RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 PLEKHJ1Q9NW61 149 aa8.99□□□□□ -0.97
SKA1-201ENST00000285116 NCOA6Q14686 2063 aaPredicted RBP8.99□□□□□ -0.97
SKA1-201ENST00000285116 A8MWP6 167 aa8.99□□□□□ -0.97
SKA1-201ENST00000285116 C9J4A7 227 aa8.99□□□□□ -0.97
SKA1-201ENST00000285116 M0R135 149 aa8.99□□□□□ -0.97
SKA1-201ENST00000285116 DVL1O14640 695 aa8.99□□□□□ -0.97
SKA1-201ENST00000285116 ST8SIA3O43173 380 aa8.99□□□□□ -0.97
SKA1-201ENST00000285116 DHHO43323 396 aa8.99□□□□□ -0.97
SKA1-201ENST00000285116 XRCC2O43543 280 aa8.99□□□□□ -0.97
SKA1-201ENST00000285116 DIRAS3O95661 229 aa8.99□□□□□ -0.97
SKA1-201ENST00000285116 CFIP05156 583 aa8.99□□□□□ -0.97
SKA1-201ENST00000285116 KLK2P20151 261 aa8.99□□□□□ -0.97
SKA1-201ENST00000285116 RGS19P49795 217 aa8.99□□□□□ -0.97
SKA1-201ENST00000285116 NHLH2Q02577 135 aa8.99□□□□□ -0.97
SKA1-201ENST00000285116 USF2Q15853 346 aaPredicted RBP8.99□□□□□ -0.97
SKA1-201ENST00000285116 HAGHQ16775 308 aa8.99□□□□□ -0.97
SKA1-201ENST00000285116 TMEM176BQ3YBM2 270 aaPredicted RBP8.99□□□□□ -0.97
SKA1-201ENST00000285116 FAM69BQ5VUD6 431 aa8.99□□□□□ -0.97
SKA1-201ENST00000285116 LIAT1Q6ZQX7 453 aa8.99□□□□□ -0.97
SKA1-201ENST00000285116 LHFPL2Q6ZUX7 228 aa8.99□□□□□ -0.97
SKA1-201ENST00000285116 C6orf201Q7Z4U5 140 aa8.99□□□□□ -0.97
SKA1-201ENST00000285116 C20orf196Q8IYI0 205 aa8.99□□□□□ -0.97
SKA1-201ENST00000285116 C1orf87Q8N0U7 546 aa8.99□□□□□ -0.97
SKA1-201ENST00000285116 BEND2Q8NDZ0 799 aa8.99□□□□□ -0.97
SKA1-201ENST00000285116 ZNF799Q96GE5 643 aa8.99□□□□□ -0.97
SKA1-201ENST00000285116 RCC1LQ96I51 464 aaKnown RBP8.99□□□□□ -0.97
SKA1-201ENST00000285116 FAM210BQ96KR6 192 aa8.99□□□□□ -0.97
SKA1-201ENST00000285116 TECTBQ96PL2 329 aa8.99□□□□□ -0.97
SKA1-201ENST00000285116 SF3B5Q9BWJ5 86 aaKnown RBP8.99□□□□□ -0.97
SKA1-201ENST00000285116 ZNF728P0DKX0 622 aa8.98□□□□□ -0.97
SKA1-201ENST00000285116 DUSP1P28562 367 aa8.98□□□□□ -0.97
SKA1-201ENST00000285116 CEBPGP53567 150 aa8.98□□□□□ -0.97
SKA1-201ENST00000285116 ZNF266Q14584 549 aa8.98□□□□□ -0.97
SKA1-201ENST00000285116 JOSD1Q15040 202 aaPredicted RBP8.98□□□□□ -0.97
SKA1-201ENST00000285116 PHYHD1Q5SRE7 291 aa8.98□□□□□ -0.97
SKA1-201ENST00000285116 DTX1Q86Y01 620 aa8.98□□□□□ -0.97
SKA1-201ENST00000285116 OR2G3Q8NGZ4 309 aa8.98□□□□□ -0.97
SKA1-201ENST00000285116 MOB3AQ96BX8 217 aa8.98□□□□□ -0.97
SKA1-201ENST00000285116 MSI2Q96DH6 328 aaKnown RBP8.98□□□□□ -0.97
SKA1-201ENST00000285116 NDUFAF3Q9BU61 184 aa8.98□□□□□ -0.97
SKA1-201ENST00000285116 LIME1Q9H400 295 aa8.98□□□□□ -0.97
SKA1-201ENST00000285116 SH2D2AQ9NP31 389 aa8.98□□□□□ -0.97
SKA1-201ENST00000285116 ZNF701Q9NV72 531 aaPredicted RBP8.98□□□□□ -0.97
SKA1-201ENST00000285116 PITPNC1Q9UKF7 332 aa8.98□□□□□ -0.97
SKA1-201ENST00000285116 SCAF4O95104 1147 aaKnown RBP8.98□□□□□ -0.97
SKA1-201ENST00000285116 CST2P09228 141 aa8.98□□□□□ -0.97
SKA1-201ENST00000285116 PIGPP57054 158 aa8.98□□□□□ -0.97
SKA1-201ENST00000285116 NUTF2P61970 127 aaKnown RBP8.98□□□□□ -0.97
SKA1-201ENST00000285116 SRPXP78539 464 aa8.98□□□□□ -0.97
SKA1-201ENST00000285116 RELQ04864 619 aaPredicted RBP8.98□□□□□ -0.97
SKA1-201ENST00000285116 ZNF506Q5JVG8 444 aa8.98□□□□□ -0.97
SKA1-201ENST00000285116 MRPL14Q6P1L8 145 aaKnown RBP8.98□□□□□ -0.97
SKA1-201ENST00000285116 FBXW12Q6X9E4 464 aa8.98□□□□□ -0.97
SKA1-201ENST00000285116 FAM185AQ8N0U4 392 aa8.98□□□□□ -0.97
SKA1-201ENST00000285116 RNASEH2CQ8TDP1 164 aaKnown RBP8.98□□□□□ -0.97
SKA1-201ENST00000285116 MRPL37Q9BZE1 423 aaKnown RBP8.98□□□□□ -0.97
SKA1-201ENST00000285116 AK3Q9UIJ7 227 aa8.98□□□□□ -0.97
SKA1-201ENST00000285116 LIPGQ9Y5X9 500 aa8.98□□□□□ -0.97
SKA1-201ENST00000285116 WSB1Q9Y6I7 421 aa8.98□□□□□ -0.97
SKA1-201ENST00000285116 FAM230AA0A1W2PPH8 454 aa8.98□□□□□ -0.97
SKA1-201ENST00000285116 PHOX2AO14813 284 aa8.98□□□□□ -0.97
SKA1-201ENST00000285116 SYNGR3O43761 229 aa8.98□□□□□ -0.97
SKA1-201ENST00000285116 SCRG1O75711 98 aa8.98□□□□□ -0.97
SKA1-201ENST00000285116 ICAM4Q14773 271 aa8.98□□□□□ -0.97
SKA1-201ENST00000285116 OR8G1Q15617 311 aa8.98□□□□□ -0.97
SKA1-201ENST00000285116 SP5Q6BEB4 398 aaPredicted RBP8.98□□□□□ -0.97
SKA1-201ENST00000285116 LGI3Q8N145 548 aa8.98□□□□□ -0.97
SKA1-201ENST00000285116 GPR137CQ8N3F9 429 aa8.98□□□□□ -0.97
SKA1-201ENST00000285116 CYB561D1Q8N8Q1 229 aa8.98□□□□□ -0.97
SKA1-201ENST00000285116 Q8NFD4 153 aa8.98□□□□□ -0.97
SKA1-201ENST00000285116 OR5D18Q8NGL1 313 aa8.98□□□□□ -0.97
SKA1-201ENST00000285116 OR4D5Q8NGN0 318 aa8.98□□□□□ -0.97
SKA1-201ENST00000285116 CRLF2Q9HC73 371 aa8.98□□□□□ -0.97
SKA1-201ENST00000285116 NXT1Q9UKK6 140 aaKnown RBP8.98□□□□□ -0.97
SKA1-201ENST00000285116 RARRES3Q9UL19 164 aa8.98□□□□□ -0.97
SKA1-201ENST00000285116 ATRXP46100 2492 aa8.97□□□□□ -0.97
SKA1-201ENST00000285116 SPTAN1Q13813 2472 aaKnown RBP8.97□□□□□ -0.97
SKA1-201ENST00000285116 CDS2O95674 445 aa8.97□□□□□ -0.97
SKA1-201ENST00000285116 SFTPDP35247 375 aa8.97□□□□□ -0.97
SKA1-201ENST00000285116 DSCR4P56555 118 aaPredicted RBP8.97□□□□□ -0.97
SKA1-201ENST00000285116 HLA-DRB3P79483 266 aa8.97□□□□□ -0.97
SKA1-201ENST00000285116 EWSR1Q01844 656 aaKnown RBP eCLIP8.97□□□□□ -0.97
SKA1-201ENST00000285116 GNMTQ14749 295 aa8.97□□□□□ -0.97
SKA1-201ENST00000285116 LYZL2Q7Z4W2 148 aa8.97□□□□□ -0.97
SKA1-201ENST00000285116 MAML2Q8IZL2 1156 aaPredicted RBP8.97□□□□□ -0.97
SKA1-201ENST00000285116 CCDC71LQ8N9Z2 235 aa8.97□□□□□ -0.97
SKA1-201ENST00000285116 ZNF700Q9H0M5 742 aa8.97□□□□□ -0.97
SKA1-201ENST00000285116 TMEM242Q9NWH2 141 aa8.97□□□□□ -0.97
SKA1-201ENST00000285116 WASF3Q9UPY6 502 aa8.97□□□□□ -0.97
SKA1-201ENST00000285116 PIEZO1Q92508 2521 aa8.97□□□□□ -0.97
SKA1-201ENST00000285116 DUXBA0A1W2PPF3 345 aa8.97□□□□□ -0.97
SKA1-201ENST00000285116 FAM90A10PA6NDY2 464 aa8.97□□□□□ -0.97
SKA1-201ENST00000285116 FAM90A18PA6NE21 464 aa8.97□□□□□ -0.97
SKA1-201ENST00000285116 FAM90A16PA6NEW6 464 aa8.97□□□□□ -0.97
SKA1-201ENST00000285116 OR6C6A6NF89 314 aa8.97□□□□□ -0.97
SKA1-201ENST00000285116 FAM90A20PA6NIJ5 464 aa8.97□□□□□ -0.97
SKA1-201ENST00000285116 FAM90A8PA6NJQ4 464 aa8.97□□□□□ -0.97
SKA1-201ENST00000285116 FAM90A7PA6NKC0 464 aa8.97□□□□□ -0.97
SKA1-201ENST00000285116 FAM90A22PA8MWA6 464 aa8.97□□□□□ -0.97
SKA1-201ENST00000285116 FAM90A12PA8MX19 464 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms