RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 RSPO1Q2MKA7 263 aaPredicted RBP13.51□□□□□ -0.25
UBAP1-201ENST00000297661 CHRFAM7AQ494W8 412 aa13.51□□□□□ -0.25
UBAP1-201ENST00000297661 SPSB3Q6PJ21 355 aa13.51□□□□□ -0.25
UBAP1-201ENST00000297661 BRICD5Q6PL45 260 aa13.51□□□□□ -0.25
UBAP1-201ENST00000297661 URM1Q9BTM9 101 aaKnown RBP13.51□□□□□ -0.25
UBAP1-201ENST00000297661 CCDC187A0A096LP49 1063 aa13.5□□□□□ -0.25
UBAP1-201ENST00000297661 DVL1O14640 695 aa13.5□□□□□ -0.25
UBAP1-201ENST00000297661 PATE4P0C8F1 98 aa13.5□□□□□ -0.25
UBAP1-201ENST00000297661 EPHA8P29322 1005 aaPredicted RBP13.5□□□□□ -0.25
UBAP1-201ENST00000297661 GUCA1AP43080 201 aaPredicted RBP13.5□□□□□ -0.25
UBAP1-201ENST00000297661 ENDOGQ14249 297 aaKnown RBP13.5□□□□□ -0.25
UBAP1-201ENST00000297661 SNAI3Q3KNW1 292 aa13.5□□□□□ -0.25
UBAP1-201ENST00000297661 GPR157Q5UAW9 335 aa13.5□□□□□ -0.25
UBAP1-201ENST00000297661 SAP25Q8TEE9 199 aa13.5□□□□□ -0.25
UBAP1-201ENST00000297661 IGLV3-32A0A0A0MS00 114 aa13.5□□□□□ -0.25
UBAP1-201ENST00000297661 CDCP2Q5VXM1 449 aa13.5□□□□□ -0.25
UBAP1-201ENST00000297661 C20orf196Q8IYI0 205 aa13.5□□□□□ -0.25
UBAP1-201ENST00000297661 C1orf87Q8N0U7 546 aa13.5□□□□□ -0.25
UBAP1-201ENST00000297661 ZFP62Q8NB50 900 aaPredicted RBP13.5□□□□□ -0.25
UBAP1-201ENST00000297661 DYRK2Q92630 601 aa13.5□□□□□ -0.25
UBAP1-201ENST00000297661 PECRQ9BY49 303 aa13.5□□□□□ -0.25
UBAP1-201ENST00000297661 GPR173Q9NS66 373 aa13.5□□□□□ -0.25
UBAP1-201ENST00000297661 MCTS1Q9ULC4 181 aaKnown RBP13.5□□□□□ -0.25
UBAP1-201ENST00000297661 B3GALT1Q9Y5Z6 326 aa13.5□□□□□ -0.25
UBAP1-201ENST00000297661 GEMIN2O14893 280 aaKnown RBP13.49□□□□□ -0.25
UBAP1-201ENST00000297661 ZNHIT1O43257 154 aa13.49□□□□□ -0.25
UBAP1-201ENST00000297661 GLI4P10075 376 aa13.49□□□□□ -0.25
UBAP1-201ENST00000297661 MSR1P21757 451 aa13.49□□□□□ -0.25
UBAP1-201ENST00000297661 RRADP55042 308 aa13.49□□□□□ -0.25
UBAP1-201ENST00000297661 BATF2Q8N1L9 274 aa13.49□□□□□ -0.25
UBAP1-201ENST00000297661 ZNF700Q9H0M5 742 aa13.49□□□□□ -0.25
UBAP1-201ENST00000297661 PLEK2Q9NYT0 353 aa13.49□□□□□ -0.25
UBAP1-201ENST00000297661 PITPNC1Q9UKF7 332 aa13.49□□□□□ -0.25
UBAP1-201ENST00000297661 WSB1Q9Y6I7 421 aa13.49□□□□□ -0.25
UBAP1-201ENST00000297661 ZNF705GA8MUZ8 300 aaPredicted RBP13.49□□□□□ -0.25
UBAP1-201ENST00000297661 TNFSF11O14788 317 aa13.49□□□□□ -0.25
UBAP1-201ENST00000297661 SPRY1O43609 319 aaPredicted RBP13.49□□□□□ -0.25
UBAP1-201ENST00000297661 DKK1O94907 266 aa13.49□□□□□ -0.25
UBAP1-201ENST00000297661 CER1O95813 267 aa13.49□□□□□ -0.25
UBAP1-201ENST00000297661 IL18BPO95998 194 aa13.49□□□□□ -0.25
UBAP1-201ENST00000297661 GRB2P62993 217 aaKnown RBP13.49□□□□□ -0.25
UBAP1-201ENST00000297661 SLC10A1Q14973 349 aa13.49□□□□□ -0.25
UBAP1-201ENST00000297661 FADS6Q8N9I5 356 aa13.49□□□□□ -0.25
UBAP1-201ENST00000297661 KIAA1456Q9P272 454 aa13.49□□□□□ -0.25
UBAP1-201ENST00000297661 LAMA5O15230 3695 aa13.49□□□□□ -0.25
UBAP1-201ENST00000297661 NSG1A0A0A6YYJ2 146 aa13.48□□□□□ -0.25
UBAP1-201ENST00000297661 CRYM-AS1A6NIL9 109 aa13.48□□□□□ -0.25
UBAP1-201ENST00000297661 DHRS7CA6NNS2 312 aa13.48□□□□□ -0.25
UBAP1-201ENST00000297661 TLX3O43711 291 aaPredicted RBP13.48□□□□□ -0.25
UBAP1-201ENST00000297661 CCL1P22362 96 aa13.48□□□□□ -0.25
UBAP1-201ENST00000297661 ICAM4Q14773 271 aa13.48□□□□□ -0.25
UBAP1-201ENST00000297661 PCOLCEQ15113 449 aa13.48□□□□□ -0.25
UBAP1-201ENST00000297661 SP6Q3SY56 376 aa13.48□□□□□ -0.25
UBAP1-201ENST00000297661 OR2G3Q8NGZ4 309 aa13.48□□□□□ -0.25
UBAP1-201ENST00000297661 SSC4DQ8WTU2 575 aa13.48□□□□□ -0.25
UBAP1-201ENST00000297661 ZNF2Q9BSG1 426 aaPredicted RBP13.48□□□□□ -0.25
UBAP1-201ENST00000297661 GPR87Q9BY21 358 aa13.48□□□□□ -0.25
UBAP1-201ENST00000297661 TMEM9BQ9NQ34 198 aa13.48□□□□□ -0.25
UBAP1-201ENST00000297661 FAM221AA4D161 298 aa13.48□□□□□ -0.25
UBAP1-201ENST00000297661 NPIPA2E9PIF3 369 aa13.48□□□□□ -0.25
UBAP1-201ENST00000297661 NPIPA3F8WFD2 350 aa13.48□□□□□ -0.25
UBAP1-201ENST00000297661 SCAF4O95104 1147 aaKnown RBP13.48□□□□□ -0.25
UBAP1-201ENST00000297661 AMBPP02760 352 aa13.48□□□□□ -0.25
UBAP1-201ENST00000297661 PDCD1Q15116 288 aa13.48□□□□□ -0.25
UBAP1-201ENST00000297661 ADPRHL1Q8NDY3 354 aa13.48□□□□□ -0.25
UBAP1-201ENST00000297661 RCC1LQ96I51 464 aaKnown RBP13.48□□□□□ -0.25
UBAP1-201ENST00000297661 AK3Q9UIJ7 227 aa13.48□□□□□ -0.25
UBAP1-201ENST00000297661 TCFL5Q9UL49 500 aa13.48□□□□□ -0.25
UBAP1-201ENST00000297661 PTRH2Q9Y3E5 179 aaKnown RBP13.48□□□□□ -0.25
UBAP1-201ENST00000297661 FAM230AA0A1W2PPH8 454 aa13.48□□□□□ -0.25
UBAP1-201ENST00000297661 MBP02144 154 aa13.48□□□□□ -0.25
UBAP1-201ENST00000297661 TMEM225BP0DP42 221 aa13.48□□□□□ -0.25
UBAP1-201ENST00000297661 MDKP21741 143 aaPredicted RBP13.48□□□□□ -0.25
UBAP1-201ENST00000297661 OPRM1P35372 400 aa13.48□□□□□ -0.25
UBAP1-201ENST00000297661 CD200P41217 278 aa13.48□□□□□ -0.25
UBAP1-201ENST00000297661 ZNF468Q5VIY5 522 aaPredicted RBP13.48□□□□□ -0.25
UBAP1-201ENST00000297661 SLC35E3Q7Z769 313 aa13.48□□□□□ -0.25
UBAP1-201ENST00000297661 TMEM183AQ8IXX5 376 aa13.48□□□□□ -0.25
UBAP1-201ENST00000297661 RNASEH2CQ8TDP1 164 aaKnown RBP13.48□□□□□ -0.25
UBAP1-201ENST00000297661 REEP6Q96HR9 211 aa13.48□□□□□ -0.25
UBAP1-201ENST00000297661 ACTR3CQ9C0K3 210 aaPredicted RBP13.48□□□□□ -0.25
UBAP1-201ENST00000297661 C19orf25Q9UFG5 118 aaPredicted RBP13.48□□□□□ -0.25
UBAP1-201ENST00000297661 M0R135 149 aa13.47□□□□□ -0.25
UBAP1-201ENST00000297661 MSTNO14793 375 aa13.47□□□□□ -0.25
UBAP1-201ENST00000297661 TOX3O15405 576 aaPredicted RBP13.47□□□□□ -0.25
UBAP1-201ENST00000297661 CTSDP07339 412 aaPredicted RBP13.47□□□□□ -0.25
UBAP1-201ENST00000297661 CCL4P13236 92 aa13.47□□□□□ -0.25
UBAP1-201ENST00000297661 FUT3P21217 361 aa13.47□□□□□ -0.25
UBAP1-201ENST00000297661 GJC3Q8NFK1 279 aa13.47□□□□□ -0.25
UBAP1-201ENST00000297661 NABP1Q96AH0 204 aa13.47□□□□□ -0.25
UBAP1-201ENST00000297661 ZNF799Q96GE5 643 aa13.47□□□□□ -0.25
UBAP1-201ENST00000297661 FAAP24Q9BTP7 215 aa13.47□□□□□ -0.25
UBAP1-201ENST00000297661 SNHG12Q9BXW3 62 aa13.47□□□□□ -0.25
UBAP1-201ENST00000297661 TP53I11O14683 189 aa13.47□□□□□ -0.25
UBAP1-201ENST00000297661 SOX15O60248 233 aa13.47□□□□□ -0.25
UBAP1-201ENST00000297661 DHRS3O75911 302 aa13.47□□□□□ -0.25
UBAP1-201ENST00000297661 ATP6V0CP27449 155 aa13.47□□□□□ -0.25
UBAP1-201ENST00000297661 HLA-DRB3P79483 266 aa13.47□□□□□ -0.25
UBAP1-201ENST00000297661 KCNMB1Q16558 191 aa13.47□□□□□ -0.25
UBAP1-201ENST00000297661 TAF9Q16594 264 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms