RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 OPN1MW2P0DN77 364 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 OPN1MW3P0DN78 364 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 DNASE1P24855 282 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 C22orf34Q6ZV56 151 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 BPIFB2Q8N4F0 458 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 OR4M1Q8NGD0 313 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 OR10V1Q8NGI7 309 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 KLF14Q8TD94 323 aaPredicted RBP7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 MOB3AQ96BX8 217 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 DAZAP1Q96EP5 407 aaKnown RBP7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 PERPQ96FX8 193 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 RNF115Q9Y4L5 304 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 C5orf63A6NC05 138 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 TMEM210A6NLX4 147 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 J3QKU1 62 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 FBXO24O75426 580 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 ADH4P08319 380 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 S100A1P23297 94 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 GPR6P46095 362 aaPredicted RBP7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 GPR176Q14439 515 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 HACD4Q5VWC8 232 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 ASPHD2Q6ICH7 369 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 SLC35G3Q8N808 338 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 FRZBQ92765 325 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 ARL11Q969Q4 196 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 MRPL24Q96A35 216 aaKnown RBP7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 BORCS7Q96B45 105 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 ADAT3Q96EY9 351 aaPredicted RBP7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 TAS2R4Q9NYW5 299 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 SH2D1BO14796 132 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 SOX15O60248 233 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 NCR1O76036 304 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 NGFP01138 241 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 GPR12P47775 334 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 CAMLGP49069 296 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 LUMP51884 338 aaPredicted RBP7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 LYPD6Q86Y78 171 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 CELF2-AS1Q8N7Q2 184 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 OR8G5Q8NG78 346 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 C17orf50Q8WW18 174 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 CMBLQ96DG6 245 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 BSCL2Q96G97 398 aaPredicted RBP7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 NMES1Q9C002 83 aa7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 PURGQ9UJV8 347 aaKnown RBP7.2□□□□□ -1.26
PTPDC1-201ENST00000288976 NOTOA8MTQ0 251 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 APELAP0DMC3 54 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 GPM6AP51674 278 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 FUT6P51993 359 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 ZNF672Q499Z4 452 aaPredicted RBP7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 C1orf100Q5SVJ3 147 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 KCNG3Q8TAE7 436 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 LINC01560Q8TB33 94 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 SEC22AQ96IW7 307 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 KIRREL1Q96J84 757 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 IGSF10Q6WRI0 2623 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 A0A0G2JK05 382 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 OR5B21A6NL26 309 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 AIPO00170 330 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 SDCBPO00560 298 aaPredicted RBP7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 H2AFB2P0C5Z0 115 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 ACKR3P25106 362 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 HTR2CP28335 458 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 GRNP28799 593 aaKnown RBP7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 S100A2P29034 98 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 ALDH3B1P43353 468 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 RAP2BP61225 183 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 LSAMPQ13449 338 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 EXOSC2Q13868 293 aaKnown RBP7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 CEACAM21Q3KPI0 293 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 AVPI1Q5T686 147 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 ZDHHC23Q8IYP9 409 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 SAXO1Q8IYX7 474 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 SORCS2Q96PQ0 1159 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 TMUB1Q9BVT8 246 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 OR2J1Q9GZK6 312 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 PPIL3Q9H2H8 161 aaKnown RBP7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 FBXO7Q9Y3I1 522 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 PCP4L1A6NKN8 68 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 ATP6V1G2-DDX39BF2Z307 99 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 PHF1O43189 567 aaPredicted RBP7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 CT45A6P0DMU7 189 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 CT45A5P0DMU8 189 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 CT45A7P0DMV0 189 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 INSL4Q14641 139 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 CT45A1Q5HYN5 189 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 LYG1Q8N1E2 194 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 OR56B1Q8NGI3 324 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 OR13G1Q8NGZ3 307 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 CT45A3Q8NHU0 189 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 CMTM2Q8TAZ6 248 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 ZNF431Q8TF32 576 aaPredicted RBP7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 OR5P3Q8WZ94 311 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 ORAI1Q96D31 301 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 POM121Q96HA1 1249 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 HYLS1Q96M11 299 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 TLNRD1Q9H1K6 362 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 CRIM1Q9NZV1 1036 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 RABL2AQ9UBK7 228 aaPredicted RBP7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 RABL2BQ9UNT1 228 aa7.19□□□□□ -1.26
PTPDC1-201ENST00000288976 ETV7Q9Y603 341 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms