RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 RECKO95980 971 aa10.44□□□□□ -0.74
SYNGAP1-201ENST00000293748 CHRNA7P36544 502 aa10.44□□□□□ -0.74
SYNGAP1-201ENST00000293748 CDC34P49427 236 aaPredicted RBP10.44□□□□□ -0.74
SYNGAP1-201ENST00000293748 ASCL1P50553 236 aa10.44□□□□□ -0.74
SYNGAP1-201ENST00000293748 PKIAP61925 76 aa10.44□□□□□ -0.74
SYNGAP1-201ENST00000293748 TGIF1Q15583 401 aa10.44□□□□□ -0.74
SYNGAP1-201ENST00000293748 C19orf48Q6RUI8 117 aa10.44□□□□□ -0.74
SYNGAP1-201ENST00000293748 BTNL3Q6UXE8 466 aa10.44□□□□□ -0.74
SYNGAP1-201ENST00000293748 OVCH2Q7RTZ1 564 aa10.44□□□□□ -0.74
SYNGAP1-201ENST00000293748 NUFIP2Q7Z417 695 aaKnown RBP10.44□□□□□ -0.74
SYNGAP1-201ENST00000293748 PTP4A1Q93096 173 aa10.44□□□□□ -0.74
SYNGAP1-201ENST00000293748 IL22RA2Q969J5 263 aa10.44□□□□□ -0.74
SYNGAP1-201ENST00000293748 SARGQ9BW04 601 aa10.44□□□□□ -0.74
SYNGAP1-201ENST00000293748 WDR61Q9GZS3 305 aaKnown RBP10.44□□□□□ -0.74
SYNGAP1-201ENST00000293748 ALX4Q9H161 411 aaPredicted RBP10.44□□□□□ -0.74
SYNGAP1-201ENST00000293748 PPP1R3EQ9H7J1 279 aa10.44□□□□□ -0.74
SYNGAP1-201ENST00000293748 PARP11Q9NR21 331 aa10.44□□□□□ -0.74
SYNGAP1-201ENST00000293748 OR5AC1P0C628 307 aa10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 F2RP25116 425 aa10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 CEACAM16Q2WEN9 425 aa10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 RNASEKQ6P5S7 137 aaKnown RBP10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 LIAT1Q6ZQX7 453 aa10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 MYPOPQ86VE0 399 aaPredicted RBP10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 NUBPLQ8TB37 319 aa10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 RPS4Y2Q8TD47 263 aa10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 ANAPC16Q96DE5 110 aa10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 FOXB1Q99853 325 aa10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 CNTD2Q9H8S5 307 aa10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 A0A096LPE4 126 aa10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 A0A1W2PPZ6 126 aa10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 CRYAAP02489 173 aa10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 CRISP2P16562 243 aa10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 CCL11P51671 97 aa10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 AGFG1P52594 562 aaKnown RBP10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 RPS16P62249 146 aaKnown RBP10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 TMEM267Q0VDI3 215 aaPredicted RBP10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 CLEC18BQ6UXF7 455 aa10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 MRGPREQ86SM8 312 aa10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 OR1N1Q8NGS0 311 aa10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 MENTQ9BUN1 341 aa10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 MRM2Q9UI43 246 aaKnown RBP10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 PITPNC1Q9UKF7 332 aa10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 RP1P56715 2156 aa10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 PIKFYVEQ9Y2I7 2098 aa10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 TTRP02766 147 aa10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 HLA-GP17693 338 aa10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 CDAP32320 146 aa10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 GNG4P50150 75 aa10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 RHOBP62745 196 aa10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 OR5I1Q13606 314 aa10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 CEBPEQ15744 281 aa10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 IGFBP7Q16270 282 aa10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 SPACA9Q96E40 222 aaPredicted RBP10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 THOC3Q96J01 351 aaKnown RBP10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 TSPAN32Q96QS1 320 aa10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 SMDT1Q9H4I9 107 aa10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 MANBALQ9NQG1 85 aa10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 MRPS18AQ9NVS2 196 aaKnown RBP10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 ASXL3Q9C0F0 2248 aa10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 TRAV34A0A0B4J273 112 aa10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 SOX15O60248 233 aa10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 ZNF141Q15928 474 aa10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 FAM78BQ5VT40 261 aa10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 NRTNQ99748 197 aa10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 TMEM147Q9BVK8 224 aa10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 MS4A7Q9GZW8 240 aaPredicted RBP10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 HES4Q9HCC6 221 aa10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 SH3BGRL2Q9UJC5 107 aa10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 ERRFI1Q9UJM3 462 aaPredicted RBP10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 LIPGQ9Y5X9 500 aa10.43□□□□□ -0.74
SYNGAP1-201ENST00000293748 A0A1B0GTH9 108 aa10.42□□□□□ -0.74
SYNGAP1-201ENST00000293748 IGF2P01344 180 aa10.42□□□□□ -0.74
SYNGAP1-201ENST00000293748 NAAAQ02083 359 aa10.42□□□□□ -0.74
SYNGAP1-201ENST00000293748 ZNF273Q14593 569 aa10.42□□□□□ -0.74
SYNGAP1-201ENST00000293748 ETFRF1Q6IPR1 90 aa10.42□□□□□ -0.74
SYNGAP1-201ENST00000293748 VN1R4Q7Z5H5 301 aa10.42□□□□□ -0.74
SYNGAP1-201ENST00000293748 ZADH2Q8N4Q0 377 aa10.42□□□□□ -0.74
SYNGAP1-201ENST00000293748 C11orf42Q8N5U0 333 aa10.42□□□□□ -0.74
SYNGAP1-201ENST00000293748 OR10G4Q8NGN3 311 aa10.42□□□□□ -0.74
SYNGAP1-201ENST00000293748 OR10G9Q8NGN4 311 aa10.42□□□□□ -0.74
SYNGAP1-201ENST00000293748 OR10G7Q8NGN6 311 aa10.42□□□□□ -0.74
SYNGAP1-201ENST00000293748 OR2V1Q8NHB1 315 aa10.42□□□□□ -0.74
SYNGAP1-201ENST00000293748 FAAP24Q9BTP7 215 aa10.42□□□□□ -0.74
SYNGAP1-201ENST00000293748 KIAA1456Q9P272 454 aa10.42□□□□□ -0.74
SYNGAP1-201ENST00000293748 CACNG5Q9UF02 275 aa10.42□□□□□ -0.74
SYNGAP1-201ENST00000293748 LOC101059948A0A1B0GTJ6 334 aa10.42□□□□□ -0.74
SYNGAP1-201ENST00000293748 HRASP01112 189 aa10.42□□□□□ -0.74
SYNGAP1-201ENST00000293748 SEC11BP0C7V7 166 aa10.42□□□□□ -0.74
SYNGAP1-201ENST00000293748 ZNF117Q03924 483 aa10.42□□□□□ -0.74
SYNGAP1-201ENST00000293748 PRDX4Q13162 271 aa10.42□□□□□ -0.74
SYNGAP1-201ENST00000293748 MYBPHQ13203 477 aa10.42□□□□□ -0.74
SYNGAP1-201ENST00000293748 C6orf201Q7Z4U5 140 aa10.42□□□□□ -0.74
SYNGAP1-201ENST00000293748 VN1R1Q9GZP7 353 aa10.42□□□□□ -0.74
SYNGAP1-201ENST00000293748 GSX1Q9H4S2 264 aaPredicted RBP10.42□□□□□ -0.74
SYNGAP1-201ENST00000293748 PRSS50Q9UI38 385 aa10.42□□□□□ -0.74
SYNGAP1-201ENST00000293748 TIMM9Q9Y5J7 89 aa10.42□□□□□ -0.74
SYNGAP1-201ENST00000293748 LAMA2P24043 3122 aaKnown RBP10.42□□□□□ -0.74
SYNGAP1-201ENST00000293748 FAM74A7A6NL05 159 aa10.42□□□□□ -0.74
SYNGAP1-201ENST00000293748 FFAR1O14842 300 aa10.42□□□□□ -0.74
SYNGAP1-201ENST00000293748 FMODQ06828 376 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms