RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 SEC22AQ96IW7 307 aa8.62□□□□□ -1.03
C9orf43-201ENST00000288462 RSRP1Q9BUV0 290 aa8.62□□□□□ -1.03
C9orf43-201ENST00000288462 ASF1BQ9NVP2 202 aa8.62□□□□□ -1.03
C9orf43-201ENST00000288462 PRR13Q9NZ81 148 aa8.62□□□□□ -1.03
C9orf43-201ENST00000288462 COMMD9Q9P000 198 aa8.62□□□□□ -1.03
C9orf43-201ENST00000288462 JKAMPQ9P055 326 aa8.62□□□□□ -1.03
C9orf43-201ENST00000288462 FAM25EA8MYX2 175 aa8.61□□□□□ -1.03
C9orf43-201ENST00000288462 HS3ST1O14792 307 aa8.61□□□□□ -1.03
C9orf43-201ENST00000288462 TUSC2O75896 110 aa8.61□□□□□ -1.03
C9orf43-201ENST00000288462 PTBP3O95758 552 aaKnown RBP8.61□□□□□ -1.03
C9orf43-201ENST00000288462 IGHV3-13P01766 116 aa8.61□□□□□ -1.03
C9orf43-201ENST00000288462 CRYAAP02489 173 aa8.61□□□□□ -1.03
C9orf43-201ENST00000288462 CTXN2P0C2S0 81 aa8.61□□□□□ -1.03
C9orf43-201ENST00000288462 S100A11P31949 105 aa8.61□□□□□ -1.03
C9orf43-201ENST00000288462 GLRXP35754 106 aa8.61□□□□□ -1.03
C9orf43-201ENST00000288462 PIGPP57054 158 aa8.61□□□□□ -1.03
C9orf43-201ENST00000288462 FXYD4P59646 89 aa8.61□□□□□ -1.03
C9orf43-201ENST00000288462 HLA-DRB3P79483 266 aa8.61□□□□□ -1.03
C9orf43-201ENST00000288462 C11orf87Q6NUJ2 197 aa8.61□□□□□ -1.03
C9orf43-201ENST00000288462 WDR82Q6UXN9 313 aa8.61□□□□□ -1.03
C9orf43-201ENST00000288462 C20orf204Q6ZNR8 217 aa8.61□□□□□ -1.03
C9orf43-201ENST00000288462 MOB1BQ7L9L4 216 aa8.61□□□□□ -1.03
C9orf43-201ENST00000288462 SGPP2Q8IWX5 399 aa8.61□□□□□ -1.03
C9orf43-201ENST00000288462 GALNT14Q96FL9 552 aa8.61□□□□□ -1.03
C9orf43-201ENST00000288462 USB1Q9BQ65 265 aaKnown RBP8.61□□□□□ -1.03
C9orf43-201ENST00000288462 CABLES2Q9BTV7 478 aa8.61□□□□□ -1.03
C9orf43-201ENST00000288462 NAA60Q9H7X0 242 aa8.61□□□□□ -1.03
C9orf43-201ENST00000288462 MSL2Q9HCI7 577 aa8.61□□□□□ -1.03
C9orf43-201ENST00000288462 SLC2A9Q9NRM0 540 aa8.61□□□□□ -1.03
C9orf43-201ENST00000288462 ELOVL5Q9NYP7 299 aa8.61□□□□□ -1.03
C9orf43-201ENST00000288462 SPEF1Q9Y4P9 236 aa8.61□□□□□ -1.03
C9orf43-201ENST00000288462 HEATR1Q9H583 2144 aaKnown RBP8.61□□□□□ -1.03
C9orf43-201ENST00000288462 IGKV1-6A0A0C4DH72 117 aa8.6□□□□□ -1.03
C9orf43-201ENST00000288462 SIRPB1O00241 398 aa8.6□□□□□ -1.03
C9orf43-201ENST00000288462 ADAP1O75689 374 aa8.6□□□□□ -1.03
C9orf43-201ENST00000288462 SCTP09683 121 aa8.6□□□□□ -1.03
C9orf43-201ENST00000288462 RBMXP38159 391 aaKnown RBP8.6□□□□□ -1.03
C9orf43-201ENST00000288462 CD200P41217 278 aa8.6□□□□□ -1.03
C9orf43-201ENST00000288462 HTR2BP41595 481 aa8.6□□□□□ -1.03
C9orf43-201ENST00000288462 MZT1Q08AG7 82 aa8.6□□□□□ -1.03
C9orf43-201ENST00000288462 PAN3Q58A45 887 aaKnown RBP8.6□□□□□ -1.03
C9orf43-201ENST00000288462 PRAMEF6Q5VXH4 476 aa8.6□□□□□ -1.03
C9orf43-201ENST00000288462 FIP1L1Q6UN15 594 aaKnown RBP8.6□□□□□ -1.03
C9orf43-201ENST00000288462 ZNF497Q6ZNH5 498 aa8.6□□□□□ -1.03
C9orf43-201ENST00000288462 TMUB2Q71RG4 321 aa8.6□□□□□ -1.03
C9orf43-201ENST00000288462 ZGRF1Q86YA3 2104 aa8.6□□□□□ -1.03
C9orf43-201ENST00000288462 PLPPR1Q8TBJ4 325 aa8.6□□□□□ -1.03
C9orf43-201ENST00000288462 FAM210AQ96ND0 272 aa8.6□□□□□ -1.03
C9orf43-201ENST00000288462 TMEM165Q9HC07 324 aa8.6□□□□□ -1.03
C9orf43-201ENST00000288462 RASL12Q9NYN1 266 aa8.6□□□□□ -1.03
C9orf43-201ENST00000288462 TNFSF18Q9UNG2 199 aa8.6□□□□□ -1.03
C9orf43-201ENST00000288462 SHANK1Q9Y566 2161 aa8.6□□□□□ -1.03
C9orf43-201ENST00000288462 IGLV3-9A0A075B6K5 115 aa8.6□□□□□ -1.03
C9orf43-201ENST00000288462 IGHV3-64DA0A0J9YX35 117 aa8.6□□□□□ -1.03
C9orf43-201ENST00000288462 TEX13DA0A0J9YY54 714 aaPredicted RBP8.6□□□□□ -1.03
C9orf43-201ENST00000288462 C5orf51A6NDU8 294 aa8.6□□□□□ -1.03
C9orf43-201ENST00000288462 NPIPB11E5RHQ5 1161 aa8.6□□□□□ -1.03
C9orf43-201ENST00000288462 H7C1Q1 480 aa8.6□□□□□ -1.03
C9orf43-201ENST00000288462 SH2D1BO14796 132 aa8.6□□□□□ -1.03
C9orf43-201ENST00000288462 HAND1O96004 215 aa8.6□□□□□ -1.03
C9orf43-201ENST00000288462 TK1P04183 234 aa8.6□□□□□ -1.03
C9orf43-201ENST00000288462 KCNJ3P48549 501 aa8.6□□□□□ -1.03
C9orf43-201ENST00000288462 CYCSP99999 105 aaKnown RBP8.6□□□□□ -1.03
C9orf43-201ENST00000288462 RBPJQ06330 500 aa8.6□□□□□ -1.03
C9orf43-201ENST00000288462 ZNF345Q14585 488 aa8.6□□□□□ -1.03
C9orf43-201ENST00000288462 ABCA11PQ4W5N1 156 aa8.6□□□□□ -1.03
C9orf43-201ENST00000288462 ZNF826PQ6ZT77 177 aa8.6□□□□□ -1.03
C9orf43-201ENST00000288462 C22orf34Q6ZV56 151 aa8.6□□□□□ -1.03
C9orf43-201ENST00000288462 C5orf24Q7Z6I8 188 aa8.6□□□□□ -1.03
C9orf43-201ENST00000288462 LRP11Q86VZ4 500 aa8.6□□□□□ -1.03
C9orf43-201ENST00000288462 OR4A4PQ8NGN8 299 aa8.6□□□□□ -1.03
C9orf43-201ENST00000288462 TMEM171Q8WVE6 324 aa8.6□□□□□ -1.03
C9orf43-201ENST00000288462 C1orf123Q9NWV4 160 aa8.6□□□□□ -1.03
C9orf43-201ENST00000288462 RDH8Q9NYR8 311 aa8.6□□□□□ -1.03
C9orf43-201ENST00000288462 TRBV6-7A0A0A0MS04 114 aa8.59□□□□□ -1.03
C9orf43-201ENST00000288462 RNF222A6NCQ9 220 aa8.59□□□□□ -1.03
C9orf43-201ENST00000288462 ZSCAN5BA6NJL1 495 aa8.59□□□□□ -1.03
C9orf43-201ENST00000288462 A6NLC8 198 aa8.59□□□□□ -1.03
C9orf43-201ENST00000288462 ATP6V1G2-DDX39BF2Z307 99 aa8.59□□□□□ -1.03
C9orf43-201ENST00000288462 DIRAS3O95661 229 aa8.59□□□□□ -1.03
C9orf43-201ENST00000288462 IFNA7P01567 189 aa8.59□□□□□ -1.03
C9orf43-201ENST00000288462 LMO1P25800 156 aa8.59□□□□□ -1.03
C9orf43-201ENST00000288462 KLF3P57682 345 aaPredicted RBP8.59□□□□□ -1.03
C9orf43-201ENST00000288462 RND3P61587 244 aa8.59□□□□□ -1.03
C9orf43-201ENST00000288462 RPS23P62266 143 aaKnown RBP8.59□□□□□ -1.03
C9orf43-201ENST00000288462 IL15RAQ13261 267 aa8.59□□□□□ -1.03
C9orf43-201ENST00000288462 EXOSC2Q13868 293 aaKnown RBP8.59□□□□□ -1.03
C9orf43-201ENST00000288462 PCSK4Q6UW60 755 aa8.59□□□□□ -1.03
C9orf43-201ENST00000288462 ACP7Q6ZNF0 438 aa8.59□□□□□ -1.03
C9orf43-201ENST00000288462 ZNF546Q86UE3 836 aa8.59□□□□□ -1.03
C9orf43-201ENST00000288462 LRTM2Q8N967 370 aa8.59□□□□□ -1.03
C9orf43-201ENST00000288462 CCDC71LQ8N9Z2 235 aa8.59□□□□□ -1.03
C9orf43-201ENST00000288462 PRR7Q8TB68 274 aa8.59□□□□□ -1.03
C9orf43-201ENST00000288462 RTN4IP1Q8WWV3 396 aaPredicted RBP8.59□□□□□ -1.03
C9orf43-201ENST00000288462 MFFQ9GZY8 342 aa8.59□□□□□ -1.03
C9orf43-201ENST00000288462 C13orf42A0A1B0GVH6 325 aa8.59□□□□□ -1.03
C9orf43-201ENST00000288462 MPTX1A8MV57 137 aa8.59□□□□□ -1.03
C9orf43-201ENST00000288462 C16orf97H3BN30 126 aa8.59□□□□□ -1.03
C9orf43-201ENST00000288462 ERVH48-1M5A8F1 160 aa8.59□□□□□ -1.03
C9orf43-201ENST00000288462 WNT9BO14905 357 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms