 TREM2Q9NZC2 230 aa18.8■□□□□ 0.6
SMAD1-201ENST00000302085 TAAR3PQ9P1P4 343 aa18.8■□□□□ 0.6
SMAD1-201ENST00000302085 MDH2P40926 338 aaKnown RBP18.79■□□□□ 0.6
SMAD1-201ENST00000302085 UCP3P55916 312 aa18.79■□□□□ 0.6
SMAD1-201ENST00000302085 SEC61A1P61619 476 aaKnown RBP18.79■□□□□ 0.6
SMAD1-201ENST00000302085 ZNF497Q6ZNH5 498 aa18.79■□□□□ 0.6
SMAD1-201ENST00000302085 WFIKKN1Q96NZ8 548 aa18.79■□□□□ 0.6
SMAD1-201ENST00000302085 hCG_1807616A0A1W2PRN6 198 aa18.79■□□□□ 0.6
SMAD1-201ENST00000302085 BET1O15155 118 aa18.79■□□□□ 0.6
SMAD1-201ENST00000302085 ATXN7O15265 892 aaPredicted RBP18.79■□□□□ 0.6
SMAD1-201ENST00000302085 CD8AP01732 235 aa18.79■□□□□ 0.6
SMAD1-201ENST00000302085 LMO1P25800 156 aa18.79■□□□□ 0.6
SMAD1-201ENST00000302085 GAPTQ8N292 157 aa18.79■□□□□ 0.6
SMAD1-201ENST00000302085 LRRC29Q8WV35 223 aa18.79■□□□□ 0.6
SMAD1-201ENST00000302085 CRYM-AS1A6NIL9 109 aa18.78■□□□□ 0.6
SMAD1-201ENST00000302085 SPRY3O43610 288 aa18.78■□□□□ 0.6
SMAD1-201ENST00000302085 PPYP01298 95 aa18.78■□□□□ 0.6
SMAD1-201ENST00000302085 SSTR2P30874 369 aa18.78■□□□□ 0.6
SMAD1-201ENST00000302085 SORDQ00796 357 aa18.78■□□□□ 0.6
SMAD1-201ENST00000302085 MRPL24Q96A35 216 aaKnown RBP18.78■□□□□ 0.6
SMAD1-201ENST00000302085 POLEQ07864 2286 aa18.78■□□□□ 0.6
SMAD1-201ENST00000302085 TRAV14DV4A0A0A6YYC5 116 aa18.77■□□□□ 0.6
SMAD1-201ENST00000302085 TRAV39A0A0B4J263 110 aa18.77■□□□□ 0.6
SMAD1-201ENST00000302085 FAM25EA8MYX2 175 aa18.77■□□□□ 0.6
SMAD1-201ENST00000302085 ABCD4O14678 606 aa18.77■□□□□ 0.6
SMAD1-201ENST00000302085 PSPNO60542 156 aa18.77■□□□□ 0.6
SMAD1-201ENST00000302085 TFF1P04155 84 aa18.77■□□□□ 0.6
SMAD1-201ENST00000302085 TK1P04183 234 aa18.77■□□□□ 0.6
SMAD1-201ENST00000302085 CXCL2P19875 107 aa18.77■□□□□ 0.6
SMAD1-201ENST00000302085 SERPINF1P36955 418 aa18.77■□□□□ 0.6
SMAD1-201ENST00000302085 PIGPP57054 158 aa18.77■□□□□ 0.6
SMAD1-201ENST00000302085 BSPH1Q075Z2 132 aa18.77■□□□□ 0.6
SMAD1-201ENST00000302085 SSX8Q7RTT4 187 aa18.77■□□□□ 0.6
SMAD1-201ENST00000302085 KDF1Q8NAX2 398 aaPredicted RBP18.77■□□□□ 0.6
SMAD1-201ENST00000302085 OR5T2Q8NGG2 359 aa18.77■□□□□ 0.6
SMAD1-201ENST00000302085 COQ8AQ8NI60 647 aa18.77■□□□□ 0.6
SMAD1-201ENST00000302085 PIK3IP1Q96FE7 263 aa18.77■□□□□ 0.6
SMAD1-201ENST00000302085 MEGF10Q96KG7 1140 aa18.77■□□□□ 0.6
SMAD1-201ENST00000302085 GLS2Q9UI32 602 aa18.77■□□□□ 0.6
SMAD1-201ENST00000302085 IFNA2P01563 188 aa18.77■□□□□ 0.59
SMAD1-201ENST00000302085 CTXN2P0C2S0 81 aa18.77■□□□□ 0.59
SMAD1-201ENST00000302085 SELENOVP59797 346 aa18.77■□□□□ 0.59
SMAD1-201ENST00000302085 HERV-K104P61576 105 aa18.77■□□□□ 0.59
SMAD1-201ENST00000302085 CHD3Q12873 2000 aaKnown RBP18.77■□□□□ 0.59
SMAD1-201ENST00000302085 ATXN7L3Q14CW9 347 aaPredicted RBP18.77■□□□□ 0.59
SMAD1-201ENST00000302085 PCSK4Q6UW60 755 aa18.77■□□□□ 0.59
SMAD1-201ENST00000302085 SGPP2Q8IWX5 399 aa18.77■□□□□ 0.59
SMAD1-201ENST00000302085 PRR7Q8TB68 274 aa18.77■□□□□ 0.59
SMAD1-201ENST00000302085 OR2V2Q96R30 315 aa18.77■□□□□ 0.59
SMAD1-201ENST00000302085 PDCD10Q9BUL8 212 aa18.77■□□□□ 0.59
SMAD1-201ENST00000302085 RSRP1Q9BUV0 290 aa18.77■□□□□ 0.59
SMAD1-201ENST00000302085 CHD8Q9HCK8 2581 aa18.77■□□□□ 0.59
SMAD1-201ENST00000302085 TEX13DA0A0J9YY54 714 aaPredicted RBP18.76■□□□□ 0.59
SMAD1-201ENST00000302085 POM121CA8CG34 1229 aa18.76■□□□□ 0.59
SMAD1-201ENST00000302085 H7C1Q1 480 aa18.76■□□□□ 0.59
SMAD1-201ENST00000302085 CCL21O00585 134 aa18.76■□□□□ 0.59
SMAD1-201ENST00000302085 TSC22D2O75157 780 aa18.76■□□□□ 0.59
SMAD1-201ENST00000302085 EGR1P18146 543 aa18.76■□□□□ 0.59
SMAD1-201ENST00000302085 ZNF81P51508 661 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms