RNA–Protein interactions for RNA: ENST00000295550.8

COL6A3-201, Transcript of collagen type VI alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A3, Length 10,749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-201ENST00000295550 LYZP61626 148 aa8.76□□□□□ -1.01
COL6A3-201ENST00000295550 DGAT2L7PQ6IED9 249 aa8.76□□□□□ -1.01
COL6A3-201ENST00000295550 PP6455Q8WZ26 134 aa8.76□□□□□ -1.01
COL6A3-201ENST00000295550 IGHV3-15A0A0B4J1V0 119 aa8.76□□□□□ -1.01
COL6A3-201ENST00000295550 MYOGP15173 224 aa8.76□□□□□ -1.01
COL6A3-201ENST00000295550 DUSP2Q05923 314 aa8.76□□□□□ -1.01
COL6A3-201ENST00000295550 FLYWCH2Q96CP2 140 aaKnown RBP8.76□□□□□ -1.01
COL6A3-201ENST00000295550 TMEM208Q9BTX3 173 aa8.76□□□□□ -1.01
COL6A3-201ENST00000295550 PARD6GQ9BYG4 376 aaPredicted RBP8.76□□□□□ -1.01
COL6A3-201ENST00000295550 INSL4Q14641 139 aa8.76□□□□□ -1.01
COL6A3-201ENST00000295550 FAM209AQ5JX71 171 aa8.76□□□□□ -1.01
COL6A3-201ENST00000295550 APOBEC3DQ96AK3 386 aaPredicted RBP8.76□□□□□ -1.01
COL6A3-201ENST00000295550 TAAR3PQ9P1P4 343 aa8.76□□□□□ -1.01
COL6A3-201ENST00000295550 HSF4Q9ULV5 492 aa8.76□□□□□ -1.01
COL6A3-201ENST00000295550 PDE6DO43924 150 aa8.76□□□□□ -1.01
COL6A3-201ENST00000295550 IGFBP7Q16270 282 aa8.76□□□□□ -1.01
COL6A3-201ENST00000295550 KHDC3LQ587J8 217 aa8.76□□□□□ -1.01
COL6A3-201ENST00000295550 DNLZQ5SXM8 178 aa8.76□□□□□ -1.01
COL6A3-201ENST00000295550 OR1F12Q8NHA8 337 aa8.76□□□□□ -1.01
COL6A3-201ENST00000295550 CCL4L1Q8NHW4 92 aa8.76□□□□□ -1.01
COL6A3-201ENST00000295550 FAM131CQ96AQ9 280 aa8.76□□□□□ -1.01
COL6A3-201ENST00000295550 SIGLEC11Q96RL6 698 aa8.76□□□□□ -1.01
COL6A3-201ENST00000295550 LILRA5A6NI73 299 aa8.76□□□□□ -1.01
COL6A3-201ENST00000295550 BRS3P32247 399 aa8.76□□□□□ -1.01
COL6A3-201ENST00000295550 MDH2P40926 338 aaKnown RBP8.76□□□□□ -1.01
COL6A3-201ENST00000295550 LBX1P52954 281 aa8.76□□□□□ -1.01
COL6A3-201ENST00000295550 TMEM240Q5SV17 173 aa8.76□□□□□ -1.01
COL6A3-201ENST00000295550 MRGPRX4Q96LA9 322 aa8.76□□□□□ -1.01
COL6A3-201ENST00000295550 OR6C3Q9NZP0 311 aa8.76□□□□□ -1.01
COL6A3-201ENST00000295550 PIPOXQ9P0Z9 390 aa8.76□□□□□ -1.01
COL6A3-201ENST00000295550 SIAH2O43255 324 aa8.76□□□□□ -1.01
COL6A3-201ENST00000295550 DLX1P56177 255 aa8.76□□□□□ -1.01
COL6A3-201ENST00000295550 IL13RA2Q14627 380 aa8.76□□□□□ -1.01
COL6A3-201ENST00000295550 FNDC7Q5VTL7 733 aa8.76□□□□□ -1.01
COL6A3-201ENST00000295550 RHOVQ96L33 236 aa8.76□□□□□ -1.01
COL6A3-201ENST00000295550 MS4A7Q9GZW8 240 aaPredicted RBP8.76□□□□□ -1.01
COL6A3-201ENST00000295550 MTFP1Q9UDX5 166 aa8.76□□□□□ -1.01
COL6A3-201ENST00000295550 A0A1W2PN81 502 aa8.76□□□□□ -1.01
COL6A3-201ENST00000295550 NMUP48645 174 aa8.76□□□□□ -1.01
COL6A3-201ENST00000295550 SPATA45Q537H7 98 aa8.76□□□□□ -1.01
COL6A3-201ENST00000295550 MRPL54Q6P161 138 aaKnown RBP8.76□□□□□ -1.01
COL6A3-201ENST00000295550 WFDC8Q8IUA0 241 aa8.76□□□□□ -1.01
COL6A3-201ENST00000295550 OR2C3Q8N628 320 aa8.76□□□□□ -1.01
COL6A3-201ENST00000295550 C17orf47Q8NEP4 570 aa8.76□□□□□ -1.01
COL6A3-201ENST00000295550 MRGPRX1Q96LB2 322 aa8.76□□□□□ -1.01
COL6A3-201ENST00000295550 MED29Q9NX70 200 aa8.76□□□□□ -1.01
COL6A3-201ENST00000295550 A0A1W2PNR3 127 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 NRG2O14511 850 aaPredicted RBP8.75□□□□□ -1.01
COL6A3-201ENST00000295550 CTAG2O75638 210 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 GP1BAP07359 652 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 COMPP49747 757 aaPredicted RBP8.75□□□□□ -1.01
COL6A3-201ENST00000295550 YBX1P67809 324 aaKnown RBP8.75□□□□□ -1.01
COL6A3-201ENST00000295550 BTG2P78543 158 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 NOXO1Q8NFA2 376 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 GAGE10A6NGK3 116 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 DEFB108AA8MXU0 73 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 HPXP02790 462 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 RPS4Y1P22090 263 aaKnown RBP8.75□□□□□ -1.01
COL6A3-201ENST00000295550 UBE2V2Q15819 145 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 OR2D2Q9H210 308 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 OR2T8A6NH00 312 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 FIGNL2A6NMB9 653 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 ZFPL1O95159 310 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 PTGFRP43088 359 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 TMEM33P57088 247 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 COX19Q49B96 90 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 OTPQ5XKR4 325 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 NPEPL1Q8NDH3 523 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 OR1L1Q8NH94 360 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 B9D1Q9UPM9 204 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 CDC42EP2O14613 210 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 RNF224P0DH78 156 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 UQCRFS1P47985 274 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 CXCL12P48061 93 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 TCTAP57738 103 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 CARFQ8N187 725 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 C5orf17Q8NAS9 161 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 ALKBH3Q96Q83 286 aaPredicted RBP8.75□□□□□ -1.01
COL6A3-201ENST00000295550 UBE2ZQ9H832 354 aaPredicted RBP8.75□□□□□ -1.01
COL6A3-201ENST00000295550 PROCRQ9UNN8 238 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 TSPAN13O95857 204 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 CCL11P51671 97 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 THBS4P35443 961 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 RPL30P62888 115 aaKnown RBP8.75□□□□□ -1.01
COL6A3-201ENST00000295550 ZNF79Q15937 498 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 AMMECR1LQ6DCA0 310 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 SSX8Q7RTT4 187 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 C9orf62Q8N4C0 152 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 LOC107984156A0A0G2JMH3 177 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 C3orf85A0A1B0GTC6 90 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 ARL17AQ8IVW1 177 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 CTDSPLO15194 276 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 RAB32Q13637 225 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 BSXQ3C1V8 233 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 LIAT1Q6ZQX7 453 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 ETFBKMTQ8IXQ9 262 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 SPACA9Q96E40 222 aaPredicted RBP8.75□□□□□ -1.01
COL6A3-201ENST00000295550 PECRQ9BY49 303 aa8.75□□□□□ -1.01
COL6A3-201ENST00000295550 HOXB3P14651 431 aaPredicted RBP8.74□□□□□ -1.01
COL6A3-201ENST00000295550 GABRA1P14867 456 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms