RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 ZNF281Q9Y2X9 895 aa11.22□□□□□ -0.61
TPM1-202ENST00000288398 MOB4Q9Y3A3 225 aa11.22□□□□□ -0.61
TPM1-202ENST00000288398 GMPPBQ9Y5P6 360 aa11.22□□□□□ -0.61
TPM1-202ENST00000288398 HSPE1-MOB4S4R3N1 261 aa11.22□□□□□ -0.61
TPM1-202ENST00000288398 KBTBD11-OT1A0A1B0GTJ5 212 aa11.21□□□□□ -0.61
TPM1-202ENST00000288398 PSMB11A5LHX3 300 aa11.21□□□□□ -0.61
TPM1-202ENST00000288398 OR4C45A6NMZ5 311 aa11.21□□□□□ -0.61
TPM1-202ENST00000288398 MPZL2O60487 215 aa11.21□□□□□ -0.61
TPM1-202ENST00000288398 ALPLP05186 524 aa11.21□□□□□ -0.61
TPM1-202ENST00000288398 RAB3AP20336 220 aa11.21□□□□□ -0.61
TPM1-202ENST00000288398 ALDH3A2P51648 485 aa11.21□□□□□ -0.61
TPM1-202ENST00000288398 GALEQ14376 348 aa11.21□□□□□ -0.61
TPM1-202ENST00000288398 RSU1Q15404 277 aa11.21□□□□□ -0.61
TPM1-202ENST00000288398 ZNF691Q5VV52 312 aa11.21□□□□□ -0.61
TPM1-202ENST00000288398 LPCAT4Q643R3 524 aa11.21□□□□□ -0.61
TPM1-202ENST00000288398 LHFPL3Q86UP9 236 aa11.21□□□□□ -0.61
TPM1-202ENST00000288398 SYS1Q8N2H4 156 aa11.21□□□□□ -0.61
TPM1-202ENST00000288398 WFDC9Q8NEX5 89 aa11.21□□□□□ -0.61
TPM1-202ENST00000288398 HAVCR2Q8TDQ0 301 aa11.21□□□□□ -0.61
TPM1-202ENST00000288398 COQ2Q96H96 371 aa11.21□□□□□ -0.61
TPM1-202ENST00000288398 INPP5EQ9NRR6 644 aa11.21□□□□□ -0.61
TPM1-202ENST00000288398 DSCAML1Q8TD84 2053 aa11.21□□□□□ -0.62
TPM1-202ENST00000288398 J3QRE1 110 aa11.2□□□□□ -0.62
TPM1-202ENST00000288398 CD2P06729 351 aa11.2□□□□□ -0.62
TPM1-202ENST00000288398 GDNFP39905 211 aa11.2□□□□□ -0.62
TPM1-202ENST00000288398 MADCAM1Q13477 382 aa11.2□□□□□ -0.62
TPM1-202ENST00000288398 LTC4SQ16873 150 aa11.2□□□□□ -0.62
TPM1-202ENST00000288398 DEFB121Q5J5C9 76 aa11.2□□□□□ -0.62
TPM1-202ENST00000288398 ZFP1Q6P2D0 407 aa11.2□□□□□ -0.62
TPM1-202ENST00000288398 Q6P435 159 aa11.2□□□□□ -0.62
TPM1-202ENST00000288398 C10orf67Q8IYJ2 551 aa11.2□□□□□ -0.62
TPM1-202ENST00000288398 OSR2Q8N2R0 312 aa11.2□□□□□ -0.62
TPM1-202ENST00000288398 OR10X1Q8NGY0 326 aa11.2□□□□□ -0.62
TPM1-202ENST00000288398 TNFAIP8L1Q8WVP5 186 aa11.2□□□□□ -0.62
TPM1-202ENST00000288398 RNF166Q96A37 237 aaPredicted RBP11.2□□□□□ -0.62
TPM1-202ENST00000288398 LGALS12Q96DT0 336 aa11.2□□□□□ -0.62
TPM1-202ENST00000288398 S100A13Q99584 98 aa11.2□□□□□ -0.62
TPM1-202ENST00000288398 ZNF649Q9BS31 505 aa11.2□□□□□ -0.62
TPM1-202ENST00000288398 PPIL3Q9H2H8 161 aaKnown RBP11.2□□□□□ -0.62
TPM1-202ENST00000288398 CALYQ9NYX4 217 aa11.2□□□□□ -0.62
TPM1-202ENST00000288398 KIF25Q9UIL4 384 aa11.2□□□□□ -0.62
TPM1-202ENST00000288398 EXOGQ9Y2C4 368 aaKnown RBP11.2□□□□□ -0.62
TPM1-202ENST00000288398 A0A087X0M5 115 aa11.19□□□□□ -0.62
TPM1-202ENST00000288398 A0A1B0GX30 115 aa11.19□□□□□ -0.62
TPM1-202ENST00000288398 SH2D7A6NKC9 451 aaPredicted RBP11.19□□□□□ -0.62
TPM1-202ENST00000288398 NUDT19A8MXV4 375 aa11.19□□□□□ -0.62
TPM1-202ENST00000288398 E9PQ18 207 aa11.19□□□□□ -0.62
TPM1-202ENST00000288398 TMEM11P17152 192 aa11.19□□□□□ -0.62
TPM1-202ENST00000288398 KCNJ3P48549 501 aa11.19□□□□□ -0.62
TPM1-202ENST00000288398 SLC35B1P78383 322 aa11.19□□□□□ -0.62
TPM1-202ENST00000288398 ZSCAN26Q16670 478 aa11.19□□□□□ -0.62
TPM1-202ENST00000288398 PARP16Q8N5Y8 322 aa11.19□□□□□ -0.62
TPM1-202ENST00000288398 OR56B4Q8NH76 319 aa11.19□□□□□ -0.62
TPM1-202ENST00000288398 KIRREL1Q96J84 757 aa11.19□□□□□ -0.62
TPM1-202ENST00000288398 FAM118AQ9NWS6 357 aa11.19□□□□□ -0.62
TPM1-202ENST00000288398 IDI2-AS1Q9NZ38 188 aa11.19□□□□□ -0.62
TPM1-202ENST00000288398 SERPINE3A8MV23 424 aa11.18□□□□□ -0.62
TPM1-202ENST00000288398 J3QR06 171 aa11.18□□□□□ -0.62
TPM1-202ENST00000288398 RRP9O43818 475 aaKnown RBP11.18□□□□□ -0.62
TPM1-202ENST00000288398 ZFPL1O95159 310 aa11.18□□□□□ -0.62
TPM1-202ENST00000288398 IL1AP01583 271 aa11.18□□□□□ -0.62
TPM1-202ENST00000288398 IGHV3-7P01780 117 aa11.18□□□□□ -0.62
TPM1-202ENST00000288398 CSTBP04080 98 aaKnown RBP11.18□□□□□ -0.62
TPM1-202ENST00000288398 SNRNP70P08621 437 aaKnown RBP11.18□□□□□ -0.62
TPM1-202ENST00000288398 GNG10P50151 68 aa11.18□□□□□ -0.62
TPM1-202ENST00000288398 RAB7AP51149 207 aa11.18□□□□□ -0.62
TPM1-202ENST00000288398 ZP1P60852 638 aa11.18□□□□□ -0.62
TPM1-202ENST00000288398 PPP3R1P63098 170 aa11.18□□□□□ -0.62
TPM1-202ENST00000288398 RAB40BQ12829 278 aa11.18□□□□□ -0.62
TPM1-202ENST00000288398 IL13RA2Q14627 380 aa11.18□□□□□ -0.62
TPM1-202ENST00000288398 CDK5R1Q15078 307 aa11.18□□□□□ -0.62
TPM1-202ENST00000288398 C17orf58Q2M2W7 97 aa11.18□□□□□ -0.62
TPM1-202ENST00000288398 TCTEX1D4Q5JR98 221 aa11.18□□□□□ -0.62
TPM1-202ENST00000288398 THNSL2Q86YJ6 484 aa11.18□□□□□ -0.62
TPM1-202ENST00000288398 FOXRED2Q8IWF2 684 aa11.18□□□□□ -0.62
TPM1-202ENST00000288398 CBR4Q8N4T8 237 aa11.18□□□□□ -0.62
TPM1-202ENST00000288398 PXT1Q8NFP0 134 aa11.18□□□□□ -0.62
TPM1-202ENST00000288398 OR51T1Q8NGJ9 327 aa11.18□□□□□ -0.62
TPM1-202ENST00000288398 CNIH3Q8TBE1 160 aa11.18□□□□□ -0.62
TPM1-202ENST00000288398 MRGPRDQ8TDS7 321 aa11.18□□□□□ -0.62
TPM1-202ENST00000288398 CHPT1Q8WUD6 406 aa11.18□□□□□ -0.62
TPM1-202ENST00000288398 PDCD1LG2Q9BQ51 273 aa11.18□□□□□ -0.62
TPM1-202ENST00000288398 ISG20L2Q9H9L3 353 aaKnown RBP11.18□□□□□ -0.62
TPM1-202ENST00000288398 RPL36Q9Y3U8 105 aaKnown RBP11.18□□□□□ -0.62
TPM1-202ENST00000288398 LY6LH3BQJ8 138 aa11.17□□□□□ -0.62
TPM1-202ENST00000288398 HTR3BO95264 441 aa11.17□□□□□ -0.62
TPM1-202ENST00000288398 SOX2P48431 317 aa11.17□□□□□ -0.62
TPM1-202ENST00000288398 KLHL22Q53GT1 634 aa11.17□□□□□ -0.62
TPM1-202ENST00000288398 ELP2Q6IA86 826 aa11.17□□□□□ -0.62
TPM1-202ENST00000288398 SLC16A12Q6ZSM3 486 aa11.17□□□□□ -0.62
TPM1-202ENST00000288398 RNF144BQ7Z419 303 aa11.17□□□□□ -0.62
TPM1-202ENST00000288398 OR8H3Q8N146 312 aa11.17□□□□□ -0.62
TPM1-202ENST00000288398 DRAM1Q8N682 238 aa11.17□□□□□ -0.62
TPM1-202ENST00000288398 OR10A7Q8NGE5 316 aa11.17□□□□□ -0.62
TPM1-202ENST00000288398 OR13A1Q8NGR1 328 aa11.17□□□□□ -0.62
TPM1-202ENST00000288398 GPR148Q8TDV2 347 aa11.17□□□□□ -0.62
TPM1-202ENST00000288398 NEK7Q8TDX7 302 aa11.17□□□□□ -0.62
TPM1-202ENST00000288398 LEAP2Q969E1 77 aa11.17□□□□□ -0.62
TPM1-202ENST00000288398 MCRIP2Q9BUT9 160 aaKnown RBP11.17□□□□□ -0.62
TPM1-202ENST00000288398 C9orf16Q9BUW7 83 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms